| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,341,570 | Δ1 bp | pseudogene (530/957 nt) | PA14_RS10890 → | DUF58 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,341,568 | 0 | C | . | 97.8% | 1886.9 / 35.3 | 401 | pseudogene (528/957 nt) | PA14_RS10890 | DUF58 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (8/1); new base . (210/182); total (218/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 422 total aligned reads displayed.
GGAATACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACT > NC_008463/2341418‑2341716 | ggAATACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTgcgc > 2:4105834/1‑151 (MQ=255) gAATACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGcc > 1:2375137/1‑151 (MQ=255) aaTACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGcca > 1:9741502/1‑150 (MQ=255) aaTACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTGCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGcca > 2:8345749/1‑150 (MQ=255) aaTACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTACCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGcccca < 1:6934342/151‑2 (MQ=255) aTACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCGGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCGCGGCCTGCGGGTGGCCTGGAGCTGGGTCGACCTGCGccag > 2:9058527/1‑149 (MQ=255) tACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGccagc > 2:2705512/1‑148 (MQ=255) gCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTgcgcaagcagg < 2:738435/151‑8 (MQ=255) gCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAgg < 2:8422745/151‑1 (MQ=255) ccGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGgc < 2:4237917/151‑1 (MQ=255) cGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGgcg > 1:1697619/1‑151 (MQ=255) cGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGgcg < 1:4595663/151‑1 (MQ=255) ggCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTc < 1:8698924/151‑1 (MQ=255) ggCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTc > 1:9170179/1‑151 (MQ=255) gCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCt < 2:9549147/151‑1 (MQ=255) gCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCt > 2:463601/1‑151 (MQ=255) aGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTAc < 1:7229149/151‑1 (MQ=255) ggCGACGCGGCTGCCGAGGTCCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTATCCCCTCGGCCTGCGGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCAAcc > 2:7000524/1‑151 (MQ=255) gCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTAccc < 1:5595302/151‑1 (MQ=255) gACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTc > 1:9517705/1‑151 (MQ=255) aCGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCg < 1:6266391/151‑1 (MQ=255) aCGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCg < 1:5725148/151‑1 (MQ=255) cgGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGcc < 2:115089/151‑1 (MQ=255) ggCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGTGAGTCGCTTTCCCCGCGGGCTGCTGGTGGCCTGGGGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCg > 1:2828632/1‑151 (MQ=255) ggCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCGGGTGGCCTGGAGCTGGGTCGACCTGCGCCC‑GCAGGCGCTGGTCTACCCTCGGCCg > 2:7791370/1‑151 (MQ=255) tGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTg < 2:3649500/151‑1 (MQ=255) gCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTgg < 2:4988770/151‑1 (MQ=255) aGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCgg > 1:7044405/1‑151 (MQ=255) aGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCgg > 1:8837160/1‑151 (MQ=255) tgctgcTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGTCCTGCG‑CCAGCCGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCgg > 2:7614503/1‑150 (MQ=255) tgctgcTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGa > 1:4328879/1‑151 (MQ=255) tgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccgtt > 1:4472578/1‑148 (MQ=255) cACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCGCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCG‑GGCCGGTCCTcg > 1:3960925/1‑151 (MQ=255) aCCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTcgc < 2:10422641/151‑1 (MQ=255) aCCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTcgc > 1:1192222/1‑151 (MQ=255) cccGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTcgcg > 1:9394561/1‑151 (MQ=255) cccGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTcgcg < 1:7734942/151‑1 (MQ=255) gaccgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTGGCGCCg > 1:509058/1‑151 (MQ=255) gaccgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCg < 2:685271/151‑1 (MQ=255) accgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCGTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGGCTACCCTCGGCCGCTGGCCGGGGAG‑CCGTTCCTCGCGCCgg > 1:4901967/1‑151 (MQ=255) gaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgcg < 2:5519728/151‑1 (MQ=255) gaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCGGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTGCGCGCGCCGGgcg > 1:1350560/1‑151 (MQ=255) aGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgcgc > 1:4136836/1‑151 (MQ=255) aGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCACGGCCTGCGGGTGGGCGGGAGCTGGGTCGACCTGCG‑CCAGCCGTCGCTGGTCTACCCGCGGCCGCAGGCCGGCGTGCCC‑TTCCTCGCGCCGGgcgc > 1:4692255/1‑151 (MQ=255) aCGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCAGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCggag > 2:10125854/1‑151 (MQ=255) cgcgGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCggagg < 1:9870117/151‑1 (MQ=255) gcgGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCggagga > 2:4825589/1‑151 (MQ=255) cgGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGAt > 1:9019939/1‑151 (MQ=255) ggctggctGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATg < 1:3426580/151‑1 (MQ=255) gctggctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGc < 1:10506770/151‑1 (MQ=255) tggctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCg < 1:6329125/151‑1 (MQ=255) tggctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCg < 1:82560/151‑1 (MQ=255) tgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGa < 1:5966810/151‑1 (MQ=255) ggCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCa > 2:1781465/1‑151 (MQ=255) ggCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCa < 2:403316/151‑1 (MQ=255) cGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCGGGAGCTGGGTCGACCGGCG‑CCAGCAGGCGCTGGGCTACCCGCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGGGGCTGCCGTGGACCCggg > 1:8324588/1‑151 (MQ=255) gggCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgc < 2:9290065/151‑1 (MQ=255) gggCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCGGCGGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGGCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGCTGCCGAGGACCCGGGgc > 1:8631653/1‑151 (MQ=255) gcCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgcgcgc < 1:2554239/151‑1 (MQ=255) ccTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGCCC‑GCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCGCGCGCCGGGCGCGGAGGATGCCGAGGCCCCGGGgcgcgcg > 2:3915714/1‑151 (MQ=255) tGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCt > 1:10419803/1‑151 (MQ=255) tGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCt < 2:6205896/151‑1 (MQ=255) gCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTg < 2:442433/151‑1 (MQ=255) ggTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCg < 1:3730967/151‑1 (MQ=255) tGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAg > 2:10328617/1‑151 (MQ=255) ggAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGTGCTGGGTAGACCAGCG‑CCAGCAGGCGCGGGTCTACCCTCGGCCGCTGGCCGGGGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGGCGAGGACCAGGGGCGCGCGCTGGCGGGc > 1:2945235/1‑151 (MQ=255) gagaGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCAGCG‑CCAGCAGGCGCTGGTCTACCCACGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGGGGATGCCGAGGTCCAGGGGCGCGCGCTGGCGAGcc > 1:7444616/1‑150 (MQ=255) agagTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCAc < 1:2268102/151‑1 (MQ=255) agagTCGCTTTCCCCTAGGCCTGCTGGTGGCCTGGAGCTGGGTAGACATGCG‑CCAGCACGCGCGGGTCTACACAAGGCCGGTGGGCGGCGAG‑GCGTTCCGCGCGGCGGGCGCGGAGGATGCCGTGGACCGGGGGCGCGCGGTGGAGAGCAc > 2:8767026/1‑151 (MQ=255) agagTCGCTTTCCCCACGGCCAGCAGGTGGCCAGGAGCTTGGTGGACCAGCG‑CCAGCCGGCGCTGGTAAACCCACCGCCGCAGGCCCGCGAG‑CCGTTCCACGCCCCGGGCGCGGAGGGTGCCGCGGACCAGGGGCGCGCGCTGGCGAGccc > 2:321457/1‑149 (MQ=255) gagTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACg < 2:8021957/151‑1 (MQ=255) ccccTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTcgacg < 1:1077762/151‑1 (MQ=255) cTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCCCGGGCGTCGACGACt > 2:2065626/1‑151 (MQ=255) cTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACt > 2:257210/1‑151 (MQ=255) cTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACt < 2:2995512/151‑1 (MQ=255) cGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTAc > 1:10461426/1‑151 (MQ=255) cGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGCTGCCGAGGACCCGGGGCGCGCGCTGGCGCGCACGGGCGTCGACGACTAc > 2:8556071/1‑151 (MQ=255) gCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCa < 2:6407096/151‑1 (MQ=255) ccTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAg > 1:8414602/1‑151 (MQ=255) ccTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAg > 2:6610477/1‑151 (MQ=255) gctgGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGa < 1:10864111/151‑1 (MQ=255) ctgGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGAc > 1:3018832/1‑151 (MQ=255) ctgGGGGCCTGGAGCTGGGTCGCCCTGCGCCC‑GCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGAc < 2:5744450/151‑1 (MQ=255) ggtggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTg < 2:3451537/151‑1 (MQ=255) tggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGTCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGGTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTgcg > 1:6461574/1‑151 (MQ=255) tGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCt < 1:949210/151‑1 (MQ=255) ggAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTa < 1:220748/151‑1 (MQ=255) aGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAcc < 2:9452241/151‑1 (MQ=255) cTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccag < 2:5190185/151‑3 (MQ=255) cTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccag > 2:10886009/1‑149 (MQ=255) tGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagc > 2:2935335/1‑148 (MQ=255) gggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagcc > 2:9632446/1‑147 (MQ=255) gggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagcc < 1:278393/151‑5 (MQ=255) ggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCg < 1:5351902/151‑1 (MQ=255) cGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGc < 2:6670515/151‑1 (MQ=255) ccTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCTGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGAc > 1:10076707/1‑151 (MQ=255) ccTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGGCGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGAc > 1:1997247/1‑151 (MQ=255) ccTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGAc > 2:5365687/1‑151 (MQ=255) ccTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGAc < 1:10317234/151‑1 (MQ=255) cTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACt < 1:8059111/151‑1 (MQ=255) | GGAATACGCCGACCTGGCAGGCGACGCGGCTGCCGAGGTGCTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACT > NC_008463/2341418‑2341716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |