Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_008463 | 208,430 | T→G | intergenic (‑36/+52) | atsA ← / ← PA14_RS00940 | arylsulfatase AtsA/ABC transporter ATP‑binding protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 208,430 | 0 | T | G | 99.8% | 2231.4 / NA | 570 | intergenic (‑36/+52) | atsA/PA14_RS00940 | arylsulfatase AtsA/ABC transporter ATP‑binding protein |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (259/310); minor base C (1/0); total (260/310) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 591 total aligned reads displayed.
GCGATGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGTCCGTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAGCGCTTC > NC_008463/208282‑208577 | gCGATGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGcc < 1:5146280/151‑1 (MQ=255) cGATGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGccc > 2:1318656/1‑150 (MQ=255) gATGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGccct < 2:4607371/151‑3 (MQ=255) ggCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTAGGGGCGTTTGCTCATGCGCGGCTCTCGACTGGATGGGAGGAGAGGGTGGGGCCCTCGc > 2:7548664/1‑151 (MQ=255) ccAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGccc > 1:1348109/1‑151 (MQ=255) cAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGcccc > 2:1879002/1‑151 (MQ=255) cAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGcccc > 1:117758/1‑151 (MQ=255) aGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGccccc > 1:6553236/1‑151 (MQ=255) aGGGCGTCGAGGGTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGCTATCGGAGTAGCACAGGTCGTCGGCGACGATCACCCGCACGTGGTGGCGTGTCCTCATGCGCGCGTCTCGGCGGGAGGGGAGGAGAGGGTGGGGCCCTCGccccc > 2:9841922/1‑151 (MQ=255) gTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCt > 1:1441942/1‑151 (MQ=255) gTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGACGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCt < 2:4753195/151‑1 (MQ=255) tCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCtt > 2:2177947/1‑151 (MQ=255) cGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTc < 2:10468115/151‑1 (MQ=255) gAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGACGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGCGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTcc > 2:7003847/1‑151 (MQ=255) gTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGc < 2:3870482/151‑1 (MQ=255) cGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCCGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAgg > 1:8231062/1‑151 (MQ=255) ggCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAggg > 1:6648649/1‑151 (MQ=255) gCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAgggg < 1:10242336/151‑1 (MQ=255) cGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAggggg < 2:7723082/151‑1 (MQ=255) tGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGaa < 2:2896261/151‑1 (MQ=255) cGATCTCGCCGCCGAAGGCGCCGATATCGGAGACGCCCAGGTCGTCGGCGACGATCACCAGGAATTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAgg < 2:5506042/151‑1 (MQ=255) cGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAgg > 1:3755528/1‑151 (MQ=255) gATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAggg > 2:7966442/1‑151 (MQ=255) aTCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGc > 1:4106534/1‑151 (MQ=255) tctcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGcc < 1:11035713/151‑1 (MQ=255) ctcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCa < 2:4088716/151‑1 (MQ=255) tcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCTGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAg < 2:7078891/151‑1 (MQ=255) tcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAg < 1:3450966/151‑1 (MQ=255) cgccgcCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAgg > 2:784568/1‑151 (MQ=255) cgccgcCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAgg < 2:8308372/151‑1 (MQ=255) gccgccGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAggg > 1:3014274/1‑151 (MQ=255) gccgccGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAggg < 2:3388008/151‑1 (MQ=255) gccgccGAAGGCGCCGAGATCGGAGAAGCCCAGGTCGTCGGCGACGATCCCCAGGAAGTTGGCGCGTGTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGACAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAggg < 2:8999896/151‑1 (MQ=255) ccgccgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGc < 2:6649005/151‑1 (MQ=255) ccgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAg > 2:9360303/1‑151 (MQ=255) ccgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAg < 2:8455321/151‑1 (MQ=255) aGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGc > 2:5942185/1‑151 (MQ=255) aGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGCGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGc > 1:9019578/1‑151 (MQ=255) ccGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTAGCTCATGCGCGGGTCTCGTCTGGCTGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTc < 1:5279267/151‑1 (MQ=255) gATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTGTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCGTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAg < 2:10274930/151‑1 (MQ=255) tatCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCa > 1:228071/1‑151 (MQ=255) tatCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCa < 1:6834636/151‑1 (MQ=255) ggAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCCTGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCg < 1:9583617/151‑1 (MQ=255) cccAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAAtt < 1:3232354/151‑1 (MQ=255) aGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGa > 2:5168305/1‑151 (MQ=255) gtcgtcGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGatg > 1:8034223/1‑149 (MQ=255) tcgtcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAgg < 2:8123268/151‑1 (MQ=255) cgtcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAggg < 1:4025691/151‑1 (MQ=255) gtcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGc < 2:1653551/151‑1 (MQ=255) tcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCa < 2:9628220/151‑1 (MQ=255) cgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAg < 1:2493458/151‑1 (MQ=255) cgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAg > 1:10835016/1‑151 (MQ=255) gCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGt < 2:7633626/151‑1 (MQ=255) gCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGt < 2:10077379/151‑1 (MQ=255) cgccgaTCACCAGGCAGATGGGGCGTTTGCTCATGCGCGGGGCTCGTCGGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGtt < 1:881111/148‑1 (MQ=255) gacgaTCACGAGGTAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCGGGATGGGAGGTGTGGGTGGGGCCCTCGCGCCCGCCCTTCCCGCTGGGGGTCAGGGCGAGGGCAAGGGGCGTTTCAGGAAGCGAGGAATTCGTCGGGCGGGttg > 2:8748859/1‑150 (MQ=255) gacgaTCACCAGGAAGTTGGGGCGTGTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGttt < 2:5704205/151‑1 (MQ=255) acgaTCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGtttt > 2:10743802/1‑151 (MQ=255) gaTCACCTGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGTTGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCGTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTcc < 1:9947063/151‑1 (MQ=255) aTCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCa < 2:8919459/151‑1 (MQ=255) aTCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCa < 1:5789812/151‑1 (MQ=255) cACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCAcc < 2:1459345/151‑1 (MQ=255) cACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCAcc < 2:2323070/151‑1 (MQ=255) cACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCAcc < 1:6320100/151‑1 (MQ=255) aCCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCAccc < 2:10165213/151‑1 (MQ=255) ccAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCg < 1:4412020/151‑1 (MQ=255) cAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGt < 1:6462260/151‑1 (MQ=255) cAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGt > 1:6063816/1‑151 (MQ=255) aaGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTcgcg < 1:9376197/151‑1 (MQ=255) gTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcggc < 1:10594144/151‑1 (MQ=255) gTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcggc > 1:2393172/1‑151 (MQ=255) tGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcggcgg > 1:9722258/1‑151 (MQ=255) ggCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcggcggcgg > 1:9170432/1‑151 (MQ=255) cGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcggcggcggcg > 1:4809206/1‑151 (MQ=255) gTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGgcgc > 2:6327226/1‑151 (MQ=255) gTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGgcgc < 1:7144210/151‑1 (MQ=255) tttGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGcgcg < 1:7939366/151‑1 (MQ=255) tGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGAc > 2:9207812/1‑151 (MQ=255) aTGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGACTTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACt > 1:7454262/1‑151 (MQ=255) aTGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACt < 2:10400737/151‑1 (MQ=255) gcgGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGCAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGcc < 1:4718943/151‑1 (MQ=255) gcgGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGcc < 2:4960437/151‑1 (MQ=255) cgGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGGTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCg > 1:1953072/1‑151 (MQ=255) gggTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGt > 2:7369477/1‑151 (MQ=255) gggTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGt < 1:3892685/151‑1 (MQ=255) gTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcg > 1:2080227/1‑151 (MQ=255) tctcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcgg < 1:4584419/151‑1 (MQ=255) tctcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcgg < 1:294152/151‑1 (MQ=255) tctcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCGTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcgg < 2:3212048/151‑1 (MQ=255) tcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcggcg < 1:8401985/151‑1 (MQ=255) tcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcggcg < 2:3585440/151‑1 (MQ=255) gTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCCCCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcggcggg > 2:4356211/1‑150 (MQ=255) tCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTc < 1:2758039/151‑1 (MQ=255) tGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAg > 2:11046372/1‑151 (MQ=255) tGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCg < 1:10163656/151‑1 (MQ=255) aggagAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgca > 1:756915/1‑151 (MQ=255) ggagAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgcag < 2:2496791/151‑1 (MQ=255) agGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCagcagc > 2:9087588/1‑151 (MQ=255) gggtggggCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAgcg < 1:10044639/151‑1 (MQ=255) tggggCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAGCGCtt > 2:6045950/1‑151 (MQ=255) | GCGATGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGTCCGTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAGCGCTTC > NC_008463/208282‑208577 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |