| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,909,637 | (G)5→4 | intergenic (‑133/+14) | PA14_RS17840 ← / ← brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,909,633 | 0 | G | . | 99.5% | 1898.5 / 3.8 | 388 | intergenic (‑129/+18) | PA14_RS17840/brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base . (194/191); total (194/194) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 423 total aligned reads displayed.
AAATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCG > NC_008463/3909483‑3909778 | aTGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggg < 2:3914898/151‑1 (MQ=255) tGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTgggg < 2:4078734/151‑1 (MQ=255) ccGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggtt > 1:10881042/1‑149 (MQ=255) gAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggttcg > 1:1748537/1‑147 (MQ=255) tCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTg < 1:1643611/151‑1 (MQ=255) tCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTg > 1:1848809/1‑151 (MQ=255) cggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGa > 1:4721999/1‑151 (MQ=255) cggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGa > 2:8445638/1‑151 (MQ=255) cggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGa > 1:2562008/1‑151 (MQ=255) gcggTCATGAAAACTCCCTCTTGCGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTGTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACg < 2:8398223/151‑1 (MQ=255) cggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGt > 2:6488975/1‑151 (MQ=255) ggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGtc < 2:7703510/151‑1 (MQ=255) cATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCa > 2:10217618/1‑151 (MQ=255) cATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCa < 2:8959484/151‑1 (MQ=255) aTGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAg > 2:791683/1‑151 (MQ=255) aTGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAg > 2:7559608/1‑151 (MQ=255) aaCTCCCTCGTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGAc < 2:3610816/151‑1 (MQ=255) cTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCg < 1:4988264/151‑1 (MQ=255) cccTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCt > 1:955627/1‑151 (MQ=255) tGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgc > 2:1888665/1‑151 (MQ=255) aGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCgg > 1:6101700/1‑151 (MQ=255) cggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCtt > 2:4216/1‑151 (MQ=255) ggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAATGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTg > 1:10056352/1‑151 (MQ=255) ggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTg > 2:9355034/1‑151 (MQ=255) gccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGc < 2:669279/151‑1 (MQ=255) cggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGccc > 2:1962907/1‑151 (MQ=255) ggAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcag > 2:703175/1‑151 (MQ=255) gAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagc > 2:1786773/1‑151 (MQ=255) anTCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagca > 1:8773755/1‑151 (MQ=255) aTCGCCCCGCCGTGGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagcag < 2:1666969/151‑1 (MQ=255) cGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGcc < 1:7964145/151‑1 (MQ=255) ccccGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGa < 2:7232933/151‑1 (MQ=255) ccccGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGa < 1:3673213/151‑1 (MQ=255) ccgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATc < 1:7071429/151‑1 (MQ=255) cgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCg < 1:6981118/151‑1 (MQ=255) cgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCg < 1:2908076/151‑1 (MQ=255) cgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCg > 2:6278403/1‑151 (MQ=255) ccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCa > 2:9895038/1‑151 (MQ=255) ccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCa > 2:7446282/1‑151 (MQ=255) ccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCGTCGCGCGGCTTGCCCAGCAGCCGATCGCa > 1:8963427/1‑151 (MQ=255) cgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaa > 1:9219920/1‑151 (MQ=255) gttgttTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaaa > 1:5366760/1‑151 (MQ=255) cgcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACTACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGATTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCa < 1:1310398/151‑1 (MQ=255) gcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCACACGACTGCCAg > 1:5219445/1‑151 (MQ=255) gcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAg > 1:2323888/1‑151 (MQ=255) ccGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAgg < 1:2472624/151‑1 (MQ=255) ttGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGAcc < 1:4004853/151‑1 (MQ=255) ttGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGATCTTGAAAACGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGAcc < 1:8579104/151‑1 (MQ=255) gggACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAg < 2:5198989/151‑1 (MQ=255) ggACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgc < 2:3391343/151‑1 (MQ=255) gACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgcg > 2:5718677/1‑151 (MQ=255) gACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgcg < 1:7583377/151‑1 (MQ=255) cgccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCa > 2:3711666/1‑151 (MQ=255) cgccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCa > 2:9103916/1‑151 (MQ=255) cgccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCa < 1:5782798/151‑1 (MQ=255) gccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTGCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCaa > 2:8671309/1‑151 (MQ=255) ccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAAt < 2:10708429/151‑1 (MQ=255) cgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCACACGACTGCCAGGACCAGCGCACTg > 2:9829130/1‑151 (MQ=255) gcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATgg > 1:8294291/1‑151 (MQ=255) cgccgcGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATa < 1:649221/151‑1 (MQ=255) gccgcGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATAc < 2:4236053/151‑1 (MQ=255) cgcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCg > 2:3075816/1‑151 (MQ=255) gcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCgg < 2:8219465/151‑1 (MQ=255) gcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCgg < 2:10103430/151‑1 (MQ=255) gcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCgg > 2:2170962/1‑151 (MQ=255) gcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCgg > 1:6770152/1‑151 (MQ=255) ggCCAGGACCCGACGTACGACGGCTCACCAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgca < 2:10501116/151‑1 (MQ=255) ggCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgca > 2:9702894/1‑151 (MQ=255) ccAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgcagc < 1:7679238/151‑1 (MQ=255) ccAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgcagc < 2:9286846/151‑1 (MQ=255) aGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGcagcag > 2:2757138/1‑151 (MQ=255) tgACACGACTTTCGTCGGCACATGAAAATGGCCGCCGGGAGGCGGCCTTCCT‑GGGGTTAGCCTGACGTCTCCGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCagcagc < 1:3028838/150‑1 (MQ=255) ggACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCTGCAGCCGATCGCAATCGACTGCCAGGACCAGCGCAATGGATACCGGCagcagc < 2:1036712/151‑1 (MQ=255) ggACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCagcagc > 2:5885488/1‑151 (MQ=255) gACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagcc < 1:7902424/151‑1 (MQ=255) ttCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGc > 1:4572078/1‑151 (MQ=255) gtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTACGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGctct < 1:10263006/151‑1 (MQ=255) tcgGCTCATGAAAAAGGCCGCCCTGTGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTg < 2:4621856/151‑1 (MQ=255) cgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGa < 2:5496731/151‑1 (MQ=255) cgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGa > 2:3969670/1‑151 (MQ=255) ggCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGAt > 2:9605510/1‑151 (MQ=255) cATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGc > 2:4464691/1‑151 (MQ=255) cATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGc < 2:69418/151‑1 (MQ=255) tGAAAATGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGa > 2:10618026/1‑151 (MQ=255) tGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGa > 2:4427812/1‑151 (MQ=255) tGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGa > 1:10584485/1‑151 (MQ=255) aaaaaGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGc > 2:6105715/1‑151 (MQ=255) aaGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCggg > 2:4300535/1‑151 (MQ=255) aGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGa > 2:1107273/1‑151 (MQ=255) gccgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGc < 1:7403470/151‑1 (MQ=255) cGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCg > 1:11195913/1‑151 (MQ=255) ggAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGa > 1:417301/1‑151 (MQ=255) ggcggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGa < 1:2139872/151‑1 (MQ=255) gcggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGAc < 2:11297515/151‑1 (MQ=255) ggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGCTACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGt > 2:2345532/1‑151 (MQ=255) ggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGt < 1:3352443/151‑1 (MQ=255) ggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGt > 1:1451882/1‑151 (MQ=255) ccTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTcc > 1:10333637/1‑151 (MQ=255) cTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCg > 1:2022445/1‑151 (MQ=255) cTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTGGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCg < 2:10835439/151‑1 (MQ=255) | AAATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCG > NC_008463/3909483‑3909778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |