| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,315,218 | Δ1 bp | coding (325/330 nt) | PA14_RS31685 → | FimD/PapC N‑terminal domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,315,216 | 0 | C | . | 99.8% | 2928.5 / ‑3.7 | 592 | coding (323/330 nt) | PA14_RS31685 | FimD/PapC N‑terminal domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (307/284); total (308/284) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 635 total aligned reads displayed.
ACCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAC > NC_008463/5315066‑5315362 | aCCAGGTGGACCCCGGAACCTACCAGGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgc < 2:6892738/151‑1 (MQ=255) ccAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcc > 2:10582837/1‑151 (MQ=255) ggTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcctct < 2:3794119/151‑4 (MQ=255) ggAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCg > 2:1874102/1‑151 (MQ=255) aaCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTg < 1:6702605/151‑1 (MQ=255) cTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCaa > 1:1182995/1‑151 (MQ=255) tACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAg > 2:1126974/1‑151 (MQ=255) tACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAg > 1:323862/1‑151 (MQ=255) aCCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgc > 1:4690866/1‑151 (MQ=255) aCCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgc > 1:7964872/1‑151 (MQ=255) tGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCt < 2:3339261/151‑1 (MQ=255) cGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCGTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGga < 2:2645036/151‑1 (MQ=255) gATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgag < 1:2137633/151‑1 (MQ=255) aTGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgaga > 1:4853953/1‑151 (MQ=255) aTGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgaga > 1:9287570/1‑151 (MQ=255) tGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAt > 1:2721553/1‑151 (MQ=255) gTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAtt > 1:6090798/1‑151 (MQ=255) gTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAtt < 2:10020276/151‑1 (MQ=255) tCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTg > 1:8116427/1‑151 (MQ=255) cTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGc > 2:8351127/1‑151 (MQ=255) tATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc < 2:3704904/151‑1 (MQ=255) tATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc > 1:5435636/1‑151 (MQ=255) tATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc > 1:7838561/1‑151 (MQ=255) tATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc > 2:9700139/1‑151 (MQ=255) tctcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTg > 2:3577213/1‑151 (MQ=255) actcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTg < 1:10040327/150‑1 (MQ=255) ctcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgg < 2:1436719/151‑1 (MQ=255) tcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTggg > 2:6387552/1‑151 (MQ=255) tcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTggg < 1:1529021/151‑1 (MQ=255) cAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgggg < 1:4376371/151‑1 (MQ=255) aCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCt > 1:5565580/1‑151 (MQ=255) aCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCt < 2:3235074/151‑1 (MQ=255) aCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCt < 1:7609727/151‑1 (MQ=255) gCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGga > 2:2006818/1‑151 (MQ=255) cTACCCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa < 2:4779293/151‑1 (MQ=255) cGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGc > 2:8122356/1‑151 (MQ=255) cGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGc > 1:10232695/1‑151 (MQ=255) gCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGcc > 1:9002531/1‑151 (MQ=255) ccAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCt < 1:6410175/151‑1 (MQ=255) cAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTg < 2:7667022/151‑1 (MQ=255) aGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc > 2:6529674/1‑151 (MQ=255) cGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCACGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAg > 2:4099231/1‑151 (MQ=255) gCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAgg < 1:3148397/151‑1 (MQ=255) cAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCg > 2:10646917/1‑151 (MQ=255) aGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGa < 1:4799038/151‑1 (MQ=255) ggATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGAc < 1:2950233/151‑1 (MQ=255) gATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGAcc > 1:3422608/1‑151 (MQ=255) gATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGAcc < 1:1068736/151‑1 (MQ=255) cGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTc < 1:3913595/151‑1 (MQ=255) cGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTc < 2:619062/151‑1 (MQ=255) gTTCCGCCCCCGGGCCGGCGGCGTCAATCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAt > 2:5491024/1‑151 (MQ=255) ccGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtctc > 1:2537016/1‑151 (MQ=255) cGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCg > 1:9632293/1‑151 (MQ=255) gCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGa > 2:4411711/1‑151 (MQ=255) cccccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGac < 2:779117/151‑1 (MQ=255) ccccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGaca < 2:9033949/151‑1 (MQ=255) ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACAcc < 1:1729959/151‑1 (MQ=255) ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACAcc < 2:429692/151‑1 (MQ=255) ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAGTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACAcc < 2:2262688/151‑1 (MQ=255) gggCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGc < 1:4165271/151‑1 (MQ=255) ccGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCt < 2:9338906/151‑1 (MQ=255) cggcggCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCtt < 2:7371746/151‑1 (MQ=255) gcggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCt < 1:720516/151‑1 (MQ=255) gcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcg < 1:6485405/151‑1 (MQ=255) gTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGcc > 1:9443152/1‑151 (MQ=255) gTCAAACCATGCTTAGGCTAAAGCTTCTTGCGCCGTACTCTTGGAGACCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCATGGCGATTGCCTGGGGCTGGACGAACGCCTGCCAGGCTCGACCTTCAATATCGACACCGCCCTTCTGCGcc > 2:9540274/1‑151 (MQ=255) cAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTc < 2:5859239/151‑1 (MQ=255) cAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTc > 2:5701799/1‑151 (MQ=255) aaaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg > 1:6012425/1‑151 (MQ=255) aaaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg > 1:7162543/1‑151 (MQ=255) aCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAt > 1:4536125/1‑151 (MQ=255) tGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctct < 1:103485/151‑1 (MQ=255) tGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACATTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctct > 1:3606056/1‑151 (MQ=255) gCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctctc < 2:5244300/151‑1 (MQ=255) gCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctctc > 1:2314865/1‑151 (MQ=255) cTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCg < 2:2844568/151‑1 (MQ=255) cTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGACCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCg > 2:1337228/1‑151 (MQ=255) ttCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCgg < 2:7561102/151‑1 (MQ=255) ttCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCgg > 1:10492072/1‑151 (MQ=255) tCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGt > 2:1018244/1‑151 (MQ=255) cGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTg > 1:737144/1‑151 (MQ=255) cGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGccc > 2:8809806/1‑151 (MQ=255) gAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGcccc < 2:6467394/151‑1 (MQ=255) gCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGc < 2:1641851/151‑1 (MQ=255) cttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGcc < 2:8494742/151‑1 (MQ=255) ttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATGGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGccc < 1:507113/151‑1 (MQ=255) ttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCctgc > 1:8483378/1‑151 (MQ=255) cGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata < 1:5282060/151‑1 (MQ=255) ggACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGatat > 1:8737701/1‑151 (MQ=255) gccGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAGTGCCTGGGGCTGGACGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCGTCCGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATc < 2:4927476/149‑1 (MQ=255) gACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATc < 1:6873829/151‑1 (MQ=255) gCTGGGCGTCCGCCCCG‑CCTCGGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAg > 2:2169077/1‑151 (MQ=255) tGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc > 1:5767266/1‑151 (MQ=255) tGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc > 1:9873300/1‑151 (MQ=255) gggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCa > 1:8216996/1‑151 (MQ=255) cgccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCt < 2:7162543/151‑1 (MQ=255) cgccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCt < 1:3729471/151‑1 (MQ=255) cgccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCt < 1:6822720/151‑1 (MQ=255) cgccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCt > 1:3526624/1‑151 (MQ=255) cgccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCt < 2:3998169/151‑1 (MQ=255) | ACCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAC > NC_008463/5315066‑5315362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |