| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,589,402 | C→T | intergenic (‑45/+1) | nuoK ← / ← nuoJ | NADH‑quinone oxidoreductase subunit NuoK/NADH‑quinone oxidoreductase subunit J |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,589,402 | 0 | C | T | 94.7% | 1528.9 / NA | 460 | intergenic (‑45/+1) | nuoK/nuoJ | NADH‑quinone oxidoreductase subunit NuoK/NADH‑quinone oxidoreductase subunit J |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (249/183); minor base G (24/0); total (276/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.17e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 465 total aligned reads displayed.
ATCAGTACGAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCCTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGCCGATGCCGG > NC_008463/2589254‑2589551 | atcaGTACGAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGAGGGCGCAGGGCGCCCGCCG‑ACCCtt > 2:6155427/1‑150 (MQ=255) tcaGTACGACCAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGCCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGGGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCttt < 1:7851342/150‑1 (MQ=255) gTACGAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCGTTAtt > 2:3223016/1‑150 (MQ=255) tACGAACAGGTTGTTGCGTCGCACCAACAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCGGTGTTCCTGTGGTATTGCTTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTg < 1:106097/150‑1 (MQ=255) tACGAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTg < 2:4577217/150‑1 (MQ=255) cGAACAGGATGTTGCGTCGCACCATCAAGCCGACCCGTCCGAGGGCGTACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGTACCGTTagggtt > 1:2682183/1‑145 (MQ=255) cGAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGtt < 2:11024647/150‑1 (MQ=255) gAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGttt > 2:7240888/1‑150 (MQ=255) gAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGttt < 2:10038678/150‑1 (MQ=255) gAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGttt > 1:3211707/1‑150 (MQ=255) aaCAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTg > 2:9479562/1‑150 (MQ=255) accggATGTGGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTgg < 1:4528040/147‑1 (MQ=255) aGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCg > 1:1585754/1‑150 (MQ=255) gtaTGTTGCTTCGCACCCCCACGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGt < 2:9229692/148‑1 (MQ=255) ggATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACTGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTACATAGCGTTCCGTGCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGt < 1:648696/150‑1 (MQ=255) aTGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGGTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCGGTATTGTTTGGCGTcg > 2:6533379/1‑149 (MQ=255) tGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCtt > 2:2398042/1‑150 (MQ=255) ttGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTgt > 1:2143/1‑149 (MQ=255) ttGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTga < 2:2504758/150‑1 (MQ=255) cGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTgacga > 2:8400107/1‑150 (MQ=255) gTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTgacgac < 2:4070141/150‑1 (MQ=255) agCACGATCAAGCCGAACAGTTCGATGGCGTACAGGTCGCTGGCGAGGGCCTGGCCGTGTTCCTGTGGTTTTGCGTTCATAGCGTTACCTTCCCTTGGGGCTGGCGCAGGGCGACAGCCGAACCTTTAGTGTTTGGCGTCTTGACGAccc < 2:8728258/149‑1 (MQ=255) cACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAg > 1:2366301/1‑150 (MQ=255) aCCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGGATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAgg > 2:7954309/1‑150 (MQ=255) aCCATCAAGCCGACCAGTCCGAGGGAGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAgg < 2:6416936/150‑1 (MQ=255) ccATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGt > 2:2886650/1‑150 (MQ=255) aTCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGCACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGa > 1:6663155/1‑150 (MQ=255) aaGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAg > 2:5708376/1‑150 (MQ=255) aGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAgg < 1:8035254/150‑1 (MQ=255) ccGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCa > 2:10333804/1‑150 (MQ=255) aCCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGTCGACCCAGGTGATAGGCAGCg > 1:6550117/1‑150 (MQ=255) aGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGAcc > 1:9507993/1‑150 (MQ=255) gTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCa > 1:5671625/1‑150 (MQ=255) tCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAg < 2:5513359/150‑1 (MQ=255) ccGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAgg > 2:10901808/1‑150 (MQ=255) cGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAggg > 2:7507351/1‑150 (MQ=255) gAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTTTTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGc < 1:3635710/150‑1 (MQ=255) gggCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCcg > 2:10596588/1‑150 (MQ=255) cGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGa > 1:9154308/1‑150 (MQ=255) cAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGGTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCaa < 1:2609225/150‑1 (MQ=255) aGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAAc < 1:543650/150‑1 (MQ=255) gACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAg > 2:4801696/1‑150 (MQ=255) cGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCa < 2:2662118/150‑1 (MQ=255) ggCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGa < 2:4158455/150‑1 (MQ=255) aGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATCGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGcc < 1:8766778/150‑1 (MQ=255) aGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGcc < 1:5195658/150‑1 (MQ=255) aGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGcc > 1:8249698/1‑150 (MQ=255) gggCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCa > 2:1193575/1‑150 (MQ=255) gggCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCa < 1:7105295/150‑1 (MQ=255) cAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTc < 1:686107/150‑1 (MQ=255) ggCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGa > 1:8884138/1‑150 (MQ=255) ccGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGacc > 2:6702520/1‑150 (MQ=255) ccGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCGTTATTGTTTGGCGGCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTGCGacc > 1:3727919/1‑150 (MQ=255) gtgtTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGaccac < 1:8142116/150‑1 (MQ=255) cggtCCAGAGGTACTCCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGCGCGCCCGCCGAACCTTGATGGATAGGCGTCTTGACGACCCAGCAGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGaccacc < 2:9555948/147‑1 (MQ=255) ttCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACcag > 1:10465751/1‑150 (MQ=255) tCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACcagc < 1:9921311/150‑1 (MQ=255) aGTGGTTTTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAgg < 1:10493741/150‑1 (MQ=255) gTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGt < 2:5950713/150‑1 (MQ=255) ttGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGc < 1:407133/150‑1 (MQ=255) ttCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCCAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGGACGGGCCGTag > 1:10256806/1‑150 (MQ=255) tCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTGTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTaga > 1:2118188/1‑150 (MQ=255) cATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCCGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGCCCACCAGCAGGTACGGGCCGGagag > 1:7612588/1‑150 (MQ=255) aTAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAgg > 1:10738536/1‑150 (MQ=255) aGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCt < 1:9376948/150‑1 (MQ=255) aGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCt > 2:8548873/1‑150 (MQ=255) aGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCt < 1:1246863/150‑1 (MQ=255) cGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGa < 1:9744581/150‑1 (MQ=255) gTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGAt > 2:4961291/1‑150 (MQ=255) gTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGAt > 1:10839463/1‑150 (MQ=255) ttACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATg > 1:5094829/1‑150 (MQ=255) tACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGc < 1:2879224/150‑1 (MQ=255) aCGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGcc < 1:7237696/150‑1 (MQ=255) aCGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGcc < 2:9102004/150‑1 (MQ=255) aCGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGcc < 1:1727522/150‑1 (MQ=255) ttCCCTTGGGGCGGGCGCAGGGCGCCCGCCGCACCTTTATTGTTTGGCGTCTTTACGACCCAGGTGATTGGCAGCGACCAGGGCCGCGAGCAACAGCAATGAGGCCAGTTCGACCCCCAGCAGGTACGGGCCGTAGAGGCTGATGCCGAc > 1:4851047/1‑150 (MQ=255) ttCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGAc < 2:5434600/150‑1 (MQ=255) ttCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCGTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGAc > 1:6171694/1‑150 (MQ=255) gtCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTAGTGTCTGGCGTCTTGCCGACCCAGCTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCCTGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGCGGCTGATGCCGAc < 2:9840639/149‑1 (MQ=255) tCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGAcc < 2:2143911/150‑1 (MQ=255) tCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGAcc < 1:4214437/150‑1 (MQ=255) tCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGGTTGGCGTCTTGACGACCCCGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGAcc > 1:7751523/1‑150 (MQ=255) tCCCTTGGGGCGGGCGCAGGGCGCCCCCCGAACCATTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCAAGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGAcc > 1:10284348/1‑150 (MQ=255) cTTGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTGTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGcc > 1:4312516/1‑150 (MQ=255) ttGGGGCGGGCGCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCt > 2:3392761/1‑150 (MQ=255) gggcgCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTc < 2:1509958/150‑1 (MQ=255) gcgcgcAGGGCGCCCGCCGAACCTTTCTTCACTGGCCTCTCCACGACCCAGCTGATAGGCAGCGACCAGGGCCCCGAGCAACAGCCTGGAGGCCAGTTCGACCACCAGCAGGTACGCCCCGTAGAGGCTGATGCCGACCGCCTTGGCGTc < 2:7737342/148‑1 (MQ=255) ggcgCAGGGCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCt > 2:10514987/1‑150 (MQ=255) cAGGGCGCCCGCCGAACCTTTATTGTGTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCg < 2:5261267/150‑1 (MQ=255) cAGGGCGCCCGCCGAACCGTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCg > 2:186057/1‑150 (MQ=255) gggCGCCCGCCGAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTg > 1:3434788/1‑150 (MQ=255) ccgccgAACCTGTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATgg > 1:6020126/1‑150 (MQ=255) cgccgAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGc > 2:5091284/1‑150 (MQ=255) cgccgAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGc > 2:8819166/1‑150 (MQ=255) cgccgAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGc > 1:8562675/1‑150 (MQ=255) gccgAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGcc < 1:11026674/150‑1 (MQ=255) gccgAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGAGAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGcc < 2:7770883/150‑1 (MQ=255) ccgAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGCCg < 2:372844/150‑1 (MQ=255) cgAACCTTTATTGTTTGGCGTCTTGACGACCCAGGTGAGAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGCCGa < 2:10766176/150‑1 (MQ=255) aaCCTTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGCCGATg > 1:3327669/1‑150 (MQ=255) | ATCAGTACGAACAGGATGTTGCGTCGCACCATCAAGCCGACCAGTCCGAGGGCGAACAGGACGCTGGCGAGGGCCAGGCCGTGTTCCAGTGGTATTGCGTTCATAGCGTTACGTTCCCTTGGGGCGGGCGCAGGGCGCCCGCCGAACCCTTATTGTTTGGCGTCTTGACGACCCAGGTGATAGGCAGCGACCAGGGCCGCGAGCAACAGCATGGAGGCCAGTTCGACCACCAGCAGGTACGGGCCGTAGAGGCTGATGCCGACCGCCTTGGCGTCTACCGTGGTATGGCCGATGCCGG > NC_008463/2589254‑2589551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |