| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,315,218 | Δ1 bp | coding (325/330 nt) | PA14_RS31685 → | FimD/PapC N‑terminal domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,315,216 | 0 | C | . | 99.8% | 2542.6 / ‑1.9 | 515 | coding (323/330 nt) | PA14_RS31685 | FimD/PapC N‑terminal domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (253/260); total (254/261) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 536 total aligned reads displayed.
CCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAC > NC_008463/5315067‑5315362 | ccAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcc > 1:9630455/1‑151 (MQ=255) aGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcctc < 1:10079367/151‑3 (MQ=255) tGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGa > 1:5789248/1‑151 (MQ=255) gACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAgg < 1:827824/151‑1 (MQ=255) ccccGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGcc > 1:3984407/1‑151 (MQ=255) cccGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCg > 1:176243/1‑151 (MQ=255) cccGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCg > 1:1571366/1‑151 (MQ=255) ccGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCgg > 1:5491411/1‑151 (MQ=255) cGGAACCAAACATGTCGATGTCTATCTCAACGGCAGCTAAGCCAGTCGAACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCACG‑CCTCTGAGTCCGGc > 2:1025803/1‑151 (MQ=255) ggAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCg > 1:4793718/1‑151 (MQ=255) caCCTACCCTGCCGCGGTCGATCTCAACGGCAGCAACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGTCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTg < 2:3083190/150‑1 (MQ=255) aaCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTg < 2:9613187/151‑1 (MQ=255) aCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGc > 2:2590237/1‑151 (MQ=255) cTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCaa > 1:7415582/1‑151 (MQ=255) aCCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCGGAGGCCGGCGTGCAAgc > 2:10751858/1‑151 (MQ=255) ccATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgcg < 1:2318138/151‑1 (MQ=255) cATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgcgc > 2:1382223/1‑151 (MQ=255) aTGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGcc > 2:729257/1‑151 (MQ=255) tCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTgg < 2:7966156/151‑1 (MQ=255) cGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGga < 2:2945387/151‑1 (MQ=255) gATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgag > 1:4409038/1‑151 (MQ=255) gATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgag > 1:8957039/1‑151 (MQ=255) gATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgag < 2:2649489/151‑1 (MQ=255) tCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTg > 1:11101650/1‑151 (MQ=255) tCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTg < 2:7771328/151‑1 (MQ=255) tATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc > 1:2836430/1‑151 (MQ=255) aTCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCt > 1:9978102/1‑151 (MQ=255) tctcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCGTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTg < 2:1840734/151‑1 (MQ=255) ctcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgg < 2:1554090/151‑1 (MQ=255) ctcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgg < 2:5376204/151‑1 (MQ=255) ctcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgg < 1:7472515/151‑1 (MQ=255) tcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCACGCGCCTGGAGATTGCCTggg > 2:3964179/1‑151 (MQ=255) aaCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGc > 2:854839/1‑151 (MQ=255) ggCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTgg < 2:110542/151‑1 (MQ=255) aGCTACGCCAGTCGCTCCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCGGAGGCCGGCGTGCACGCGCCGGGAGAGTGCCTGGGGCTGgaag > 2:4486082/1‑151 (MQ=255) aCGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACg > 1:5942211/1‑151 (MQ=255) gCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGcc > 1:10930840/1‑151 (MQ=255) gCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGcc < 1:3379466/151‑1 (MQ=255) aGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc < 1:7107037/151‑1 (MQ=255) gTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGcc < 2:967685/151‑1 (MQ=255) gTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGcc < 2:6490082/151‑1 (MQ=255) tCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCa < 1:5683123/151‑1 (MQ=255) tCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCa < 2:9444293/151‑1 (MQ=255) cGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAg < 1:9176037/151‑1 (MQ=255) cACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGc > 1:6617451/1‑151 (MQ=255) aCCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTAGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGTGCTGGAAGAACGCCTGCCAGGCt > 2:11447602/1‑151 (MQ=255) cAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCg > 2:232828/1‑151 (MQ=255) aTCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt > 1:8637289/1‑151 (MQ=255) aTCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt < 1:2979416/151‑1 (MQ=255) gtCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtc < 2:1623421/150‑1 (MQ=255) ccGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtctc < 2:6206682/151‑1 (MQ=255) gCCCCCCGGCCCGCGGCCTCAAAACCAGCATAGGCGAACCCGTCTTTCGCCCGACCCGGGGCGTCCGCCCCG‑CCACTGAGGCCCGCGTGCAAGCGCCTGGAGATATCCGGGGGCGGGAAGAACGCCAGCCAGGCTAGACCTACAAACTCGa > 1:1997121/1‑151 (MQ=255) ccccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCACGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGaca > 2:5825168/1‑151 (MQ=255) ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACAcc > 2:4331975/1‑151 (MQ=255) cGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGAAAGCGCCTGGAGATTGCCTGGGGCGGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCg > 2:8658929/1‑151 (MQ=255) gggCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGc < 2:7187699/151‑1 (MQ=255) ggCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGcc < 2:6908484/151‑1 (MQ=255) gCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGccc < 2:9502622/151‑1 (MQ=255) ccGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCt < 2:2227975/151‑1 (MQ=255) gcggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCt < 2:4171317/151‑1 (MQ=255) cggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTg > 1:2586818/1‑151 (MQ=255) cggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTg < 1:10283743/151‑1 (MQ=255) gcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcg < 2:10652488/151‑1 (MQ=255) cgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcgc > 1:7251104/1‑151 (MQ=255) cgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcgc > 1:11396287/1‑151 (MQ=255) cAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTc < 2:1044724/151‑1 (MQ=255) aaaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg > 1:3541170/1‑151 (MQ=255) aCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAt > 1:1648318/1‑151 (MQ=255) tGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctct < 2:8180805/151‑1 (MQ=255) tGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctct > 1:10454402/1‑151 (MQ=255) tGCTTCGGCGAACGCTTCGTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGTTTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTGCCTTCTCGTCACCGCCCTTCTGCGCCTCGAtctct > 2:6652068/1‑151 (MQ=255) ggCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGc > 1:3801837/1‑151 (MQ=255) gCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGcc > 1:7887863/1‑151 (MQ=255) aaCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa < 1:4650196/151‑1 (MQ=255) aCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAg > 2:7653267/1‑151 (MQ=255) aCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAg > 2:5550277/1‑151 (MQ=255) cGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAgg > 1:4994110/1‑151 (MQ=255) cGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAgg > 1:936001/1‑151 (MQ=255) cGCTTCGTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAgg < 1:6843406/151‑1 (MQ=255) cttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCTATCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCATTCTGCGCCTCGATCTCTCGGTGCCCCAGGcc < 2:7522631/151‑1 (MQ=255) cttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGcc > 2:3206450/1‑151 (MQ=255) ttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGccc > 2:9201798/1‑151 (MQ=255) ttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGccc > 1:617506/1‑151 (MQ=255) gtGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCctgc < 2:11379081/150‑1 (MQ=255) ccGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGat > 1:1447996/1‑151 (MQ=255) ccGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCGGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTGCAATCTCGACACCGCCCGTCTGCGCCTCGAGCTCGCGGTGCCCCGGGCCCTGCGGGat > 2:2777838/1‑151 (MQ=255) cGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata > 2:3403044/1‑151 (MQ=255) cGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata > 2:3828154/1‑151 (MQ=255) gACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATc < 1:4287580/151‑1 (MQ=255) aCGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCa < 1:8048312/151‑1 (MQ=255) aCGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCa < 1:10026006/151‑1 (MQ=255) cGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCaa < 1:8683573/151‑1 (MQ=255) gCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAg < 2:9000994/151‑1 (MQ=255) tGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc < 2:11201232/151‑1 (MQ=255) gggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCa < 1:7749716/151‑1 (MQ=255) gCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCAcg < 1:5316525/151‑1 (MQ=255) gTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCAcgcg > 2:9784828/1‑151 (MQ=255) ccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAc > 1:6325849/1‑151 (MQ=255) ccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAc < 1:11317538/151‑1 (MQ=255) ccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAc < 2:5020559/151‑1 (MQ=255) | CCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAC > NC_008463/5315067‑5315362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |