| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,809,308 | Δ1 bp | intergenic (‑194/+25) | rpsF ← / ← rlmB | 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,809,306 | 0 | C | . | 96.5% | 1694.1 / 58.1 | 373 | intergenic (‑192/+27) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB |
| Reads supporting (aligned to +/- strand): ref base C (11/2); new base . (186/173); total (198/175) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.31e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 401 total aligned reads displayed.
AAGGAGTGAATGTTTTCTTGGCTTGCCTGGTGGAGAGGCGAACGAACGCCTGCCCGCGCGGCAAGGGGCGACATTCTAGAGAAGGGCAACCGGCGAAGCAAGGAAGATTGGCGAATATTTGTACAGCGGATGGAATGGGCGCGCGGGGCCCCCCCCGGGGGGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTTGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAGTCGCAGTGC > NC_008463/5809158‑5809450 | ggcaaggagtgaatgttttcttggcttgcctggtggagaggcgaacgaacgcctgcccgcgcggcatggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtactgcggatggaatggCGCGGGGcc > 1:2672978‑M2/142‑150 (MQ=255)ggcaaggagtgaatgttttcttggcttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGGcc < 1:7396242‑M2/9‑1 (MQ=255) aaggagtgaatgttttcttggcttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGgggccgcg > 2:10584944‑M2/139‑147 (MQ=255) gagtgaatgttttcttggcttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCgcggggccgcgccg > 1:5474557‑M2/136‑144 (MQ=255) gagtgaatgttgtcttggcttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCgcggggccgcgccg < 2:9530529‑M2/15‑7 (MQ=255) ttGGCTGGCCGGGTGGAGAGGCGACCGAACGCCGGCCCGCGCGGCAAGGGGCGACAATCGAGCCACGCGCACCCGGCGAAGCACGGCAGATTGGCGAATCTTGGTACAGCGGATGGAATG‑‑‑GCGCGGGG‑CCGCGCCGCGGCGGCCCCGCAc < 2:10201303/150‑1 (MQ=255) ttggcttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCAc > 1:10300512‑M2/122‑150 (MQ=255) gcttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCAcgcg > 1:5709509‑M2/119‑150 (MQ=255) cttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACgcgc > 1:1332780‑M2/118‑150 (MQ=255) cttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACgcgc > 2:10932383‑M2/118‑150 (MQ=255) cttgcctgggggagaggcgaacgaccgcctgcccgcgcggcaaggggcgacattctagcgaagggcacccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACgcgc < 1:7609293‑M2/33‑1 (MQ=255) ttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCt < 2:2097333‑M2/34‑1 (MQ=255) ttgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCt > 2:10018705‑M2/117‑150 (MQ=255) tgcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTc > 2:2009536‑M2/116‑150 (MQ=255) gcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCa > 1:7165349‑M2/115‑150 (MQ=255) gcctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCa < 2:4061580‑M2/36‑1 (MQ=255) ctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACt > 1:4498538‑M2/113‑150 (MQ=255) ctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACt > 2:5764132‑M2/113‑150 (MQ=255) ctggtggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACCCGCTCACt > 1:694472‑M2/113‑150 (MQ=255) gtggcgaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCa < 1:8757976‑M2/41‑1 (MQ=255) ggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGc > 2:4452073‑M2/108‑150 (MQ=255) ggagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaagggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGc > 2:2297025‑M2/108‑150 (MQ=255) gagaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCg > 2:7756442‑M2/107‑150 (MQ=255) agaggcgaacgaccgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCgg < 1:7746334‑M2/45‑1 (MQ=255) agaggcgaacgaacgccggcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCgg < 2:3580613‑M2/45‑1 (MQ=255) gaggcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgacgcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCggg < 1:952438‑M2/46‑1 (MQ=255) ggcgaacgaacgcctgcccgcgcggcatggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtccagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGt < 1:6438521‑M2/48‑1 (MQ=255) gcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTg > 1:560565‑M2/102‑150 (MQ=255) gcgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTg < 2:174689‑M2/49‑1 (MQ=255) cgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTgc < 1:10875100‑M2/50‑1 (MQ=255) cgaacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTgc < 2:7323978‑M2/50‑1 (MQ=255) aacgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTgcgc < 1:7837616‑M2/52‑1 (MQ=255) cgaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTg > 2:6125148‑M2/97‑150 (MQ=255) gaacgcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTgg < 2:8869900‑M2/55‑1 (MQ=255) aacgccggcccgcgcggcaaggggcgacattctagagaagggcaaccggcgcagcaaggaagattggcgaataagtgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGc < 2:3309396‑M2/56‑1 (MQ=255) gcctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCgga > 1:4817334‑M2/92‑150 (MQ=255) ctgcccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCggagg > 1:9118590‑M2/90‑150 (MQ=255) cccgcgcggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATc > 2:8407934‑M2/87‑150 (MQ=255) gcgcggcacggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGAtctcg < 1:8935461‑M2/67‑3 (MQ=255) cggcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAAc < 2:3825259‑M2/70‑1 (MQ=255) gcaaggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑g > 1:7477555‑M2/79‑150 (MQ=255) ggggcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAg > 1:10682572‑M2/75‑150 (MQ=255) gcgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTTGCGGAGGATCTCGAACA‑GGCAGACg > 2:9038382‑M2/72‑150 (MQ=255) cgacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaagggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGc < 1:4699281‑M2/80‑1 (MQ=255) gacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGcc < 2:8064723‑M2/81‑1 (MQ=255) gacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGcc > 2:2910650‑M2/70‑150 (MQ=255) gacattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGcc > 1:2211800‑M2/70‑150 (MQ=255) acattctagagacgggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCg < 2:1697529‑M2/82‑1 (MQ=255) acattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCg > 2:4141583‑M2/69‑150 (MQ=255) acattctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCg > 2:9412327‑M2/69‑150 (MQ=255) ctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGc > 2:10689150‑M2/64‑150 (MQ=255) ctagagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGc < 1:4207895‑M2/87‑1 (MQ=255) gagaagggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGAc > 2:7222276‑M2/61‑150 (MQ=255) agggcaaccggcgaagcaaggaagattggctaatatttgtaccgcggagggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCgag < 1:3950961‑M2/94‑1 (MQ=255) agggcaaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGCGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCgag > 2:6432280‑M2/57‑150 (MQ=255) gggcacccggcgaagcaaggaagatgggcgaatatttgtacagcggatggcatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCgaga < 1:233151‑M2/95‑1 (MQ=255) aaccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGGTGGCGGAGGATCTCGATCA‑GGCAGACGCCGGTGGCGACCGAGACGtt > 1:4917721‑M2/52‑150 (MQ=255) aaccggcgaagcaaggaagattggcgaatatttgtacagcggagggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGtt < 1:1111995‑M2/99‑1 (MQ=255) accggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCACACTCCCGCGGGGTGCGCAGGCGGGGGGTCTCGAACA‑GGCCGACGCCGGTGGCGACCGAGACGTTc > 1:5121872‑M2/51‑150 (MQ=255) ccggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCa < 1:8878760‑M2/101‑1 (MQ=255) cggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAg < 2:541655‑M2/102‑1 (MQ=255) ggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGGCCGCGCCC‑CGGCGGCCCCGCACGCGCTAACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGGACA‑GGCAGTCGCCGGTGGCGACCGAGACGTTCAgg > 2:1087398‑M2/48‑150 (MQ=255) ggcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAgg > 1:5300992‑M2/48‑150 (MQ=255) gcgaagcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGgc > 2:482629‑M2/47‑150 (MQ=255) gacgcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGgctg < 1:6256859‑M2/106‑1 (MQ=255) aagcaaggaagattggcgaatatttgtccagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACACCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGgctgc > 2:3679904‑M2/44‑150 (MQ=255) aagcaaggaagattggcgaatatttgtacagcggatggcatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGgctgc > 2:5726381‑M2/44‑150 (MQ=255) agcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGgctgct < 1:9784130‑M2/108‑1 (MQ=255) gcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGCGACGTTCAGGctgctg > 2:268933‑M2/42‑150 (MQ=255) gcaaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGctgctg > 2:2469211‑M2/42‑150 (MQ=255) caaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGa > 1:10084573‑M2/41‑150 (MQ=255) caaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGa > 2:6823432‑M2/41‑150 (MQ=255) caaggaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCGGGCGGAGGATCTCGAACA‑GGCAGCCGCCGGTGGCGACCGAGACGTTCAGGCTGCTGa < 2:1594670‑M2/110‑1 (MQ=255) gaagattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCt < 2:6386136‑M2/114‑1 (MQ=255) agattggcgattttttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGc < 1:8532176‑M2/116‑1 (MQ=255) agattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGc > 1:3311988‑M2/35‑150 (MQ=255) gattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGcc < 2:9251469‑M2/117‑1 (MQ=255) gattggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGcc > 2:10364704‑M2/34‑150 (MQ=255) tggcgaatatttgtacagcggatggaatggCGCGGGGCCGCGCCGCGGCGGGCCCC‑CACGCGCTCACACCAGCCGGGTGCGCTGGCGGCGGATCTCGAACA‑GGCAGAAGCCGGTGGCGACCGAGACGTTCAGGCTTCTGACGCTGCCGGc > 1:9217211‑M2/31‑150 (MQ=255) ggcgaatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGcc < 1:7532510‑M2/121‑1 (MQ=255) gaatattggtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATc < 1:1721659‑M2/124‑1 (MQ=255) aatatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCg > 1:6106889‑M2/26‑150 (MQ=255) aatatttgtaaagcggatggactggCGCGGGG‑CCGCGACGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCCGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGACGGCCATCg > 2:5064792‑M2/26‑150 (MQ=255) atatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGCCGCCCGAGACGTTCAGGCTGCTGTCGCTGCCGGCCCTCgg > 2:8831669‑M2/25‑150 (MQ=255) tatttgtaccgcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGc < 2:2964248‑M2/127‑1 (MQ=255) tatttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGc < 2:8593752‑M2/127‑1 (MQ=255) atttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCa > 2:3435350‑M2/23‑150 (MQ=255) atttgtacagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCa > 1:10829532‑M2/23‑150 (MQ=255) gTACAGCGGATGGAATG‑‑‑GCGCGGGG‑CCGCGCCGCGGCGGCCCCCCACGCGCGCACACCAGCGGGGTGCGCTGGCGGAGGATCACGAACACGGCCAAC‑CCCGTGGCGACCGAGACCTTCAGGCTTCTTAAGCAGCCGGCCCACGGCAAccc > 1:593/1‑149 (MQ=255) acagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTgg < 1:8607031‑M2/134‑1 (MQ=255) cagcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGc < 1:6628072‑M2/135‑1 (MQ=255) agcggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCg < 2:743677‑M2/136‑1 (MQ=255) cggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAg > 2:1268187‑M2/13‑150 (MQ=255) ggatggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAgg < 1:8372823‑M2/139‑1 (MQ=255) tggaatggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAg < 1:9724861‑M2/142‑1 (MQ=255) atggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAGACGc > 2:877033‑M2/5‑150 (MQ=255) tggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGACCA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAGTCGCa < 2:462991‑M2/147‑1 (MQ=255) ggCGCGGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAGTCGCAg < 1:197283‑M2/148‑1 (MQ=255) cgcgGGG‑CCGCGCCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAGTCGCAGTg < 1:4619507/150‑1 (MQ=255) gcgGGGCCGCG‑CCGCGGCGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTCGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAGTCGCAGTGc > 2:7624705/1‑150 (MQ=255) | AAGGAGTGAATGTTTTCTTGGCTTGCCTGGTGGAGAGGCGAACGAACGCCTGCCCGCGCGGCAAGGGGCGACATTCTAGAGAAGGGCAACCGGCGAAGCAAGGAAGATTGGCGAATATTTGTACAGCGGATGGAATGGGCGCGCGGGGCCCCCCCCGGGGGGGCCCCGCACGCGCTCACTCCAGCGGGGTGCGCTGGCGGAGGATCTTGAACA‑GGCAGACGCCGGTGGCGACCGAGACGTTCAGGCTGCTGACGCTGCCGGCCATCGGCAACCTGGCGAGGAAGTCGCAGTGC > NC_008463/5809158‑5809450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |