| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,787,867 | T→A | pseudogene (945/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,787,867 | 0 | T | A | 98.7% | 1421.6 / ‑4.2 | 378 | pseudogene (945/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base A (162/205); minor base C (3/2); total (169/209) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 378 total aligned reads displayed.
TCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑G‑TGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACC > NC_008463/2787728‑2788002 | tCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACTAggccgtgg < 1:4434491/150‑7 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaa > 2:1707972/1‑150 (MQ=255) tGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaaga < 1:3050614/150‑1 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcc < 2:4613874/150‑1 (MQ=255) gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcct > 1:8857261/1‑149 (MQ=255) aTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcctg < 2:2011497/150‑3 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCtggtg < 1:3925336/150‑1 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCtggtg > 2:5812697/1‑150 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCtggtg > 2:6858556/1‑150 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGa < 1:2445672/150‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGa < 1:4314314/150‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGa > 2:6552562/1‑150 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGa > 2:1328185/1‑150 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGaa < 1:8202313/150‑1 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAgg < 1:6090390/150‑1 (MQ=255) aaCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggc < 1:9496304/150‑1 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcg < 2:5019595/150‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcgg < 2:6463143/150‑1 (MQ=255) ccGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGAC‑ACGGCCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggc > 1:7635250/1‑150 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggcg < 2:10527141/150‑1 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAAACGGACCCTG‑CACA‑AGGGGGTCAAGGCGATCACCGTCTACGACAGCACCACCCTGGTTGACAATGAC‑GTGGCAAC‑GTTGAAGAAGAA‑CCTGTTGGAAtgagcggcg > 1:622742/1‑150 (MQ=255) ggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt > 1:2861649/1‑150 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg < 1:2183029/150‑1 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg > 2:5419938/1‑150 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg > 2:3264624/1‑150 (MQ=255) aaGTGGCCCAGGCGGTCGGCCATCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCTCCACCCTGGTGGTCAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGTAGGCGCGGCGCTgg < 2:5936708/150‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTgg < 1:10072589/150‑1 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt < 2:7847456/150‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGAt < 1:3865997/150‑1 (MQ=255) ccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgc < 1:7766233/150‑1 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg > 2:3415549/4‑150 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg > 1:3716479/4‑150 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg < 1:3346976/148‑1 (MQ=255) tcggCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctct < 2:8337059/147‑1 (MQ=255) ggCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc < 2:887498/149‑1 (MQ=255) ggCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc > 2:1800464/2‑150 (MQ=255) gCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc < 2:404514/150‑1 (MQ=255) ccAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCt < 1:7172862/150‑1 (MQ=255) cAGCGCCTGGAGGAGATCCCCCGGACCCTGCC‑CC‑AGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCGGGAGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTg < 2:10827943/150‑1 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTg < 2:9240183/150‑1 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt < 2:3099554/150‑1 (MQ=255) gcgcCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt > 1:4573516/1‑150 (MQ=255) gcgcCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt > 2:10330402/1‑150 (MQ=255) cgcCTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGATGGTGATCGCGGTGCTCTTCCTGTTc < 1:6426577/150‑1 (MQ=255) ccTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt < 2:4958940/150‑1 (MQ=255) ccTGGAGGAGATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt > 1:4339269/1‑150 (MQ=255) gaggagATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc > 1:2021889/1‑150 (MQ=255) gaggagATCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc < 1:91379/150‑1 (MQ=255) gaTCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCGTCCTGTTCCTCGGCAACAt > 1:4026381/1‑150 (MQ=255) aTCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 1:5954032/150‑1 (MQ=255) aTCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc > 1:3774584/1‑150 (MQ=255) aTCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 1:5314238/150‑1 (MQ=255) aTCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 1:7046224/150‑1 (MQ=255) aTCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 1:8071541/150‑1 (MQ=255) aTCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCGGTTCCTCGGCAACATc > 2:10676025/1‑150 (MQ=255) tCAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc > 2:4832379/1‑150 (MQ=255) cAACCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcg < 2:6191211/150‑1 (MQ=255) aCCGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg > 2:2148251/1‑150 (MQ=255) ccGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc < 2:2539411/150‑1 (MQ=255) cGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 2:9502910/150‑1 (MQ=255) cGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 1:4875243/150‑1 (MQ=255) cGGACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg > 2:3802848/1‑150 (MQ=255) ggACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGACGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCGGTTCCTCGGCAACATCCGCgcgg > 2:10195230/1‑150 (MQ=255) ggACCCTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcgg > 2:6037844/1‑150 (MQ=255) ccTG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 1:3219857/150‑1 (MQ=255) tG‑C‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGa > 2:7424493/1‑150 (MQ=255) cccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATc > 2:6800189/5‑150 (MQ=255) ccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGAC‑AAGTCCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa > 2:5600870/4‑150 (MQ=255) aaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc < 2:7296818/149‑1 (MQ=255) gggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGc > 2:6981085/1‑150 (MQ=255) gggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGc < 2:2663842/150‑1 (MQ=255) ggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccac < 1:5665804/150‑1 (MQ=255) gtcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccacc > 1:9727795/7‑150 (MQ=255) gtcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccacc < 1:7874434/144‑1 (MQ=255) caaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcat > 2:225492/5‑150 (MQ=255) aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca < 2:3612955/148‑1 (MQ=255) ggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatcat < 2:406884/149‑1 (MQ=255) gCGAGCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCGGGTGATCGCGGGGCTCTTCCTGTTCCTCGGCAACAGCCGCGCGGCGCTGATCACCGCCACCatcatc < 2:9697093/150‑1 (MQ=255) gATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATccc > 2:10036996/1‑150 (MQ=255) aTCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCg > 2:10130827/1‑150 (MQ=255) aCCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTg > 1:1640372/1‑150 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt > 1:1350620/1‑150 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt < 1:6680708/150‑1 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt < 1:4989903/150‑1 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt < 1:4161414/150‑1 (MQ=255) cTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt > 1:5303402/1‑150 (MQ=255) cTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGGTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt < 1:8482844/150‑1 (MQ=255) cTACGACCGAACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt > 2:8995344/1‑150 (MQ=255) tACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGACGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCACGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATg < 1:6303560/150‑1 (MQ=255) tACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGAGCACATCCAGTTCCTCCGCAACAGCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATg > 2:11034640/1‑150 (MQ=255) aCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc < 2:754308/150‑1 (MQ=255) aCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc > 1:6880442/1‑150 (MQ=255) aCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc > 1:8587263/1‑150 (MQ=255) cGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCt < 1:1068919/150‑1 (MQ=255) gACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGACGAA‑CCTGGTGGAAGGCGCGGCGCGGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTg < 1:3638724/150‑1 (MQ=255) aCCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt > 1:1258854/1‑150 (MQ=255) ccGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCCCCATCATCCCGCTGTCGATGCTGtt > 2:1593443/1‑150 (MQ=255) ccGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGtt > 2:8167966/1‑150 (MQ=255) gCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttca < 1:10000902/150‑1 (MQ=255) accaccCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcacc > 1:10245091/1‑150 (MQ=255) | TCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑C‑CC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑G‑TGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACC > NC_008463/2787728‑2788002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |