| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_008463 | 3175697 = | 360 (0.720) | 404 (0.890) | 194/272 | 0.4 | 56.0% | intergenic (+390/+106) | PA14_RS30505/PA14_RS14515 | hypothetical protein/hypothetical protein |
| ? | NC_008463 | = 3177289 | 306 (0.670) | intergenic (‑69/‑218) | PA14_RS14525/PA14_RS14530 | hypothetical protein/Tn3 family transposase | |||||
Only 100 of 811 total aligned reads displayed.
GAGAGGATCGCGAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTGCTCTGAAAGGCTTTCT > NC_008463/3177140‑3177438 | gagGATCGCGAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGca < 1:3085698‑M2/150‑3 (MQ=255) agGATCGCGAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcat > 1:6998264‑M2/1‑147 (MQ=255) ggATCGCGAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcatt > 1:5567453‑M2/1‑146 (MQ=255) gATCGCGAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcatta > 1:2223147‑M2/1‑145 (MQ=255) gATCGCGAGACGGCGCGTACAGCGTCGCTGGATCGATCAGTTGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcatta < 1:3586539‑M2/150‑6 (MQ=255) cgAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcga > 1:6175434‑M2/1‑140 (MQ=255) cgAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcga < 1:1979937‑M2/150‑11 (MQ=255) gagaCGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaa < 2:1596205‑M2/150‑12 (MQ=255) gaCGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagc < 2:1930550‑M2/150‑14 (MQ=255) aCGGCGCGTCCAGCGGCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagcc > 1:9965647‑M2/1‑136 (MQ=255) ggCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagcctt < 2:1057997‑M2/150‑17 (MQ=255) ggCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagcctt > 2:2582185‑M2/1‑134 (MQ=255) cgcgTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaa > 2:5642869‑M2/1‑132 (MQ=255) gcgTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaag < 2:3991224‑M2/150‑20 (MQ=255) gTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCCACATACGGCCGAGcattatgcgaagccttaagca < 1:8454224‑M2/150‑22 (MQ=255) tACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcat < 1:8157909‑M2/150‑23 (MQ=255) cAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcattt < 2:9229732‑M2/150‑25 (MQ=255) cAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTaa > 1:4053739/1‑150 (MQ=255) cAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTaa > 2:10091565/1‑150 (MQ=255) aGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAg < 2:3027127/150‑1 (MQ=255) cGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttcca > 1:5780197‑M2/1‑123 (MQ=255) tCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccagg > 2:2440510‑M2/1‑121 (MQ=255) cGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggc > 1:1779030‑M2/1‑120 (MQ=255) cTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcgg < 1:9100654‑M2/150‑33 (MQ=255) gatcgatcAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGt > 2:5851694/1‑150 (MQ=255) atcgatcAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccag < 1:3875549‑M2/150‑37 (MQ=255) atcgatcAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTa < 2:6853091/150‑1 (MQ=255) tcgctcAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccagg > 2:7967613‑M2/1‑113 (MQ=255) atcAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatc < 1:1462759‑M2/150‑41 (MQ=255) tcAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATGGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatcc > 2:3673197‑M2/1‑109 (MQ=255) cAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGtct < 1:10987852/150‑1 (MQ=255) tgctgcGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggcgaggatccacgaa > 1:5371400‑M2/1‑104 (MQ=255) tgctgcGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaa > 1:9407157‑M2/1‑104 (MQ=255) tgcGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTa < 2:7025232/150‑1 (MQ=255) gcGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCACGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAg > 2:1022435/1‑150 (MQ=255) gcGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAg < 2:5104315/150‑1 (MQ=255) ggTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccc > 1:7611554‑M2/1‑98 (MQ=255) tACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttatgcatttccaggcggccaggatccacgaaaaaccccg < 2:137001‑M2/150‑55 (MQ=255) ggAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGa > 2:3238125/1‑150 (MQ=255) agagGGTCAGGCTTGCGCTTAATCGGCCCTATGTTACGCGCCGCCCGGCGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGCGcattatgcgaagcggtatgcatttccaggcggccaggatccacgaaaaaccccggagagcg < 2:5774996‑M2/150‑62 (MQ=255) gagGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgc > 1:10003970‑M2/1‑88 (MQ=255) agGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTAGTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagcctttagcatttccaggcggccaggtgcctcgaacttccccggagctcgcg < 1:9809952‑M2/150‑64 (MQ=255) tCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctac < 1:1306468‑M2/150‑68 (MQ=255) tCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTccc < 2:3849409/150‑1 (MQ=255) cAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCa < 1:8299890/150‑1 (MQ=255) ggCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccgg < 1:6477000‑M2/150‑71 (MQ=255) ggCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCaaa > 1:10208576/1‑150 (MQ=255) gCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAAt < 2:9094421/150‑1 (MQ=255) cTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccgggg < 2:8249360‑M2/150‑73 (MQ=255) ttGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggt < 2:837162‑M2/150‑74 (MQ=255) tGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCACAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATATTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCgg < 2:766637/150‑1 (MQ=255) gcATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttcc < 1:3394989‑M2/150‑78 (MQ=255) cATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttcct < 2:8919109‑M2/150‑79 (MQ=255) aaTCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgc > 2:6408337‑M2/1‑69 (MQ=255) aTCGGCCCTATGTTACGCGCCGCCCGGCGCCGCCGTATTGTCCGGGCGGCGCACAACATAAGGCCGAGcattatgcgaagccttaagcaattccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgct > 1:3286599‑M2/1‑68 (MQ=255) tCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctt > 1:10832139‑M2/1‑67 (MQ=255) gCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttct > 2:2267165‑M2/1‑64 (MQ=255) ccTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCATCATAAGGCCGAGcattatgcgaagcctttagcatttccaggcggccaggatccacgaaaaaccccggagagcgctctagcggggtttccttggtttctag < 2:6300196‑M2/150‑89 (MQ=255) ccTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCAt > 1:9568850/1‑150 (MQ=255) ctaaggtACGCGCCGCCCGGAGCCGCCCTATTGTCCGGGCGGCGCTCAACATAAGGCCGCGCATTAAGCGAAGCACGAGTGTTACGGCCAAATAGTAATGTCTCGATCGAGCCAAAAAGAAATGTCCCAAATCGGCGTCTAGGGGTCATg < 2:6089465/144‑1 (MQ=255) tGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccag < 1:6789094‑M2/150‑93 (MQ=255) gTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCga < 2:11008653/150‑1 (MQ=255) aCGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGAt > 1:9004912/1‑150 (MQ=255) cgcgCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaag > 1:4597447‑M2/1‑53 (MQ=255) cgcgCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATa < 1:4775218/150‑1 (MQ=255) cgccgcCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAg > 2:1043920/1‑150 (MQ=255) gccgccCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAgg < 1:7997662/150‑1 (MQ=255) ccgccCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggaggccaggatccacgaaaaaccccggagatcgctctaccggggtttcctggctttctagccagtgaagcatt < 2:2769023‑M2/150‑102 (MQ=255) ccgccCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAggg > 2:7474845/1‑150 (MQ=255) cccGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatc < 2:5235476‑M2/150‑105 (MQ=255) cccGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatc > 2:4356157‑M2/1‑46 (MQ=255) acgGAGCAGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccataagcaattccaggcggcccggatccacgaaaaaccccggagatcgctctaccggtgtttccttgctttctagccagttaagccttatcg < 1:593763‑M2/149‑106 (MQ=255) cGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcgg < 1:8603606‑M2/150‑107 (MQ=255) ggAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcagtatgcgaagccttaagcatttccaggcggccaggatccacgaacaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggt < 2:9669534‑M2/150‑108 (MQ=255) gAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggta < 2:853042‑M2/150‑109 (MQ=255) gAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCACGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAatt > 2:10789985/1‑150 (MQ=255) gccgccGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAattca < 2:10723651/150‑1 (MQ=255) ccgccgTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAattcat < 2:6591722/150‑1 (MQ=255) ccgTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAAttcattca > 1:8773602/1‑150 (MQ=255) gTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacc > 2:7870414‑M2/1‑34 (MQ=255) tATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCAttt > 1:160621/1‑150 (MQ=255) aTTGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccg < 1:7868864‑M2/150‑119 (MQ=255) ttGTCCGGGCGGCGCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccga < 2:8095611‑M2/150‑120 (MQ=255) gTCAGGGCGGCGCTCAACAAAAGGCCGAGCATTATGCGAAGCAATAGTGTTAAGCACAAATAGTAATGACTCGATCGAGCCAAATAGAAATGTCACAAATCGGCGGCAAGGTGTCATGCCGATATAAGGGGAAAATTCATTCAATTGGaa > 2:7280206/1‑150 (MQ=255) gggCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTa > 2:9847428/1‑150 (MQ=255) ggcgCTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaaca < 1:6569390‑M2/150‑130 (MQ=255) cTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccg > 1:5087717‑M2/1‑17 (MQ=255) cTCAACATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccg < 1:6347600‑M2/150‑134 (MQ=255) cTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTg > 2:8655293/1‑150 (MQ=255) aaCATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCACATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTGctc < 1:2541727/150‑1 (MQ=255) aCATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccgcaac < 1:2737773‑M2/150‑138 (MQ=255) cATAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccgcaacg < 2:1190410‑M2/150‑139 (MQ=255) cATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTGCTCTg > 2:4742722/1‑150 (MQ=255) tAAGGCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccgcaacgta > 1:4447420‑M2/1‑10 (MQ=255) tAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTGCTCTGaa > 2:3423625/1‑150 (MQ=255) tAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTGCTCTGaa > 1:7156268/1‑150 (MQ=255) gCCGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccgcaacgtacgaa < 1:10433807‑M2/150‑145 (MQ=255) gCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTGCTCTGAAAGGc > 1:7453928/1‑150 (MQ=255) ccGAGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccgcaacgtacgaat > 2:1762470‑M2/1‑5 (MQ=255) aGcattatgcgaagccttaagcatttccaggcggccaggatccacgaaaaaccccggagatcgctctaccggggtttccttgctttctagccagtgaagccttatcggttagtccacccgatgcttcaacacccgcaacgtacgaatgtc < 2:947921‑M2/150‑149 (MQ=255) | GAGAGGATCGCGAGACGGCGCGTACAGCGTCGCTTGATCGATCAGATGCTGCGGTACAGGGAGAGGGTCAGGCTTGCGCATAATCGGCCCTATGTTACGCGCCGCCCGGAGCCGCCGTATTGTCCGGGCGGCGCTCAACATAAGGCCGAGCATTATGCGAAGCAAGAGTGTTAAGGCCAAATAGTAATGTCTCGATCTAGCCAAATAGAAATGTCCCAAATCGGCGTCTAGGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAGCCATTGCTCTGAAAGGCTTTCT > NC_008463/3177140‑3177438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |