| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,315,218 | Δ1 bp | coding (325/330 nt) | PA14_RS31685 → | FimD/PapC N‑terminal domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,315,216 | 0 | C | . | 99.8% | 2221.1 / ‑2.1 | 450 | coding (323/330 nt) | PA14_RS31685 | FimD/PapC N‑terminal domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (214/235); minor base G (0/1); total (214/236) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
Only 100 of 474 total aligned reads displayed.
CAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTA > NC_008463/5315068‑5315361 | gACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAg < 2:4750992/150‑1 (MQ=255) ccccGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGc < 2:8212279/150‑1 (MQ=255) ccGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCg < 1:7330986/150‑1 (MQ=255) gAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCg > 2:2884952/1‑150 (MQ=255) aaCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGt < 1:10378369/150‑1 (MQ=255) cTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCa > 1:3514384/1‑150 (MQ=255) tACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCaa > 1:2343144/1‑150 (MQ=255) ccATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgc > 1:338633/1‑150 (MQ=255) cATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgcg < 1:10000352/150‑1 (MQ=255) cGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTgg < 1:1347375/150‑1 (MQ=255) gATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGga > 2:10098952/1‑150 (MQ=255) gATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGga > 2:2199401/1‑150 (MQ=255) gTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAt < 1:1498391/150‑1 (MQ=255) aTCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc < 1:9389810/150‑1 (MQ=255) aTCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTACTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc < 1:5147904/150‑1 (MQ=255) tcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgg < 1:6300413/150‑1 (MQ=255) aaCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgggg < 2:5242446/150‑1 (MQ=255) aCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGc < 1:8511714/150‑1 (MQ=255) cGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCt < 2:10763727/150‑1 (MQ=255) cGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGAGCAAGCGCCTGGAGATTGCCTGGGGCt < 1:879617/150‑1 (MQ=255) gCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTgg > 1:9182419/1‑150 (MQ=255) gCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTgg < 1:799893/150‑1 (MQ=255) gCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTgg > 2:8366841/1‑150 (MQ=255) gCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTgg > 1:7014223/1‑150 (MQ=255) cAGCCACGCCAGTCGCACCCGTATCGAGTTCCTCCCCCGCGCCGGCGGCGTCAAACCCAGCTTCGTCGAACTCTTCTTGCGCCGGACGCTGGGCGTCCGCCCAG‑CCTATGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGga < 1:2784014/150‑1 (MQ=255) aGCTACGCCAGTCGCACCAGGATCGCGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGACCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaa < 2:3333736/150‑1 (MQ=255) tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAGCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa < 1:10224457/150‑1 (MQ=255) tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa > 2:6100911/1‑150 (MQ=255) tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa < 2:9068220/150‑1 (MQ=255) gCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGc < 1:6723576/150‑1 (MQ=255) acAGTCGCACCCTGATCGACTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGATTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGcc < 1:4226519/149‑1 (MQ=255) aGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTg > 2:5862124/1‑150 (MQ=255) gTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc < 2:2562695/150‑1 (MQ=255) gCACCCGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAg < 1:9725715/150‑1 (MQ=255) cACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAgg > 2:6232840/1‑150 (MQ=255) ccAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGCACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGCGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCt < 1:3312428/150‑1 (MQ=255) ggATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGa > 1:3999713/1‑150 (MQ=255) ggATCGAGGTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGa < 2:8995554/150‑1 (MQ=255) gATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGAc > 1:3799171/1‑150 (MQ=255) aTCGAGGTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGAcc < 2:771500/150‑1 (MQ=255) tCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑GCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCGGGAGGCACGCCTGGCAGGCTCGAccg > 2:7070039/1‑149 (MQ=255) tCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt < 2:3688008/150‑1 (MQ=255) gcGAGGTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGGCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt < 1:5656207/149‑1 (MQ=255) cGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCtt > 2:2771257/1‑150 (MQ=255) aGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCa > 1:1787238/1‑150 (MQ=255) tCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtc < 1:10764687/150‑1 (MQ=255) tCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtc > 1:3170255/1‑150 (MQ=255) tCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtc > 2:9226746/1‑150 (MQ=255) tCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtc > 1:47478/1‑150 (MQ=255) ccGCCCCCGGGGCGGCTGCGTCAACCCCTGCTTCGGCGACCGCTTCTTGCGCCGGTCGCTGGGAGTCCGCCCCG‑CCTCTGAGGCCGGCGTTCAATCGCCTGGAGAGTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtct < 1:7753718/150‑1 (MQ=255) ccGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtct < 2:1979928/150‑1 (MQ=255) cccccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGa > 2:3562286/1‑150 (MQ=255) ccccGGGCCGGCGGCGTTAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGac < 1:5504803/150‑1 (MQ=255) cccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGaca > 1:2002708/1‑150 (MQ=255) ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGacac < 2:6933904/150‑1 (MQ=255) gggCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCg < 1:7474653/150‑1 (MQ=255) ggCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGc > 2:3095967/1‑150 (MQ=255) ggCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGc > 1:5197880/1‑150 (MQ=255) ccGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGccc < 1:7641942/150‑1 (MQ=255) ggcggcGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCtt > 2:1796825/1‑150 (MQ=255) ggcggcGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCtt < 1:1928615/150‑1 (MQ=255) gcggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTc > 2:4851571/1‑150 (MQ=255) cgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCGGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcg > 2:6652223/1‑150 (MQ=255) tCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGcc < 2:7969499/150‑1 (MQ=255) cAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCt < 2:9782662/150‑1 (MQ=255) aaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg > 1:10483161/1‑150 (MQ=255) aCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGa > 2:3191021/1‑150 (MQ=255) cccTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAt > 1:4513410/1‑150 (MQ=255) cTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtct > 1:5370464/1‑150 (MQ=255) tGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctc > 2:5563387/1‑150 (MQ=255) gCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctct < 1:7164229/150‑1 (MQ=255) ctgcGGCGACCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGAGCAAGCGCCTGGAGATTGCCTGGGGCGGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctctc < 2:8045528/147‑1 (MQ=255) ttCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCg < 1:2105601/150‑1 (MQ=255) tCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCgg < 1:4569240/150‑1 (MQ=255) ggCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTg > 2:9365117/1‑150 (MQ=255) ggCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTg < 1:1672075/150‑1 (MQ=255) cGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGcc < 1:4080962/150‑1 (MQ=255) gAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGccc < 1:10990328/150‑1 (MQ=255) aCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa > 2:1394194/1‑150 (MQ=255) aCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa > 2:1211881/1‑150 (MQ=255) aCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa < 2:9519868/150‑1 (MQ=255) aCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa < 1:2604158/150‑1 (MQ=255) cttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGc > 1:2902027/1‑150 (MQ=255) tcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGccc < 1:1059829/150‑1 (MQ=255) ttGCGCCGTACGATGTGCGTCAGCCGCG‑GCTCTGAGGCCGGCGTGCAAGCGCCTTGATTTTGCCTGGGGCTGTAAGTACGCGAGCCTGGCTCGACATTCTATCTCGACACCGCACTTCTGCGCCTCGATCTCTCGTTGCCCCAGGCCctg < 2:406619/150‑1 (MQ=255) cgcCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCctgctg > 2:5040203/1‑150 (MQ=255) ccGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGa > 1:9316083/1‑150 (MQ=255) ggACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata < 2:4630708/150‑1 (MQ=255) ggACGCGGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCACGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata < 2:7434614/150‑1 (MQ=255) gACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGatat > 1:9856861/1‑150 (MQ=255) gACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGatat > 1:6439645/1‑150 (MQ=255) gCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCaa < 2:871121/150‑1 (MQ=255) cTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAg > 2:10482362/1‑150 (MQ=255) tGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGc < 2:428653/150‑1 (MQ=255) gggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc < 1:905176/150‑1 (MQ=255) gggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCACTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGca > 2:8478765/1‑149 (MQ=255) ggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTTCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCa < 2:5307453/150‑1 (MQ=255) gCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCACGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCAc < 2:10144669/150‑1 (MQ=255) gCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCAc < 1:4273177/150‑1 (MQ=255) cgccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGc < 2:7536284/150‑1 (MQ=255) | CAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTA > NC_008463/5315068‑5315361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |