Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 966,217 T→C intergenic (+77/‑568) PA14_RS04485 → / → PA14_RS04490 fimbrial protein/response regulator transcription factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_008463966,2170TC100.0% 1814.9 / NA 466intergenic (+77/‑568)PA14_RS04485/PA14_RS04490fimbrial protein/response regulator transcription factor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (209/257);  total (209/257)

Only 100 of 469 total aligned reads displayed.

ATCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG  >  NC_008463/966069‑966364
                                                                                                                                                    |                                                                                                                                                   
aTCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGc                                                                                                                                                   >  1:755257/1‑151 (MQ=255)
aTCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGc                                                                                                                                                   <  1:9525771/151‑1 (MQ=255)
 tCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTcgcg                                                                                                                                                  <  1:4033698/151‑1 (MQ=255)
 tCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTcgcg                                                                                                                                                  <  1:2630384/151‑1 (MQ=255)
         gAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTGTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCg                                                                                                                                          <  2:3381746/151‑1 (MQ=255)
          aGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCTCGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCGCGCGAAGGCTCgg                                                                                                                                         >  2:1319823/1‑151 (MQ=255)
            ggCGAATTGACGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTCCCTTCCCCGGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGcc                                                                                                                                       <  1:2074216/151‑1 (MQ=255)
            ggCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGcc                                                                                                                                       <  1:2283782/151‑1 (MQ=255)
             gCGAATTGCAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGccc                                                                                                                                      <  1:10232115/151‑1 (MQ=255)
                 aTTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCa                                                                                                                                  >  2:10963506/1‑151 (MQ=255)
                    gAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCt                                                                                                                               <  1:788995/151‑1 (MQ=255)
                      aGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTcc                                                                                                                             >  2:4667783/1‑151 (MQ=255)
                      aGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTcc                                                                                                                             <  2:4997045/151‑1 (MQ=255)
                        gCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAg                                                                                                                           <  2:8726809/151‑1 (MQ=255)
                        gCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTGCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAg                                                                                                                           <  2:6051441/151‑1 (MQ=255)
                          cGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTg                                                                                                                         >  1:10520007/1‑151 (MQ=255)
                                cGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGCGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTGGCa                                                                                                                   <  1:935195/151‑1 (MQ=255)
                                cGCCGACGGCGCCGCCGAGTTCACGTGTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCa                                                                                                                   <  1:6386260/151‑1 (MQ=255)
                                 gCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAg                                                                                                                  <  1:2022801/151‑1 (MQ=255)
                                    gACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTGGCAGATc                                                                                                               >  1:7503431/1‑151 (MQ=255)
                                    gACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTCCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATc                                                                                                               >  1:1278365/1‑151 (MQ=255)
                                     aCGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCg                                                                                                              >  1:3117433/1‑151 (MQ=255)
                                     aCGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGGTGCAGAtag                                                                                                              >  1:8493205/1‑149 (MQ=255)
                                      cGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGAACGc                                                                                                             >  1:10001936/1‑151 (MQ=255)
                                         cgccgcCGAGTTCACGATTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGa                                                                                                          <  2:6717713/151‑1 (MQ=255)
                                            cgccgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAgg                                                                                                       <  1:6183022/151‑1 (MQ=255)
                                              ccgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGAAGgcg                                                                                                     >  2:1644312/1‑151 (MQ=255)
                                                 aGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTGGTTGCAGATAGCCGAATGCGctc                                                                                                  >  2:4818313/1‑151 (MQ=255)
                                                 aGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGGGGTTGCAGATAGCCGAAGGCGctc                                                                                                  >  2:6846/1‑151 (MQ=255)
                                                   ttCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTg                                                                                                <  1:738990/151‑1 (MQ=255)
                                                      aCGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCat                                                                                             <  1:8666099/151‑1 (MQ=255)
                                                      aCGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCat                                                                                             <  2:96598/151‑1 (MQ=255)
                                                       cGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCata                                                                                            >  2:547928/1‑151 (MQ=255)
                                                       cGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCata                                                                                            >  2:4558996/1‑151 (MQ=255)
                                                          ttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCTCCTCCAGTGGTTGCAGGTCGCCGTATGCGCAGTGCctatag                                                                                         >  2:9359085/1‑149 (MQ=255)
                                                          ttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCg                                                                                         <  1:3456677/151‑1 (MQ=255)
                                                           tACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGc                                                                                        <  1:8772922/151‑1 (MQ=255)
                                                              cTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTcc                                                                                     >  2:9022574/1‑151 (MQ=255)
                                                              cTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTcc                                                                                     <  2:1276633/151‑1 (MQ=255)
                                                               ttCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCg                                                                                    >  2:7806456/1‑151 (MQ=255)
                                                               ttCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCg                                                                                    <  1:4700946/151‑1 (MQ=255)
                                                               gtCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCg                                                                                    <  2:7457549/150‑1 (MQ=255)
                                                                 ccccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCgct                                                                                  <  2:6642665/151‑1 (MQ=255)
                                                                 ccccTGAGCGGCGCCGCCGCACTGTCCCCCGCGTTACCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCgct                                                                                  <  1:3328292/151‑1 (MQ=255)
                                                                  cccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCgctg                                                                                 <  2:10535152/151‑1 (MQ=255)
                                                                   ccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATCGCCGGAGGCGCGCTGCAAATAGCTCCgcggc                                                                                >  1:5004534/1‑151 (MQ=255)
                                                                     tGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTc                                                                              <  1:5648902/151‑1 (MQ=255)
                                                                     tGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTc                                                                              >  2:3135263/1‑151 (MQ=255)
                                                                     tGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCACCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTc                                                                              <  2:7253551/151‑1 (MQ=255)
                                                                       aGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCACCGCTGCTCGt                                                                            >  2:9502271/1‑151 (MQ=255)
                                                                       aGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCAGCATATAGCACCGCAGCTCGt                                                                            >  1:5437442/1‑151 (MQ=255)
                                                                        gcggcgCCGCCGCTCGTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCACGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTc                                                                           <  1:3563876/151‑1 (MQ=255)
                                                                           gcgcCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTg                                                                        <  1:8431461/151‑1 (MQ=255)
                                                                                gccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTATCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGAGCGCCGAAGGCGCTCTGCATATCGCGCCGCTGCTGGGCCTGGGtct                                                                   >  2:6429138/1‑151 (MQ=255)
                                                                                gccgcTCTTTCCCCGGCGGTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTAGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtct                                                                   <  2:3013725/151‑1 (MQ=255)
                                                                                  cgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCAAATCGCTCCGCTGCGCGTCCGGGGTCTCg                                                                 >  2:2104643/1‑151 (MQ=255)
                                                                                    ctctTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTg                                                               <  2:5970659/151‑1 (MQ=255)
                                                                                     tctTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGCGATAGCCGCAGGGGCGCAGCCAATCGCACCCCAGCTCGGCCGGGGGGTCGTgc                                                              >  1:6511860/1‑151 (MQ=255)
                                                                                      ctTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTgcg                                                             <  2:5711616/151‑1 (MQ=255)
                                                                                            ccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATg                                                       <  1:6309276/151‑1 (MQ=255)
                                                                                              ggCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGcc                                                     <  1:9163827/151‑1 (MQ=255)
                                                                                               gCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGCAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCGGGGTCTCGTGCGCACATGCCa                                                    >  1:10422997/1‑151 (MQ=255)
                                                                                               gCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCa                                                    <  2:894444/151‑1 (MQ=255)
                                                                                                cGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCAt                                                   <  2:3309907/151‑1 (MQ=255)
                                                                                                 gTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCAtt                                                  <  1:3002664/151‑1 (MQ=255)
                                                                                                  tttCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTc                                                 <  1:10963506/151‑1 (MQ=255)
                                                                                                  tgtCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTc                                                 <  1:6936130/149‑1 (MQ=255)
                                                                                                   ttCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTcc                                                <  2:2622447/151‑1 (MQ=255)
                                                                                                    tCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTccc                                               <  2:3642131/151‑1 (MQ=255)
                                                                                                     cccgccccgcCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTGGTTGCAGATCGCCGAAGGCGCTCTGCCTATCGCGCCGCTGCGCGTCCTGGGGCTCGTGCGCACCTGCCCTTCCCg                                              >  2:7620298/1‑151 (MQ=255)
                                                                                                     cccgccccgcCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCg                                              <  2:8129153/151‑1 (MQ=255)
                                                                                                        gccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCAc                                           <  1:4312950/151‑1 (MQ=255)
                                                                                                          cccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCGCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCAcgc                                         <  2:5318191/151‑1 (MQ=255)
                                                                                                          cccgccTCGGGAAGCGCCGTCGGCCGCGTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCACTGCATATCGCTCCGCGGCTCGTCCTGGGACGCGTGCGCACATGCCATTCCCGCAcgc                                         <  2:1500523/151‑1 (MQ=255)
                                                                                                            cgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCCAAGGCGCTCTGCAAATCGCTCCGCTGCTCGTGCGGGGGCTCGTGCGCACATGCCATTCCCGCACGCgg                                       >  1:1360812/1‑151 (MQ=255)
                                                                                                              ccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGaa                                     <  1:5862232/151‑1 (MQ=255)
                                                                                                                 cGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATGGCCGAAGGCGCTCTGCATAACGCACCGCTGCACGTCCTGGGTCTCGTGCGCACATTCCCATACCCCACGCCGAATAc                                  >  2:1012913/1‑151 (MQ=255)
                                                                                                                  gggAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATAcc                                 <  2:4025226/151‑1 (MQ=255)
                                                                                                                    gAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGGTCAGCATAAAGCTCCGCGGCGCGTCCGGGGTCGCGTGGGCACCAGCCAATACCCCACCCCGAAAACCGa                               >  1:10575188/1‑151 (MQ=255)
                                                                                                                     aaGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTGGGCCTGGGTCTCGTGCGCACCTGCCATTCCCGCACGCGGTAAACCGat                              >  1:2686959/1‑151 (MQ=255)
                                                                                                                       gcgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGatat                            <  1:4103533/151‑1 (MQ=255)
                                                                                                                        cgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATAtt                           <  2:2325226/151‑1 (MQ=255)
                                                                                                                        cgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATAtt                           <  2:5627589/151‑1 (MQ=255)
                                                                                                                        cgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGAACGCCGAAGGCGCTCTGCATATAGCTCCGCAGCTCGTCCTGGGTCTCGTGCGCACAATCCAATACCGCACGCGGAATACCGaaaat                           >  1:1675332/1‑147 (MQ=255)
                                                                                                                         gcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTg                          <  1:9758606/151‑1 (MQ=255)
                                                                                                                          ccGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGc                         <  2:2737528/151‑1 (MQ=255)
                                                                                                                           cGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCATATCGCCGAAGGCGCTCTGCATATAGCTCCGCAGCTCGTGCGGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATAACGCTATTggg                        >  2:2949101/1‑149 (MQ=255)
                                                                                                                           cGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCg                        <  2:1949001/151‑1 (MQ=255)
                                                                                                                           cGTCGGCCGCTGTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCg                        <  2:1402950/151‑1 (MQ=255)
                                                                                                                            gTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGt                       <  2:8371223/151‑1 (MQ=255)
                                                                                                                               ggCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATg                    <  2:6138178/151‑1 (MQ=255)
                                                                                                                               ggCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATg                    <  2:4150311/151‑1 (MQ=255)
                                                                                                                               ggCCGCGTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATg                    <  2:8629747/151‑1 (MQ=255)
                                                                                                                                    cTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAATGCGCGCTGCATATCGCTCCGCTGCTCGGCCTGGGTCTCGTGCGCACATGCCATTGCCGCACGCGGAATACCGATATTGCGTATGGGCGa               >  2:7007064/1‑151 (MQ=255)
                                                                                                                                     tttCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGaa              <  1:450/151‑1 (MQ=255)
                                                                                                                                        cgcgCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGCAGGCGCGCAGCATATCGCTCCGCAGCTCGTCCGGGGTCTCGTGCGCACATGCCAATCCCGCACGCGGAAAAACCATAGTGCGTATGGGCGAAGGc           >  1:9044328/1‑151 (MQ=255)
                                                                                                                                         gcgcCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCt          <  2:4363593/151‑1 (MQ=255)
                                                                                                                                             cAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCt      <  1:8060024/151‑1 (MQ=255)
                                                                                                                                             cAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCGGCTCGTGCTGGGGAGCGTGCGCACATGCCCATCCCGCACGCGGAATACCGCTATTGCGTATGGGCGAAGGCTTTCt      >  2:10182121/1‑151 (MQ=255)
                                                                                                                                                cccTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACAGGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAg   <  1:8310983/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ATCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG  >  NC_008463/966069‑966364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑