| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,395,470 | Δ1 bp | intergenic (‑103/+50) | PA14_RS24730 ← / ← PA14_RS24735 | hypothetical protein/ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,395,467 | 0 | G | . | 96.3% | 1551.5 / 63.9 | 371 | intergenic (‑100/+53) | PA14_RS24730/PA14_RS24735 | hypothetical protein/ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/10); major base . (177/164); minor base T (1/12); total (178/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.46e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 388 total aligned reads displayed.
CGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAGT > NC_008463/5395318‑5395613 | cgcgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgg > 2:5572142/1‑151 (MQ=255) cgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggc < 1:10120826/151‑2 (MQ=255) tGGTCAGCCCCAGACAAGTGCTGATGAGGCAGAGGTGACGCGGCTTGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATATCTCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcgg < 2:6800880/151‑4 (MQ=255) tGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcgg > 1:3964306/1‑148 (MQ=255) tGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcgg < 2:2867214/151‑4 (MQ=255) gTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCgggg < 1:4546226/151‑1 (MQ=255) cAGCCCCAGACTAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggct < 2:4543194/151‑3 (MQ=255) aGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGACCTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggctt > 1:10453123/1‑148 (MQ=255) ccccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTc < 2:4075107/151‑1 (MQ=255) aGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGc < 1:7644213/151‑1 (MQ=255) aCAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGccc > 1:8917724/1‑151 (MQ=255) ctaGGGCGGATGAGGCAGAGGTTACTCGGCATGTCGGCATCCTCACGGGGGTTCCCAGTTTTGAGGCTACACCTGCGGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACATGGCTGAATCGCACGA‑GGGC‑GGGGCTTTCCAGcccc < 2:1806469/149‑1 (MQ=255) aaGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCg < 1:10705676/151‑1 (MQ=255) aGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGc > 2:3560163/1‑151 (MQ=255) gggCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGGTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGcc > 1:1729965/1‑151 (MQ=255) cGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTc > 1:6094866/1‑151 (MQ=255) cGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTc < 1:572083/151‑1 (MQ=255) gATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCgg < 2:650124/151‑1 (MQ=255) tGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCa < 2:1999062/151‑1 (MQ=255) gAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAg > 2:9752235/1‑151 (MQ=255) gAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAg > 1:2491619/1‑151 (MQ=255) gCAGTGGTTACGCGGAAGGGCGGCATCCTCCCGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCTGGTTCCGAATAGCGCCGGGGGGAATTTGTCCACTGGGCTGAAACGCCCGCGGG‑‑GGGGGCTTTCCTGCCCCGCCCTCGGCAGGtt < 1:7153747/151‑1 (MQ=255) cAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTc > 2:1362968/1‑151 (MQ=255) agagGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTcc > 1:8610538/1‑151 (MQ=255) agagGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTcc > 1:3157970/1‑151 (MQ=255) gagGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCg > 1:1817688/1‑151 (MQ=255) agGTTCCGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGAATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCgg < 1:5613962/151‑1 (MQ=255) agGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCgg > 2:10133630/1‑151 (MQ=255) ggTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGc > 1:9491008/1‑151 (MQ=255) gTTACGCGGCTTGGGGGCAACCACACGGGGTTTCCCTTTTTGGAGCATACACCTCCCGCCCGGTTCCGCATCGCGCCGGCGGGACCTGGGCCACAGGGCTGAAACGCCCG‑TGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCa < 1:3259827/151‑1 (MQ=255) tACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAAc > 1:6175065/1‑151 (MQ=255) cgGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACgcgc < 2:661003/151‑1 (MQ=255) gcggcATCCTCCCGGGGGTTCCCAGTTTTGAGCCTCCCCCTGCCGCCCGGTACCGCATACCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACG‑TGGGC‑GGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTc < 1:9995411/151‑1 (MQ=255) ggcATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAg > 2:7501444/1‑151 (MQ=255) ggcATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACACAg > 1:3043689/1‑151 (MQ=255) ggcATCCTCACGGGGGTTCCCAGTGTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAg > 2:5493303/1‑151 (MQ=255) tCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCct > 2:9611243/1‑151 (MQ=255) ccTCACGGGGTTTCCCATTTTTGAGCCTACCCCTGCCGCCCGGTTCCGCATAGCGCCGGCGGGAACTGGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCctt < 2:1210279/151‑1 (MQ=255) ccTCACGGGGGGTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCctt > 2:901443/1‑151 (MQ=255) cTCAGGGGGGTTCCCTGTTTTGAGCATACACCTGCCGCCTGGTTCCGCATAGCGCCGGCGGTAACTTGTCCACAGGGCTGAAACGCACG‑TGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttc < 1:1481189/151‑1 (MQ=255) cTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttc > 2:11073187/1‑151 (MQ=255) cGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcg > 2:1277310/1‑151 (MQ=255) cGGGGGTTCCCAGTTTAGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGACCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCCACGCGCCGGACTCAGTCCTGCTTcg > 2:6993146/1‑151 (MQ=255) gggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccg > 1:7425276/1‑151 (MQ=255) tCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGc > 2:8909885/1‑151 (MQ=255) tCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGc > 2:9487366/1‑151 (MQ=255) cccAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCTTAGGGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGcc < 2:3032317/151‑1 (MQ=255) ccAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTGTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGCCTCAGTCGTTCTTCGCCGCGGCCt > 2:5820925/1‑151 (MQ=255) tttgccccTACACCTGCCGCCAGGTTCCGAATAGCGCCGGCGGTAACTTGTCCACCGGGCTGAAACCCACGA‑GGGC‑GGGGCTTTCCACCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTcc < 1:6771995/145‑1 (MQ=255) ttGAGCCTACACCTGCCGCCTGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCt < 2:5258496/151‑1 (MQ=255) tGAGCCAACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCtt < 1:921607/151‑1 (MQ=255) gAGCCTACACCTGCCGCCAGTTTCCGCATCGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCCCGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTc < 2:4869449/151‑1 (MQ=255) gAGCCAACACCTGCCGCCTGGTTCCGCATCGCGCCGGCGGTAACTGGTCCACCGGGCTGAAACGCACGTGGG‑‑GGGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTc < 1:2040817/151‑1 (MQ=255) aGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTTAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcg < 1:8279810/151‑1 (MQ=255) gCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgc > 2:3772510/1‑151 (MQ=255) ccTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgcc > 1:10811969/1‑151 (MQ=255) cTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACG‑TGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgccg < 2:4744167/151‑1 (MQ=255) acacCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCcgcg > 1:780938/1‑151 (MQ=255) acCTGCCGCCTGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGAc < 2:6752827/151‑1 (MQ=255) acCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGAc > 2:7916443/1‑151 (MQ=255) acCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGAc > 1:6486997/1‑151 (MQ=255) tGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCACCGCGCCGGACTCAGGCCTTCGTCGCCGCGGCGGTGTCCTTCGGGGCGTCGGt > 2:10618357/1‑151 (MQ=255) ccgccAGGTTCCGCATCGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtct < 2:718573/151‑1 (MQ=255) ccgccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtct < 2:4649585/151‑1 (MQ=255) gccTGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTctct < 2:10408049/151‑1 (MQ=255) gccAGGTTCCGCTTAGCGCGGGCGGGAACTTGTCCACAGGGCTGAACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTctct < 2:5146411/151‑1 (MQ=255) ccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCtt < 2:8520757/151‑1 (MQ=255) cAGGTTCCGCATCGCGCCGGCGGGAACTTGTCCACAGGGCTGAACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCttt < 1:3214033/151‑1 (MQ=255) ggTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtct < 2:1612036/151‑1 (MQ=255) tCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccg < 1:2736534/151‑1 (MQ=255) tCCGCATAGCGCCGGCGGGAACTTGACCACAGGGCTGAAACGCACGA‑GGGC‑GGGGATTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccg < 1:4146266/151‑1 (MQ=255) cGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgcc > 1:11204974/1‑151 (MQ=255) cGCAGAGCGCCGGCGGGACCTTGTCCACAGGGCTGCAACGCACG‑CGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCACCGCGCCGGACTCCGTCCATCTTCGCCGCGGCATGGTCCTTCGCCGCGACGGTCTCTTTCTccgcc < 2:2154165/151‑1 (MQ=255) gCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgccg < 2:3903759/151‑1 (MQ=255) gCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTGTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgccg > 2:5433025/1‑151 (MQ=255) cATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCgg > 2:11252177/1‑151 (MQ=255) cATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCgg < 2:11442632/151‑1 (MQ=255) aTAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCGTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGc > 2:4404360/1‑151 (MQ=255) tAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCt > 2:10873205/1‑151 (MQ=255) aGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCtt < 1:7366507/151‑1 (MQ=255) aGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCGTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTGTCTCCGCCGGCtt > 2:8423550/1‑151 (MQ=255) cggcggGAACTTGTCCACAGGGCTGAAACGCACGAGGG‑‑GGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCt < 1:10190265/151‑1 (MQ=255) ggcggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtt > 1:10016948/1‑151 (MQ=255) gcggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCttt < 2:5364139/151‑1 (MQ=255) gcggGAACGTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCttt < 2:5982343/151‑1 (MQ=255) cggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTGTCTCCGCCGGCTTGTCCtttt > 1:2365473/1‑151 (MQ=255) gAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCt > 1:4907924/1‑151 (MQ=255) aaCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCtt > 1:7966629/1‑151 (MQ=255) aCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTg < 1:8458028/151‑1 (MQ=255) ttGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtc < 2:2516735/151‑1 (MQ=255) ccACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTcc < 2:3541701/151‑1 (MQ=255) cacaGGGCTGAAACGCCCGA‑GGGC‑GGGGCTGTCCAGCCCCCCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCct < 1:4228389/151‑1 (MQ=255) cacaGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCct < 2:7800958/151‑1 (MQ=255) cacaGGGCTGAAACGCACG‑CGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCct < 1:5333172/151‑1 (MQ=255) gggCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCGTGTCGTccgcgtc > 2:9303601/1‑146 (MQ=255) gAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGc < 1:6663066/151‑1 (MQ=255) aaaCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGcc > 2:4255619/1‑151 (MQ=255) aaCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCg > 1:2999767/1‑151 (MQ=255) aaCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCATTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCg < 2:6233874/151‑1 (MQ=255) aCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCgt > 2:7364958/1‑150 (MQ=255) | CGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAGT > NC_008463/5395318‑5395613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |