Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084634,616,4480GC25.2% 297.7 / 36.2 160intergenic (‑168/+34)hda/PA14_RS21180DnaA regulatory inactivator Hda/DUF2066 domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (65/54);  new base C (37/3);  total (103/57)
Fisher's exact test for biased strand distribution p-value = 6.59e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 164 total aligned reads displayed.

TCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCA  >  NC_008463/4616299‑4616597
                                                                                                                                                         |                                                                                                                                                         
 ccGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑Gc                                                                                                                                                          <  1:714576/150‑1 (MQ=255)
 ccGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑Gc                                                                                                                                                          <  2:10751370/150‑1 (MQ=255)
  cGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑t                                                                                                                                                        <  1:2538308/150‑1 (MQ=255)
   gAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑Tc                                                                                                                                                       <  2:5671922/150‑1 (MQ=255)
     aaaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCccgcc‑c‑gcagcg                                                                                                                                                      >  2:6606641/1‑146 (MQ=255)
      aaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑Gt                                                                                                                                                   <  1:4280314/150‑1 (MQ=255)
      aaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑Gt                                                                                                                                                   <  1:5841188/150‑1 (MQ=255)
        cgccgcAGGAGTCACCGTAATGGCTTCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTg                                                                                                                                                 <  1:5172100/150‑1 (MQ=255)
         gccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑C‑CG‑TCC‑GCTGc                                                                                                                                                >  2:6347056/1‑150 (MQ=255)
          ccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCa                                                                                                                                               <  2:9441983/150‑1 (MQ=255)
          ccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCa                                                                                                                                               <  1:10772668/150‑1 (MQ=255)
           cgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GG‑TCC‑GGAGCAt                                                                                                                                              >  2:6901198/1‑150 (MQ=255)
             cAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAg                                                                                                                                            <  2:5008255/150‑1 (MQ=255)
               ggAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGa                                                                                                                                          <  1:6861750/150‑1 (MQ=255)
                gAGTCACCGTAAAGGCTGCAAAGTTTATCCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAg                                                                                                                                         <  1:8558654/150‑1 (MQ=255)
                 aGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGc                                                                                                                                        <  1:6184135/150‑1 (MQ=255)
                  gTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑C‑CC‑GCC‑GGTGGCTAggcggg                                                                                                                                       >  2:140713/1‑146 (MQ=255)
                  gTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑CC‑GAC‑CTTGCATAGGcgcg                                                                                                                                       >  2:3333110/1‑150 (MQ=255)
                  gTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCCGCC‑C‑CC‑TCC‑GGTGCAAAGGAGCg                                                                                                                                       >  2:8862530/1‑150 (MQ=255)
                   tCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑CC‑GCC‑GGTGCATATGAGCgg                                                                                                                                      >  2:4279087/1‑150 (MQ=255)
                    cACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGa                                                                                                                                     <  1:3840986/150‑1 (MQ=255)
                     aCCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGAt                                                                                                                                    <  1:6146533/150‑1 (MQ=255)
                     aCCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGAt                                                                                                                                    <  1:9351195/150‑1 (MQ=255)
                     aCCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑ACC‑GGTGCAATGGAGCGGag                                                                                                                                    >  2:5748005/1‑149 (MQ=255)
                      ccGTCAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAACATCCAAGTTTTGCCGATCGCCGAGGCTCCTGGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATc                                                                                                                                   <  2:1394270/150‑1 (MQ=255)
                      ccGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCTCAATGAGCTACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATc                                                                                                                                   <  2:8178432/150‑1 (MQ=255)
                      ccGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATc                                                                                                                                   <  2:8331854/150‑1 (MQ=255)
                      ccGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑CC‑GAC‑GTTTCATAGGAGCggttg                                                                                                                                   >  2:9761384/1‑147 (MQ=255)
                      ccGTAAAGGCTGCAAAGCTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATc                                                                                                                                   <  2:7051752/150‑1 (MQ=255)
                        gTACAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCgg                                                                                                                                 <  2:4802897/150‑1 (MQ=255)
                        gTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACATTGAGCAACTAGGCAAGCAAAATCAAAGGTGTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑CC‑GCC‑GGTGCATACGAGCCGATggg                                                                                                                                 >  2:3502706/1‑150 (MQ=255)
                        gTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACNAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑GAC‑CGTGCCTAGGAggggcggcg                                                                                                                                 >  1:5788265/1‑145 (MQ=255)
                           aaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑ACC‑CGGTCATAGGAGCGGAAGGgcgc                                                                                                                              >  1:10760737/1‑150 (MQ=255)
                             ggCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GGCGGCC‑C‑CC‑CCC‑CGTGGATAGGAGCGGAGCGgcgcgc                                                                                                                            >  1:5350052/1‑150 (MQ=255)
                               cTGCAAAGTTTATCCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCg                                                                                                                          <  2:3114041/150‑1 (MQ=255)
                               cTGCAAAGTTTATACGCCTCGGCACGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCAATAGCTTCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCg                                                                                                                          <  1:9376348/150‑1 (MQ=255)
                               cTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGCGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCg                                                                                                                          <  2:9628296/150‑1 (MQ=255)
                                    aaGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑C‑CC‑ACC‑CGTGCCGTGGATCGGATCGGGGCGcccccaaa                                                                                                                     >  1:818218/1‑144 (MQ=255)
                                       tttATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GGCGGCC‑C‑GC‑ACC‑GGTTGATATTAGCGGGGCGGGGCGCCGGCaca‑cag                                                                                                                 >  1:1193207/1‑148 (MQ=255)
                                       tttATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑GCC‑GGGTGATAGGGGCGGGTCGGCGCGCCGCCaca‑cag                                                                                                                 >  1:6133116/1‑148 (MQ=255)
                                        ttATACGCCTCGGCAAGGCCGCAAAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCAGATATCCGAGTCTCCTTTCCCAGAGCATCGGCCGATCGA‑GG‑GACGCCC‑C‑AC‑ACA‑GGTTGATAGGAGCGGAACGGAGCGCCGACACC‑CTGc                                                                                                                >  2:9747393/1‑150 (MQ=255)
                                         tataCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑C‑GC‑GCC‑GTTTGCTATGAGCGGGTAGGCGCGCCGACACA‑CAGcc                                                                                                               >  2:4010435/1‑150 (MQ=255)
                                              gCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑CGGG‑CCC‑GTTGC‑TAGGGGGGGGTGGGCCCGCCCACGCA‑CTGCCAGccg                                                                                                          >  1:11017950/1‑148 (MQ=255)
                                                   ggCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCCGCC‑C‑GC‑GCC‑GGTGGATAGGAGCGGGTCGGCGCGCCGCCTCA‑CTGCCACCGGAAAtt                                                                                                     >  2:8622699/1‑150 (MQ=255)
                                                       aGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑GCC‑GGTGCCAAGGAGCGGATCGGCGCGCCGCCACA‑CAGCCACCGGGAAATAA‑Gt                                                                                                >  2:10425163/1‑150 (MQ=255)
                                                       aGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCCGCC‑C‑CC‑GAC‑GTTGCCTAGGAGCGGGTCGGCGCGCCGACGCC‑CAGCCAGCGGTCAATCA‑Gt                                                                                                >  2:6284651/1‑150 (MQ=255)
                                                         gCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GGTGCATAGGTGCGGATCGGGGCGCCGACGCA‑CTGCCCGCGGGAATAAA‑GTTg                                                                                              >  2:9124128/1‑150 (MQ=255)
                                                         gCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑CTTTCATAGGAGCGGATAGGGGCGCCGACTCA‑CTGCCAGCGGAAAATAA‑GTTg                                                                                              >  2:9124179/1‑150 (MQ=255)
                                                            gCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑C‑CC‑GCC‑GTTGCATAGGAGCGGGTCGGCGGGCCGACTCA‑CAGCCAGCGGGAAATCA‑CTTgggc                                                                                           >  2:2501843/1‑149 (MQ=255)
                                                                 aTGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GGCGGCC‑C‑GCGCCC‑GTGGCA‑AGGAGCGGATCGGCGCGCCGGCACA‑CAGCCACCCGGAAGTAA‑GTTGGggcgacg                                                                                      >  2:1482676/1‑150 (MQ=255)
                                                                 aTGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCCGCC‑C‑GC‑GCCGGGTGC‑TAGGAGGGGGACGGCGCGCCGGCACA‑AAGCCCGCGGAGATAAA‑GTGGGggcgacg                                                                                      >  2:854845/1‑150 (MQ=255)
                                                                   gAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑C‑CC‑ACC‑CGTGCAGAGGAGCGGAGCGGCCCGCCCACGCA‑CAGCCAGAGGCAAATCA‑GTTTGgaagaccac                                                                                    >  2:2491094/1‑150 (MQ=255)
                                                                    aGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGCC‑C‑CC‑GCC‑GTTTCATAGGAGGCGGTCGGCGGGCCCCCAAA‑CAGCCCCCCGGAATTCA‑GTTTGggcgacgaag                                                                                   >  1:10000047/1‑148 (MQ=255)
                                                                        aCTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑CC‑GCC‑GTTGCATAGGAGCGGATACGCGCGCCGACTCA‑CTGCCCGCGGGAATTCA‑GTTGGGGCGCCGACGGCAc                                                                               >  2:7941022/1‑150 (MQ=255)
                                                                                 gcaaAATCAATGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCCGCC‑C‑CC‑GCC‑GTTTCCTAAGGGCGGATCGGCGCGCCCACGCA‑AAGCCCCCGGGAAATAA‑GTTGGGGCCACGGAGGCCCCGCCgcgcc                                                                      >  2:2443207/1‑149 (MQ=255)
                                                                                       tCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GGCGGCC‑C‑CCGCCC‑GTTG‑ATTTGAGCGGGTAGGCGGGCCCGCCCA‑CAGGCAGCCGAAATTAA‑TTTGGGACGTCGACGGCACCCCCGCGCGGGgggc                                                                >  2:2750669/1‑150 (MQ=255)
                                                                                        cAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑CC‑TCC‑GGTGCCTATGAGCGGATCGGCGCGCCGCCACA‑CCTCCAGCGGCACTTAA‑AGTGGGTCGACCACGGCACCCCCGCCCAGGgcgcc                                                               >  2:3402051/1‑149 (MQ=255)
                                                                                          aaGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCCGCC‑C‑GC‑TCC‑CGTGGCTTGGAGCCGAAAGGCGCGCCGACAAA‑CGGCCAGCCGCAATAAC‑GTTGGGCCGACCAAGGCACCCCCGCGCTGGgcgcggg                                                             >  2:5203831/1‑147 (MQ=255)
                                                                                           aGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCGGGC‑C‑GC‑TCC‑CGTGGATAGGGGCGGATCGGCGCGCCGGCGCT‑CAGCCACCGGGACTTCA‑GGTGGGCCGGCGGCGGCACCCGCGCGCGGGGCGCTGCg                                                            >  2:7178165/1‑150 (MQ=255)
                                                                                           aGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑CC‑GCC‑CGTGGATTGGAGCGGGTCGGCGCGCCGCCCCG‑CGGCCCGCGGGAAATAA‑GGTGGGACGCCGACGGCACCCCCGCGCGGGGCgcggcg                                                            >  2:351514/1‑150 (MQ=255)
                                                                                              tttGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCCGCC‑C‑GC‑TGC‑GATGCATAGGAGCGGATAGGCGCGCCCCCACA‑CAGCCAGCCGAACATAA‑GTTGGGACGACAACCGCACCGCCGCGCAGGGGGCGGCGGGc                                                         >  2:1792833/1‑150 (MQ=255)
                                                                                                tGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GGTGCATAGTAGCGGGTCGGCGCGCCGACTCA‑CAGCCAGCGGAAATTCA‑GGTTGGACGACGACGGCACCCCCCCGCGGGGCGCTGCGGGCTg                                                       >  1:5541249/1‑150 (MQ=255)
                                                                                                 gCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GGCGGGC‑C‑GC‑CCC‑CGTGCATAGGAGCGGGGCAGCGCGGCCGCGCC‑CCGCCCGCGGGAATTGA‑TGTGGGGCGACGACGGCGCCCCCCCCCGGGGCGCGGCggggggg                                                      >  2:3153365/1‑146 (MQ=255)
                                                                                                  ccGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCCGCC‑C‑CC‑GCC‑GGTGGATAGGGGGGGTTGGGGGCGCCGCCGCC‑CAGGCACCGGCAAATGA‑GGTTGGGCGGCGCCGGCACCCCCGCCCGGGGCGGGGcgggcgggg                                                     >  2:1149322/1‑149 (MQ=255)
                                                                                                   cGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGG‑GCCGCCC‑C‑CG‑ACC‑GTTGC‑TAGGTGCGGCTCGGCGCGCCGACGCACCTGCC‑CCGGGCAATAA‑TGTGGGGCGGCGACGGGCACGCCGCGCGGGGGGCGGCggggggggc                                                    >  2:5704220/1‑144 (MQ=255)
                                                                                                     aTAGCCGAGGCTCCTTGCCCAGTGCATCGGCCGGTCGC‑GG‑GGCGGCC‑C‑GC‑GCC‑GTGGCCTTTGCGCGGGTCGGCGGCCCGCCGCA‑CAGGCCGCGGGCATTAC‑GTGGGGACGACGCGGGGCCCGCCGCGCGGGGGGCTGAGGGGGGGCCgg                                                  >  2:6092366/1‑150 (MQ=255)
                                                                                                        gCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GCGGCCGGCCGC‑GC‑‑CC‑GTTGCA‑ATGGGCGGAGCGGGGCGCCCACTCA‑CAGCCAGCGGGAATTAA‑CTTGGGCAGCCGTCCGCCCCCCCCCGCGGGGCGCGGCGGGCAGGCCGGAgg                                               >  2:3580456/1‑150 (MQ=255)
                                                                                                             ggCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCCGCC‑C‑CG‑GGC‑GTTGACGGGGTGCGGTACGGCGGCCCGCCACA‑CGGCCCGCCGCAATTCA‑GTTGGGGCGGCGGCGGGACCCGCGCGCGGGGGGCTGCGGGCTGGCCGGAGGCAAcc                                          >  2:7830659/1‑150 (MQ=255)
                                                                                                              gccccTTCCCCAGACCATCGGCGGGCCGC‑GC‑GCCGGCC‑C‑CC‑CCC‑GTTGAATCGGCGCGGCTGGGCGCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCa                                         <  2:7822289/147‑1 (MQ=255)
                                                                                                                cccTTCCCCACAGCTGCGGCGGGGCCC‑GG‑CCCGGCC‑C‑GG‑GCC‑TGTGCATCGGAGCGCCGGGGCCCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGc                                       <  1:7826126/149‑1 (MQ=255)
                                                                                                                 ccTTGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCCGGC‑C‑GCGGCC‑GTGGC‑TAGGGGCGGGTCGGGGCGCCCGCGAC‑CAGGCCGCCGGACTTCA‑GGTGGGGCGGCCGCGGCACCGCCGCGCGGGGGGGCGCGGGGGGGGCGGCGGCCTcccccg                                      >  2:9512001/1‑146 (MQ=255)
                                                                                                                 ccTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑CCC‑GGTGCATTGGAGCGGCTCCGCGCGCCCACACC‑AAGCCCCCCGGAAATCA‑CTTGGGTCCACCACCGCACCCCCCCCCAGGGCGCGGCGGGCTGGCCGGAGGGATACACCg                                      >  2:5925929/1‑150 (MQ=255)
                                                                                                                  cgcccccAGCGCTGCGGCCGGGCGC‑GC‑GCCGCCC‑C‑GC‑TCC‑TTGCCTTCGGCGGGGCGCGGCCCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCgg                                     <  2:9274868/146‑1 (MQ=255)
                                                                                                                   ttGCCCAGAGCATCGGCCGGTCGC‑GG‑GCCCGCC‑C‑CC‑GCC‑GGTGGAAAGGAGCGGGTCGGCGCGCCCGCACA‑CATCCAGCGGAAATTAATGTTGGG‑CGAAGAAGGCAACCCCCCCCAGGGCGGTGCGGGGTTGGCGGGGGCAAACAGCGGt                                    >  2:1577635/1‑150 (MQ=255)
                                                                                                                   ttGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGGC‑C‑CC‑ACC‑CGTTCATATGAGCGGGTCGGCGCGCCGACGCA‑CTGCCCCCGGAAAATCA‑ATTGGGACGACCCCGGCACCCCCGCGCTGGGGGCGGCGGGGGGGGCCGCGGCCACCAGCGGt                                    >  2:5228493/1‑150 (MQ=255)
                                                                                                                    ggCCCTGCGCCTCGGCCGGCCGC‑GC‑CCCGGCC‑C‑GC‑TCC‑GTGGCAGCGGAGCGCATCGGCGCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTa                                   <  2:9872229/149‑1 (MQ=255)
                                                                                                                     gCCCAGAGCATCGGCCGGTCGC‑GG‑GCCCGCC‑C‑CC‑ACC‑GGTTGATAGGTGCGGGGGGGCGCGCCGCCACA‑CAGCCAGCGGTAAATCA‑TGTGGGACGACGAACGCCCCCCCCCCCGTGGCGCGGCGGGCGGGGCGGAGGCCTCCCGCgggaa                                  >  2:4503270/1‑147 (MQ=255)
                                                                                                                      cccAGAGCATCGGCCGGTCGC‑GG‑GGCCGCC‑C‑CC‑ACCGGTTGCA‑ATGGGCGGCGAGGCGGGCCGCCTCA‑CAGGCCCCGGGAATTGA‑CTTGGGGCGGCCGCGGCCCCGCCGCGCGGGGCGCGGCGGGGGGGGCGGGGGCCACCCGCgggtcg                                 >  2:5853630/1‑146 (MQ=255)
                                                                                                                       ccAGAGCCGCGCCGGGACGC‑GC‑GCCGGCC‑C‑GC‑GCC‑TGTCCATCGTTGGTGAGCGGCCCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGc                                <  1:1627746/150‑1 (MQ=255)
                                                                                                                        cAGAGCATCGGCCGGTCGC‑GG‑GCCCGCC‑C‑GC‑TCC‑CGTTCCTAGGGGCGGAGCGGCGCGGCGTCTAC‑CAGGCAGCCGAAAATGA‑GTTGGGACCGCGGCGGCACCGCCCCGCGGGGGCCTGCGGGCTTGCCGGCGGGATACCGCCGTTCGcg                               >  2:6815208/1‑149 (MQ=255)
                                                                                                                          gacccgcggcggGCCGC‑GC‑GCCGCCC‑G‑GC‑TCT‑GTTGCATGGGCGGGCCCGGGCGCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGt                             <  1:3319836/144‑1 (MQ=255)
                                                                                                                          ctccagcGGCCGGAGGG‑GC‑CCCGCCC‑C‑GC‑TCG‑GGTCATTCGGAGCGGAGGGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGt                             <  2:7718501/144‑1 (MQ=255)
                                                                                                                           cgctgcGGCCGGGCGC‑GC‑CCCGGCC‑C‑GC‑TCG‑TTTGCTGAGGTGGGGCGGGGCGCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTc                            <  1:10708160/145‑1 (MQ=255)
                                                                                                                            gatgcggcggGTCGC‑GC‑GCGGGCC‑C‑GC‑GCC‑GTTGCATCGGTGCGGATGGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCg                           <  2:7069565/146‑1 (MQ=255)
                                                                                                                            cccccggccggcCGC‑GC‑GCCGCCC‑C‑CC‑GCG‑GTTGCATTGGCGGGGAGCGGCGCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCg                           <  2:758784/146‑1 (MQ=255)
                                                                                                                                    gggTGGC‑GC‑GCGGGCC‑C‑GC‑GCG‑GTCGCTTGGGCCGGGAGCGGCGCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCGGTCGGCCGGGAt                   <  2:3967448/149‑1 (MQ=255)
                                                                                                                                        cgc‑gc‑gCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCC‑CTGCCAGCGGGAATTCA‑GTTGGGGCGTCGACGGGACCGCCGCGCGGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGGtttac               >  1:2741504/1‑148 (MQ=255)
                                                                                                                                        cgc‑gc‑gCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑ATGCCAGCGGAAAATCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGGCGGAGGCATCCCGCGGTACGCTGTCGGCCGGGATTTcc               >  1:2741284/1‑150 (MQ=255)
                                                                                                                                         gc‑gc‑gcCGGCC‑C‑GC‑TCC‑TTTTCTTTGGCGCGGCCGGGCGCCCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCt              <  1:5351092/150‑1 (MQ=255)
                                                                                                                                                ccGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAAc         >  1:10761827/1‑150 (MQ=255)
                                                                                                                                                 cGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACt        >  1:9705022/1‑150 (MQ=255)
                                                                                                                                                   gCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTgc      >  2:10360320/1‑150 (MQ=255)
                                                                                                                                                    cc‑c‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCCGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTgcg     >  1:2065452/1‑150 (MQ=255)
                                                                                                                                                    cc‑c‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTgcg     >  2:1118319/1‑150 (MQ=255)
                                                                                                                                                    cc‑c‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTgcg     >  2:1114899/1‑150 (MQ=255)
                                                                                                                                                       c‑gc‑gCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGACATTCC‑GGTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTGCGCTGTCGGCCGGGATGTCCTGCCGCTgcgcg   >  2:7981654/1‑149 (MQ=255)
                                                                                                                                                       c‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCCGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGcc   >  2:7846915/1‑150 (MQ=255)
                                                                                                                                                       c‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCCACTGCGcc   >  1:4565690/1‑150 (MQ=255)
                                                                                                                                                       c‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGcc   >  1:4565897/1‑150 (MQ=255)
                                                                                                                                                         gC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACACA‑CTGCCAGCGGAAATTCA‑GTTGGGAAGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTACTTCAACTGCGCCa  >  1:2053591/1‑150 (MQ=255)
                                                                                                                                                         |                                                                                                                                                         
TCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGC‑GC‑GCCGGCC‑C‑GC‑TCC‑GTTGCATAGGAGCGGATCGGCGCGCCGACTCA‑CTGCCAGCGGAAATTCA‑GTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCA  >  NC_008463/4616299‑4616597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑