| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 888,497 | A→C | intergenic (+143/‑62) | PA14_RS04165 → / → PA14_RS04170 | sigma‑54‑dependent Fis family transcriptional regulator/LysE family translocator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 888,497 | 0 | A | C | 100.0% | 1852.5 / NA | 458 | intergenic (+143/‑62) | PA14_RS04165/PA14_RS04170 | sigma‑54‑dependent Fis family transcriptional regulator/LysE family translocator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (216/242); total (216/242) | |||||||||||
Only 100 of 467 total aligned reads displayed.
GACTGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAAGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCATCGTCGC > NC_008463/888349‑888644 | tGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAcggagg > 1:9327066/1‑151 (MQ=255) tGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAcggagg < 1:7856952/151‑1 (MQ=255) tGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAAcc < 1:1421807/151‑1 (MQ=255) gcgcCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAAccc < 1:4268929/151‑1 (MQ=255) cggcggccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgc > 1:3381455/1‑151 (MQ=255) gcggccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgccc > 1:2074737/1‑151 (MQ=255) gccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgcc < 2:4732992/151‑1 (MQ=255) ccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgccc > 2:3545676/1‑151 (MQ=255) ccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgccc > 2:9299571/1‑151 (MQ=255) cggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgcccc < 1:4527900/151‑1 (MQ=255) cggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgcccc > 2:7545441/1‑151 (MQ=255) ggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgccccg < 1:8156494/151‑1 (MQ=255) gcgcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgccccgc > 2:1434669/1‑151 (MQ=255) gcgcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgccccgc > 1:8541661/1‑151 (MQ=255) gcgcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgccccgc < 2:7616066/151‑1 (MQ=255) gcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAc > 1:4649403/1‑151 (MQ=255) gcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAc > 1:7644299/1‑151 (MQ=255) agtagtCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAcca < 1:4365231/151‑1 (MQ=255) aGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAcca < 2:8505147/151‑1 (MQ=255) aGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGGTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAcca < 2:9685836/151‑1 (MQ=255) cgtcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcc < 2:8988438/151‑1 (MQ=255) gtcAAGCGCGGAAAATCAAACCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcca < 2:3085022/151‑1 (MQ=255) tcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagccag > 2:4164500/1‑151 (MQ=255) aGCTCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCATCGGCGCAAACCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGccc < 1:10008532/151‑1 (MQ=255) aGCGCGGAACATCAAACCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGGGGGCTTTCCCTGTCGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGccc < 2:10528900/151‑1 (MQ=255) aGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGccc > 1:2291863/1‑151 (MQ=255) aGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGccc < 1:5357456/151‑1 (MQ=255) cgGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGTAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCaa > 1:7063923/1‑151 (MQ=255) cgGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCaa < 1:2376943/151‑1 (MQ=255) ggAAAATCTAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAc < 1:1548809/151‑1 (MQ=255) aaacCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAg < 1:6292042/151‑1 (MQ=255) aaaaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAg < 2:1218834/151‑1 (MQ=255) aaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCCGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAggg > 2:1938424/1‑151 (MQ=255) aaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAggg < 2:1715490/151‑1 (MQ=255) aCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGa < 1:2781117/151‑1 (MQ=255) cAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGt > 2:641846/1‑151 (MQ=255) aGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGtt > 2:1116398/1‑151 (MQ=255) ccGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCAACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGATCg > 1:3601008/1‑151 (MQ=255) gTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGAc < 1:9656651/151‑1 (MQ=255) gTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGAc < 1:5821191/151‑1 (MQ=255) aGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCa > 2:982948/1‑151 (MQ=255) tGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCg > 1:6709616/1‑151 (MQ=255) tGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCg > 1:571755/1‑151 (MQ=255) gCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGc < 2:4451776/151‑1 (MQ=255) ccGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAg > 2:1242866/1‑151 (MQ=255) ttAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGccc < 1:8402170/151‑1 (MQ=255) aaTGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctg > 2:7892211/1‑151 (MQ=255) tGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctgct < 2:8257861/151‑1 (MQ=255) cGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTgctgct > 1:6026488/1‑151 (MQ=255) ggTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTc < 1:2996184/151‑1 (MQ=255) ggTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTc < 1:3866074/151‑1 (MQ=255) gggCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGcc < 2:3344960/151‑1 (MQ=255) gggCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGcc > 1:1657866/1‑151 (MQ=255) gCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCAt > 2:6396721/1‑151 (MQ=255) tttCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATgg > 1:926356/1‑151 (MQ=255) tCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGgc > 1:6523095/1‑151 (MQ=255) ccTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGgcgc > 1:10234318/1‑151 (MQ=255) cTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGcgcg < 2:6684903/151‑1 (MQ=255) cTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGcgcg < 1:6979111/151‑1 (MQ=255) tGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGt < 1:511925/151‑1 (MQ=255) ggaGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGtt < 2:5893143/149‑1 (MQ=255) gTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGtt < 2:6037559/151‑1 (MQ=255) gCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTtctc < 2:5714648/151‑1 (MQ=255) cGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTcc > 2:2546617/1‑151 (MQ=255) tCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTg < 1:2685573/151‑1 (MQ=255) ccGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGa > 2:949171/1‑151 (MQ=255) cGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAg > 1:1148168/1‑151 (MQ=255) gggCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGc > 2:5225579/1‑151 (MQ=255) gCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCt > 2:1834126/1‑151 (MQ=255) gCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCt < 1:2318604/151‑1 (MQ=255) cAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTg < 1:3149761/151‑1 (MQ=255) cAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTg < 1:8759808/151‑1 (MQ=255) aGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGt > 2:5091312/1‑151 (MQ=255) aGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGt < 2:5365173/151‑1 (MQ=255) gcggcgCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTc < 2:4594218/151‑1 (MQ=255) gcggcgCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTc < 1:7332029/151‑1 (MQ=255) cggcgCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTca < 1:5225280/151‑2 (MQ=255) gctactcGTTCGGTCGCCCCCCGCCAGGTGCCAACGGAGGTCTCCCTTGCCCTCCCCGCACCAGCCAGCCCGCATCCCGACCAGGCAGTTCGAGCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGAttt < 2:6996799/145‑1 (MQ=255) aCCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTccc < 2:8138336/151‑1 (MQ=255) gTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccgg < 1:3288353/151‑1 (MQ=255) gtCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggt < 2:2423759/150‑1 (MQ=255) cGGTCGCGCCCCGCCAGGAGCCTACGGAGGAATCCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGATCCTGTCGATTTCCCccggtcc < 2:2143725/151‑1 (MQ=255) ggTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccg < 1:1840233/151‑1 (MQ=255) gTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg > 2:5474652/1‑151 (MQ=255) gTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg < 2:2880268/151‑1 (MQ=255) gTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg < 1:9538910/151‑1 (MQ=255) cgcgCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTg < 2:7392980/151‑1 (MQ=255) cgcgCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTg < 2:8684148/151‑1 (MQ=255) cgcgCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTg > 2:3879041/1‑151 (MQ=255) gCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc > 2:4887146/1‑151 (MQ=255) gCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc > 2:6191870/1‑151 (MQ=255) gCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc > 1:2135520/1‑151 (MQ=255) gCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc > 2:10244700/1‑151 (MQ=255) gCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc < 1:1039859/151‑1 (MQ=255) gCCACGAGCCTCCGGACGAAACGCTTGCCCGCCCCGCTCCAGCCAGCCCGCATCCCGACCAGGGAGTTCGACCCATGCCGGTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc < 2:9117757/151‑1 (MQ=255) cAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAACCCACCCGCCAGTTCGACACATGCCGCTAGACCTGCTGCTCGCCATCGGCGCGTACTCCCTGAGCCAGTCGATTGCCCCCGCACCGGAGAACCTGAcct > 1:9018315/1‑150 (MQ=255) aGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAt < 1:1312759/151‑1 (MQ=255) aGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgt > 2:3978099/1‑151 (MQ=255) gCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgtc < 1:9708938/151‑1 (MQ=255) gCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCACTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgtc < 1:408180/151‑1 (MQ=255) | GACTGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAAGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCATCGTCGC > NC_008463/888349‑888644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |