| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,028,119 | Δ1 bp | intergenic (‑41/+96) | PA14_RS22975 ← / ← PA14_RS22980 | Nramp family divalent metal transporter/ribbon‑helix‑helix domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,028,117 | 0 | C | . | 99.6% | 2441.1 / 2.7 | 497 | intergenic (‑39/+98) | PA14_RS22975/PA14_RS22980 | Nramp family divalent metal transporter/ribbon‑helix‑helix domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (236/258); minor base G (0/2); total (237/260) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 524 total aligned reads displayed.
GATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGCCCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCGGGTGGGTTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTCG > NC_008463/5027968‑5028263 | gATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGc < 1:7710934/150‑1 (MQ=255) tGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccg > 2:8186221/1‑149 (MQ=255) tGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccg > 2:5681321/1‑149 (MQ=255) ggCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccgt < 2:329098/150‑3 (MQ=255) ggTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCgtggt < 2:5509024/150‑1 (MQ=255) gTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGACCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCgtggtg < 1:2840663/150‑1 (MQ=255) gTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCgtggtg < 1:9955971/150‑1 (MQ=255) gCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGc > 1:4511067/1‑150 (MQ=255) gCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGc < 1:3619172/150‑1 (MQ=255) cccAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCa < 1:7992562/150‑1 (MQ=255) ccAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAg < 1:10068279/150‑1 (MQ=255) ccGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAt > 2:5121849/1‑150 (MQ=255) ccGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAt > 2:8692369/1‑150 (MQ=255) cGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAtt > 2:9745241/1‑150 (MQ=255) cGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAtt > 1:8779901/1‑150 (MQ=255) cGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAtt > 2:2659550/1‑150 (MQ=255) gggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTc < 1:1912534/150‑1 (MQ=255) gggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTc > 1:5777211/1‑150 (MQ=255) ggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCa < 2:6004203/150‑1 (MQ=255) ggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCa > 2:9508720/1‑150 (MQ=255) tCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACg > 1:9671697/1‑150 (MQ=255) ccATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGa > 1:927249/1‑150 (MQ=255) aTGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAgg < 2:3167079/150‑1 (MQ=255) aTGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAgg < 1:7434564/150‑1 (MQ=255) aTGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAgg > 1:67651/1‑150 (MQ=255) aTGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAgg < 1:1446575/150‑1 (MQ=255) aTGGAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGAAGGGAGTATTTCACGAgg < 2:4188942/150‑1 (MQ=255) tAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGa > 2:8342118/1‑150 (MQ=255) gCCGACCGAGACCAGCAGGCCGGGGCCGACGACCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACg > 2:661328/1‑150 (MQ=255) gCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACg < 2:7797461/150‑1 (MQ=255) gaccgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCg < 2:5856496/150‑1 (MQ=255) gaCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCgg > 1:10310808/1‑150 (MQ=255) cagcagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGACCGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGgga < 2:4624797/150‑1 (MQ=255) gcagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGggagg < 1:3902285/150‑1 (MQ=255) cagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGggagga < 1:7011584/150‑1 (MQ=255) cagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGggagga < 2:1602805/150‑1 (MQ=255) ggCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAg < 2:10995254/150‑1 (MQ=255) gCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGt < 2:8592104/150‑1 (MQ=255) gCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGt > 2:1035886/1‑150 (MQ=255) cGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGc < 2:1949197/150‑1 (MQ=255) cGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGc < 1:726702/150‑1 (MQ=255) ggggCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCg < 1:10756532/150‑1 (MQ=255) gacgaACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGc < 1:9096560/150‑1 (MQ=255) gacgaACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGc > 1:638805/1‑150 (MQ=255) acgaACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGcc > 2:1404346/1‑150 (MQ=255) aaCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTaa < 2:3491783/150‑1 (MQ=255) aaCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGGGGGCAGGCAGTATTTCACGAGGCGCCGCCGGAGCGGGGAGGAAGTGCGACCAGCCTaa > 2:4800263/1‑150 (MQ=255) aGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACg > 1:8483386/1‑150 (MQ=255) gcgcCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGt < 2:8882423/150‑1 (MQ=255) gcgcCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGt < 2:7641337/150‑1 (MQ=255) gcCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGttt < 1:4258973/150‑1 (MQ=255) gcCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGttt < 2:7421041/150‑1 (MQ=255) ccAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTc > 1:1531087/1‑150 (MQ=255) aGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCAc > 2:2291015/1‑150 (MQ=255) gcAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtc < 1:7555804/150‑3 (MQ=255) gcAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtc < 2:4533631/150‑3 (MQ=255) aGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgc < 1:4073133/150‑5 (MQ=255) aGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgc < 1:234669/150‑5 (MQ=255) aGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgc > 1:8975501/1‑146 (MQ=255) aGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgc < 1:47586/150‑5 (MQ=255) gcggcgAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgcg > 2:365545/1‑145 (MQ=255) gcggcgAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgcg > 1:5454525/1‑145 (MQ=255) ggcgAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgcgtc < 1:10611184/150‑8 (MQ=255) cGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctc < 2:10121028/150‑1 (MQ=255) cGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctc < 1:5632827/150‑1 (MQ=255) tCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctccc > 2:2445900/1‑150 (MQ=255) tCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctccc > 2:7251667/1‑150 (MQ=255) gccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTccctcccctc > 2:1788601/1‑150 (MQ=255) ccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCa < 1:10933044/150‑1 (MQ=255) ccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCa < 2:6900508/150‑1 (MQ=255) ccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCa > 2:6057104/1‑150 (MQ=255) cggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGACCGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAg < 1:621672/150‑1 (MQ=255) cggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAg > 1:5219707/1‑150 (MQ=255) gcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGc > 1:3339056/1‑150 (MQ=255) cACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGcc < 2:8992121/150‑1 (MQ=255) aCCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCt > 2:2798062/1‑150 (MQ=255) ccGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTg > 1:586278/1‑150 (MQ=255) cGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTgg < 2:7345588/150‑1 (MQ=255) gCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTggg < 2:5020749/150‑1 (MQ=255) gCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTggg > 1:2055270/1‑150 (MQ=255) ccACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGgc > 2:712307/1‑150 (MQ=255) cTGTGGCTGACCGCCGTGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCTGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCt < 1:4297607/150‑1 (MQ=255) cTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCt < 1:5359302/150‑1 (MQ=255) cTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCt < 2:4318865/150‑1 (MQ=255) ccgccgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAg < 1:7765029/150‑1 (MQ=255) gccgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGc > 2:6854047/1‑150 (MQ=255) gccgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGc > 1:8216769/1‑150 (MQ=255) gAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCa > 1:8310217/1‑150 (MQ=255) aGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAg > 2:6707129/1‑150 (MQ=255) ggACAGAACGGCGCGGAGG‑CCGTGGTGGGCAGGGAGTAGTTCACGCGGCGACGCCGGATCGGGGAGGAAGAGCGACCAGCCTAAACGTTGCACCCCGGG‑CGCCTCTTCCCTCCCCTCCCGCCAGGGCGCGCTGGCCGACCAGGCTCAGCt < 2:10461927/150‑1 (MQ=255) gACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTc < 1:1755454/150‑1 (MQ=255) gACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTc > 2:8447174/1‑150 (MQ=255) gACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTc < 2:5257704/150‑1 (MQ=255) aCAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCg < 2:7926600/150‑1 (MQ=255) aCAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCg < 1:2624582/150‑1 (MQ=255) cAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCgg < 1:605291/150‑1 (MQ=255) gAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCg > 1:8632990/1‑150 (MQ=255) ggCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCt < 2:1241402/150‑1 (MQ=255) gcgcGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCtt > 2:10790436/1‑150 (MQ=255) ggTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTcg < 2:10639687/150‑1 (MQ=255) | GATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGCCCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCGGGTGGGTTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTCG > NC_008463/5027968‑5028263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |