| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 559,051 | +T | intergenic (+619/+70) | PA14_RS02545 → / ← rarD | glycine cleavage system protein R/EamA family transporter RarD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 559,050 | 1 | . | T | 98.7% | 1291.4 / 6.0 | 314 | intergenic (+618/+71) | PA14_RS02545/rarD | glycine cleavage system protein R/EamA family transporter RarD |
| Reads supporting (aligned to +/- strand): ref base . (4/0); new base T (164/145); total (169/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 332 total aligned reads displayed.
ACAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑TGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGATGAA > NC_008463/558900‑559195 | cAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑t < 2:9809162/151‑1 (MQ=255) cAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑t < 2:7001160/151‑1 (MQ=255) aGCGGTGTGCTCAAAGACTGATCAGGAGCTTTGCAGGGCTTCTTCCGACGAGTTATCCTCGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACTAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTTAGT‑A‑tt < 1:5281970/151‑2 (MQ=255) gCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑ttg < 1:6635808/151‑3 (MQ=255) ggTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCCCAAAGTACGTGCATGAACCGGTGGAAGAGCGTGGGGTGGATCGCTGAGCGTCAGT‑A‑ttggc > 2:7906115/1‑147 (MQ=255) gtgtGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑ttggcg < 1:1769579/151‑6 (MQ=255) tgtgCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCgg < 2:10997152/151‑1 (MQ=255) gtgCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCggg > 1:9252239/1‑151 (MQ=255) gtgCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCggg < 2:8133292/151‑1 (MQ=255) cTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGa < 2:4277268/151‑1 (MQ=255) cTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGa < 1:4362323/151‑1 (MQ=255) tCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTGATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGAt < 1:4617264/151‑1 (MQ=255) aaaGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTCT‑TGGCGGGGGATag > 1:10870193/1‑151 (MQ=255) aaaGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATag < 1:3129107/151‑1 (MQ=255) aaaGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATag > 1:5652652/1‑151 (MQ=255) aaGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATagg > 2:3764440/1‑151 (MQ=255) gACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATaggaa < 1:3557374/151‑1 (MQ=255) cTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATaggaagg < 2:9412043/151‑1 (MQ=255) cTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGG‑ATTGGCGGGGGATaggaagg > 1:5816066/1‑151 (MQ=255) tGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATaggaagga > 2:7036808/1‑151 (MQ=255) gATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAg > 1:9517072/1‑151 (MQ=255) gATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAg > 2:5306403/1‑151 (MQ=255) aTCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGt < 1:9718330/151‑1 (MQ=255) aTCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGt < 1:5448866/151‑1 (MQ=255) cAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGc > 1:4992938/1‑151 (MQ=255) aGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATCGGAAGGAGTGCg > 2:7321362/1‑151 (MQ=255) tttGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGtttt < 1:8799645/151‑1 (MQ=255) ttGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGttttt > 1:4407164/1‑151 (MQ=255) ttGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGttttt > 1:11038796/1‑151 (MQ=255) tGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGtttttt < 1:2278859/151‑1 (MQ=255) cAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCg > 2:399999/1‑151 (MQ=255) gggCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGcc > 2:5104011/1‑151 (MQ=255) gggCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGcc < 2:8490492/151‑1 (MQ=255) gCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGTTAGGAAGGAGTGCGTGTTTTTTCGCCAg > 2:3669859/1‑151 (MQ=255) gCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAg < 2:2155964/151‑1 (MQ=255) gCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAg < 1:5178079/151‑1 (MQ=255) ttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGAGAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTg > 2:7584268/1‑151 (MQ=255) cgacgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCgg < 2:6666145/151‑1 (MQ=255) cgacgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCgg > 2:5886364/1‑151 (MQ=255) gacgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGa < 2:673677/151‑1 (MQ=255) gacgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGG‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGa > 1:8223158/1‑151 (MQ=255) acgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGTAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAg > 2:10274875/1‑151 (MQ=255) gaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGtt > 2:7154469/1‑151 (MQ=255) tATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGc > 1:8683415/1‑151 (MQ=255) tCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCaa < 2:1772512/151‑1 (MQ=255) ccACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGTGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAg > 1:7930900/1‑151 (MQ=255) ccACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGGCAGT‑ATTGGCGGGGGAGAGGAAGGAGTGCGTGTTTTTTCGCCTGGCGTGCGGAGGTCCGctcg > 1:8345368/1‑148 (MQ=255) aCGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGcc > 2:9001416/1‑151 (MQ=255) gcgcCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTg < 1:3256675/151‑1 (MQ=255) gcgcCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCGGAGCGGCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCCGGCTTGCGGAGTTCCGCAAGCCTg > 2:451433/1‑151 (MQ=255) gcCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATTAACCTGTGTAAAAGCCTGGGGTGGATCGCTGAGAGTCAGT‑ATTGTCGGGGGAGAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCAggg > 2:6529964/1‑151 (MQ=255) ccTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTgggg > 2:6194362/1‑151 (MQ=255) tGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGAt < 2:1398073/151‑1 (MQ=255) ggggAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCCGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGAGAAc > 2:7794824/1‑151 (MQ=255) ggaggaGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGt < 2:8778562/151‑1 (MQ=255) aggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTcc > 2:1205610/1‑150 (MQ=255) aggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCa > 1:1219891/1‑151 (MQ=255) ggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAg > 1:2603762/1‑151 (MQ=255) ggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAg > 2:4847788/1‑151 (MQ=255) gaAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGccc < 1:10457226/151‑1 (MQ=255) gaAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGccc > 1:1566389/1‑151 (MQ=255) cAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTg > 1:5958748/1‑151 (MQ=255) cAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTg > 1:3778272/1‑151 (MQ=255) aGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTgg > 2:827066/1‑151 (MQ=255) ggTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTggg < 2:8426152/151‑1 (MQ=255) ggTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTggg < 1:7513873/151‑1 (MQ=255) ggTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGAGAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTggg > 2:9277133/1‑151 (MQ=255) tCTATGCACACAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTCT‑TGGCGGGGGATAGGAAGGAGGGCGTGTTTTGTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGa > 2:283617/1‑151 (MQ=255) gCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAggcg < 1:8946312/151‑1 (MQ=255) aaGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCa < 2:3514234/151‑1 (MQ=255) aGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAg < 2:8951082/151‑1 (MQ=255) aGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAg < 1:1962346/151‑1 (MQ=255) aCGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCt < 2:1556450/151‑1 (MQ=255) cGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTg < 2:73806/151‑1 (MQ=255) gTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGG‑ATTGGCGGGGGCTAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATATCGTCAGCCCGGCTGGGGAAGGCGGCGCTGGCTgc > 2:8887395/1‑151 (MQ=255) gCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTgcgc < 2:1915750/151‑1 (MQ=255) tGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAg < 2:6101807/151‑1 (MQ=255) tGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAg < 1:6179359/151‑1 (MQ=255) aaCCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGc < 1:6071568/151‑1 (MQ=255) aaCCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGc < 1:2742676/151‑1 (MQ=255) cTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTc < 1:11104924/151‑1 (MQ=255) cTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGATTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTc < 2:10073376/151‑1 (MQ=255) tgtgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCg > 1:705979/1‑151 (MQ=255) ggAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAg < 1:3935111/151‑1 (MQ=255) ggAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAg < 2:10519864/151‑1 (MQ=255) ggAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAg < 1:10142004/151‑1 (MQ=255) aaaaGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCt > 1:4099926/1‑151 (MQ=255) ccTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGa > 2:7872111/1‑151 (MQ=255) ccTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGa > 1:2712921/1‑151 (MQ=255) ccTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGa > 1:1366776/1‑151 (MQ=255) tGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACg > 1:10814061/1‑151 (MQ=255) gggTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGc < 1:1279423/151‑1 (MQ=255) ggATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAgg < 1:7571799/151‑1 (MQ=255) cGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGa > 2:7275981/1‑151 (MQ=255) gCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAg > 1:4851934/1‑151 (MQ=255) gCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAg > 2:6388212/1‑151 (MQ=255) gCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAg < 1:7333598/151‑1 (MQ=255) aGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAg > 1:9952503/1‑151 (MQ=255) cGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGAt > 1:4765494/1‑151 (MQ=255) gTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGATg > 2:2784664/1‑151 (MQ=255) | ACAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑TGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGATGAA > NC_008463/558900‑559195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |