BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	2,362,330	A→C	pseudogene (139/252 nt)	oprI ←	outer membrane lipoprotei OprI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	2,362,330	0	A	C	100.0%	1407.0 / NA	351	pseudogene (139/252 nt)	oprI	outer membrane lipoprotei OprI
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (173/178); total (173/178)

Only 100 of 351 total aligned reads displayed.

CCGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCC  >  NC_008463/2362182‑2362477

ccGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGt                                                                                                                                                   <  1:619444/151‑1 (MQ=255)

ccGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCCCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGt                                                                                                                                                   >  1:4269106/1‑151 (MQ=255)

 cGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTc                                                                                                                                                  >  2:6455143/1‑151 (MQ=255)

  gAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCa                                                                                                                                                 >  2:6562685/1‑151 (MQ=255)

   aGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAg                                                                                                                                                >  1:4820723/1‑151 (MQ=255)

   aGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAg                                                                                                                                                <  2:6822772/151‑1 (MQ=255)

   aGGGACCGGTTTTCAACAGGTCGTGAGACCTAGTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAg                                                                                                                                                <  2:10268339/151‑1 (MQ=255)

            ttttCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCt                                                                                                                                       <  2:3892177/151‑1 (MQ=255)

            ttttCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCt                                                                                                                                       <  2:4482846/151‑1 (MQ=255)

                   cAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACg                                                                                                                                >  2:10481831/1‑151 (MQ=255)

                    aGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGa                                                                                                                               >  1:6057402/1‑151 (MQ=255)

                       tCGTGAGACCTATTACTTGCGGCGGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGagca                                                                                                                            <  2:7048304/151‑1 (MQ=255)

                        cGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGagcag                                                                                                                           <  2:4151252/151‑1 (MQ=255)

                          tGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCt                                                                                                                         >  2:1926284/1‑151 (MQ=255)

                          tGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCt                                                                                                                         <  2:716853/151‑1 (MQ=255)

                           gagaCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTg                                                                                                                        <  1:5087290/151‑1 (MQ=255)

                           gagaCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTg                                                                                                                        <  1:7059842/151‑1 (MQ=255)

                            agaCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCCTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGc                                                                                                                       <  2:1516225/151‑1 (MQ=255)

                              aCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCgt                                                                                                                     >  2:1062248/1‑151 (MQ=255)

                                cTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCTCGAGCAGCTGCgtct                                                                                                                   >  2:7297974/1‑149 (MQ=255)

                                cTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCgtct                                                                                                                   >  2:7298735/1‑149 (MQ=255)

                                 tATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCtt                                                                                                                  >  2:8967472/1‑151 (MQ=255)

                                 tATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCtt                                                                                                                  >  1:654006/1‑151 (MQ=255)

                                  aTTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTc                                                                                                                 >  1:10350816/1‑151 (MQ=255)

                                    ttcTTCCGTCTGTCTTTTTCCAGCATGAGCTGGTCTCGCTCGTTATACTCGTCAGAGTTCTGCTGATCTTTCTGTGCTGCGCCCAGAGCTTCGTCAGCCTTGCGTTTGGCTTCGTCCGCGCGAGCCTTAGCACGAGCAGCTGCGTCTTCgg                                                                                                               <  1:1472498/149‑1 (MQ=255)

                                    tACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCgg                                                                                                               >  2:3396399/1‑151 (MQ=255)

                                      cTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTa                                                                                                             <  1:3614936/151‑1 (MQ=255)

                                        tGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGc                                                                                                           >  2:4269204/1‑151 (MQ=255)

                                         gCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCg                                                                                                          <  2:5031296/151‑1 (MQ=255)

                                          cGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCgg                                                                                                         <  1:6932338/151‑1 (MQ=255)

                                          cGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCgg                                                                                                         <  1:10220408/151‑1 (MQ=255)

                                           ggctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGt                                                                                                        >  2:8732317/1‑151 (MQ=255)

                                            gctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTc                                                                                                       <  2:9610492/151‑1 (MQ=255)

                                              tggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAg                                                                                                     >  2:6114409/1‑151 (MQ=255)

                                                 ctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACg                                                                                                  >  1:4003700/1‑151 (MQ=255)

                                                      tCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCtt                                                                                             >  1:9167822/1‑151 (MQ=255)

                                                      tCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCtt                                                                                             <  2:7870355/151‑1 (MQ=255)

                                                       ccAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTc                                                                                            <  2:5737940/151‑1 (MQ=255)

                                                       ccAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTc                                                                                            >  2:3607303/1‑151 (MQ=255)

                                                         aGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCgg                                                                                          <  1:2751516/151‑1 (MQ=255)

                                                           cATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGtt                                                                                        >  1:3384740/1‑151 (MQ=255)

                                                           cATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGtt                                                                                        <  2:5920893/151‑1 (MQ=255)

                                                            aTGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGttt                                                                                       >  1:1649191/1‑151 (MQ=255)

                                                               cgcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGAAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCtt                                                                                    >  2:2477357/1‑151 (MQ=255)

                                                                gcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCttt                                                                                   >  1:3466024/1‑151 (MQ=255)

                                                                gcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCttt                                                                                   >  1:6769364/1‑151 (MQ=255)

                                                                 cAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTg                                                                                  >  2:2222036/1‑151 (MQ=255)

                                                                  aGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg                                                                                 >  1:9749968/1‑151 (MQ=255)

                                                                  aGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg                                                                                 >  1:721091/1‑151 (MQ=255)

                                                                  aGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCGTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGGTTCTTTgg                                                                                 >  1:4535595/1‑151 (MQ=255)

                                                                      cACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTg                                                                             <  2:2589923/151‑1 (MQ=255)

                                                                      cACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTg                                                                             <  1:8171914/151‑1 (MQ=255)

                                                                      cACGCTCGTTAGCCCCGTCAGCGGTCTGCTGAGCGTTCGGAGCCGCGCCCAGAGCGCCGGCAGCCTCGCGATCGGCTTCGACAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTGCGGTTTCTTTGGCGTg                                                                             <  2:7765374/151‑1 (MQ=255)

                                                                       aCGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTgg                                                                            <  1:3041088/151‑1 (MQ=255)

                                                                           tCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGgctgc                                                                        >  2:4023842/1‑151 (MQ=255)

                                                                             gTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGctgctg                                                                      >  2:9793342/1‑151 (MQ=255)

                                                                             gTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGctgctg                                                                      <  1:3214738/151‑1 (MQ=255)

                                                                             gTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGctgctg                                                                      <  1:9332898/151‑1 (MQ=255)

                                                                                aGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCaa                                                                   <  2:1734944/151‑1 (MQ=255)

                                                                                    tCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCgg                                                               >  1:10481339/1‑151 (MQ=255)

                                                                                       tCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTgg                                                            <  2:8653437/151‑1 (MQ=255)

                                                                                       tCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTgg                                                            >  2:8009240/1‑151 (MQ=255)

                                                                                         aGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGcc                                                          >  2:883295/1‑151 (MQ=255)

                                                                                          gCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCa                                                         >  1:157174/1‑151 (MQ=255)

                                                                                             gTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGaa                                                      >  1:3290471/1‑151 (MQ=255)

                                                                                                tgctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcag                                                   <  1:5233116/151‑1 (MQ=255)

                                                                                                     aGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagcc                                              >  1:4284179/1‑151 (MQ=255)

                                                                                                       cTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccag                                            <  2:4480089/151‑1 (MQ=255)

                                                                                                        tttCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccaga                                           <  2:8583105/151‑1 (MQ=255)

                                                                                                        tttCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccaga                                           <  1:8713447/151‑1 (MQ=255)

                                                                                                        tttCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTGTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccaga                                           >  2:1868312/1‑151 (MQ=255)

                                                                                                           cTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagcc                                        <  2:6063358/151‑1 (MQ=255)

                                                                                                              agcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAgccagagcccga                                     >  2:5479045/1‑151 (MQ=255)

                                                                                                                cagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGCGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCcagagccagagc                                   <  2:3634676/151‑1 (MQ=255)

                                                                                                                 agcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagca                                  >  2:5313370/1‑151 (MQ=255)

                                                                                                                    gcCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcagag                               <  1:9092790/151‑1 (MQ=255)

                                                                                                                    gcCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcagag                               <  1:1195077/151‑1 (MQ=255)

                                                                                                                        agagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAtt                           <  1:757135/151‑1 (MQ=255)

                                                                                                                          agCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTGGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTc                         <  2:7553924/151‑1 (MQ=255)

                                                                                                                            cTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAg                       >  2:4738210/1‑151 (MQ=255)

                                                                                                                            cTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAg                       >  1:10068963/1‑151 (MQ=255)

                                                                                                                                  cAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgtt                 <  2:6664654/151‑1 (MQ=255)

                                                                                                                                  cAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgtt                 >  2:9220216/1‑151 (MQ=255)

                                                                                                                                     ccTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttgtt              <  1:10666114/151‑1 (MQ=255)

                                                                                                                                      cTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCACCCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTc             >  1:2256394/1‑151 (MQ=255)

                                                                                                                                      cTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTc             <  2:2860954/151‑1 (MQ=255)

                                                                                                                                      cTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTc             >  1:2475726/1‑151 (MQ=255)

                                                                                                                                       ttGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCa            <  2:7459971/151‑1 (MQ=255)

                                                                                                                                        tGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCATCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCTACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCAt           <  1:2647279/151‑1 (MQ=255)

                                                                                                                                          cGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGGTGTTCATCg         <  2:3153517/151‑1 (MQ=255)

                                                                                                                                           gATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgt        <  1:7892019/151‑1 (MQ=255)

                                                                                                                                           gATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgt        <  1:1381837/151‑1 (MQ=255)

                                                                                                                                           gATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgt        >  2:10017046/1‑151 (MQ=255)

                                                                                                                                           gATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgt        <  1:3802296/151‑1 (MQ=255)

                                                                                                                                            aTAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgtg       <  2:752087/151‑1 (MQ=255)

                                                                                                                                            aTAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgtg       >  1:5680214/1‑151 (MQ=255)

                                                                                                                                            aTAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgtg       >  1:5959519/1‑151 (MQ=255)

                                                                                                                                              aGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGtt     >  2:199097/1‑151 (MQ=255)

                                                                                                                                               ggCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTGGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTc    <  2:8307577/151‑1 (MQ=255)

                                                                                                                                                 cTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTccc  >  1:8894172/1‑151 (MQ=255)

CCGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCC  >  NC_008463/2362182‑2362477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`