| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 6,250,873 | Δ1 bp | intergenic (+16/‑163) | dadR → / → PA14_RS28560 | transcriptional regulator DadR/FAD‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 6,250,871 | 0 | C | . | 98.9% | 2171.5 / 24.9 | 456 | intergenic (+14/‑165) | dadR/PA14_RS28560 | transcriptional regulator DadR/FAD‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (1/4); new base . (215/231); total (219/237) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 471 total aligned reads displayed.
CTCGCATCTCGGAAATGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCTCCCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAATTTTCCACACATA > NC_008463/6250721‑6251017 | gCATCTCGGAAATGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCTccgg > 2:10740763/1‑149 (MQ=255) aTCTCGGAAATGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGTCCTACCGGGTCCGGATTGACCCATGACGCGCTCCggga > 2:11340505/1‑150 (MQ=255) aTCTCGGAAATGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCTCCggga < 1:9909677/151‑2 (MQ=255) tctcGGAAATGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAg < 1:5534860/151‑1 (MQ=255) ctcGGAAATGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGt < 1:9259178/151‑1 (MQ=255) aaTGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCa > 1:7314661/1‑151 (MQ=255) gCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGAc < 2:2625763/151‑1 (MQ=255) gTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTc > 1:225032/1‑151 (MQ=255) gCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATa < 2:7948895/151‑1 (MQ=255) aaGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGa > 2:10568937/1‑151 (MQ=255) gctgctCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACg < 2:11052516/151‑1 (MQ=255) tgctCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGTCggg < 1:7786548/151‑1 (MQ=255) ctCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGaa < 2:11457774/151‑1 (MQ=255) ggCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGCGTCCGCCAGGACTCCCGGCATAGACGGGAcaca > 2:6301643/1‑151 (MQ=255) ggCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAaca < 1:10159466/151‑1 (MQ=255) cGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACAcc > 2:431418/1‑151 (MQ=255) gACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCg < 1:7072316/151‑1 (MQ=255) ccTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCttt > 1:9078388/1‑151 (MQ=255) ctgctgAAACTGCCGCACCTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGTTCAAGGAGTCGCTCGACCAACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACACCCGGCAAAGACGGGCAACACCGACttgt > 2:5560421/1‑149 (MQ=255) ctgcagAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCtttt < 2:6965432/151‑1 (MQ=255) tgctgAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTc < 1:10611207/151‑1 (MQ=255) gctgACACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCt < 1:5029951/151‑1 (MQ=255) gctgAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCt < 2:3842219/151‑1 (MQ=255) ctgAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTg < 2:1017461/151‑1 (MQ=255) tgAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGt > 1:3258094/1‑151 (MQ=255) tgAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGt < 1:2889681/151‑1 (MQ=255) gAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTa > 1:4554965/1‑151 (MQ=255) gAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTa > 2:4747792/1‑151 (MQ=255) aaaCTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTac < 1:598293/151‑1 (MQ=255) aaCTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTaca < 1:5325442/151‑1 (MQ=255) aaCTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTaca < 1:5712692/151‑1 (MQ=255) gCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGAt > 2:2681996/1‑151 (MQ=255) cGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATcc > 2:4596729/1‑151 (MQ=255) gCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATccc > 2:7513293/1‑151 (MQ=255) cACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATcccc < 1:8935094/151‑1 (MQ=255) gTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCa < 1:2525629/151‑1 (MQ=255) tACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCaa > 2:644360/1‑151 (MQ=255) tACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCaa > 1:7389537/1‑151 (MQ=255) cgcgAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAaca > 2:2092292/1‑151 (MQ=255) cgcgAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAaca > 1:8430192/1‑151 (MQ=255) gAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCt > 1:2652893/1‑151 (MQ=255) aGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTc > 2:8572891/1‑151 (MQ=255) aGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTc < 1:11411688/151‑1 (MQ=255) aGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTc < 1:8085703/151‑1 (MQ=255) gTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCg < 1:10882083/151‑1 (MQ=255) cGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGC‑ACCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCa > 1:6542122/1‑151 (MQ=255) gAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCCTAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAg > 2:9737726/1‑151 (MQ=255) gAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAg > 1:66736/1‑151 (MQ=255) gAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAg > 2:3504650/1‑151 (MQ=255) aaGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCTGTTCCTTATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGt < 2:318131/151‑1 (MQ=255) agagCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACTCCTCGCAGtt < 1:4876664/151‑1 (MQ=255) gagCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGttt < 2:3753390/151‑1 (MQ=255) cTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCAACAGGTTCCGGATTTAACCCTGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATATACGGGAAACACCGTCTTTTCTGTAAACGATACCCGCAACAACTCGCAGtttttt > 1:3808904/1‑151 (MQ=255) atatCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTcc < 1:768992/151‑1 (MQ=255) atCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTACtt > 1:8699431/1‑151 (MQ=255) cGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCtttt > 2:5452678/1‑151 (MQ=255) tCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTc < 2:2817060/151‑1 (MQ=255) tGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGcc > 2:4120143/1‑151 (MQ=255) tGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCACGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTGTTCGcc < 2:2987036/151‑1 (MQ=255) ggAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGccc > 1:6253539/1‑151 (MQ=255) ggAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGccc < 1:682180/151‑1 (MQ=255) gAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCt > 1:10016377/1‑151 (MQ=255) agagGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTg < 1:11112042/151‑1 (MQ=255) agGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGc < 1:4722595/151‑1 (MQ=255) ggTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCg > 2:9137890/1‑151 (MQ=255) tCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAg < 1:1877546/151‑1 (MQ=255) cAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGACTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTACCTTTTTCGCCCTTGGCGAgc < 2:6857255/151‑1 (MQ=255) aaGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAgcg > 1:2058012/1‑151 (MQ=255) ggAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGcc < 2:7302391/151‑1 (MQ=255) aGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTc > 1:3471611/1‑151 (MQ=255) aGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTc > 1:7163999/1‑151 (MQ=255) gTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGATACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCg < 2:2315081/151‑1 (MQ=255) tCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGa > 1:8881229/1‑151 (MQ=255) cGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGAc < 2:569157/151‑1 (MQ=255) gCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACt > 1:3342534/1‑151 (MQ=255) cTCGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTg > 1:9627083/1‑151 (MQ=255) cGACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTGTTCTGTACACGATCCCCGCAACACCTCGCAGTATTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGAc > 2:8850240/1‑151 (MQ=255) gACCTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACg > 1:9981277/1‑151 (MQ=255) cTACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGttt < 2:4492487/151‑1 (MQ=255) tACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTa < 1:8376716/151‑1 (MQ=255) tACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTa > 2:8384858/1‑151 (MQ=255) tACCGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTa < 1:1491459/151‑1 (MQ=255) ccGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATg > 1:10784156/1‑151 (MQ=255) cGGTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGc < 2:649699/151‑1 (MQ=255) ggTTCCGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCt < 2:5039623/151‑1 (MQ=255) ccGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGt < 1:2438544/151‑1 (MQ=255) cGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTc < 1:2975698/151‑1 (MQ=255) cGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTc < 2:6142067/151‑1 (MQ=255) cGGATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCAGAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTc < 2:1540960/151‑1 (MQ=255) ggATTGACCCATGCCGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCa > 2:334757/1‑151 (MQ=255) ggATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCa < 1:435586/151‑1 (MQ=255) ggATTGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCa < 2:5272878/151‑1 (MQ=255) ttGACCCATGACGCTCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAAt < 2:8983250/151‑1 (MQ=255) ttGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAAt < 2:1115674/151‑1 (MQ=255) ttGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAAt < 2:9460762/151‑1 (MQ=255) tGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAAtt < 1:3699673/151‑1 (MQ=255) tGACCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAAtt < 1:11288431/151‑1 (MQ=255) aCCCATGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATCGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAAtttt < 1:134456/151‑1 (MQ=255) tGACGCGCT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAATTTTCcaca < 1:11220020/151‑1 (MQ=255) gcgcT‑CCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGAGCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAATTTTCCACCCata < 2:2035844/151‑1 (MQ=255) | CTCGCATCTCGGAAATGGCGTCCTACCGCAAGCTGCTCGGCGACATCCTGCTGAAACTGCCGCACGTACGCGAGTCGAAGAGCTATATCGTCATGGAAGAGGTCAAGGAGTCGCTCGACCTACCGGTTCCGGATTGACCCATGACGCGCTCCCGGGAGTCCGCCAGGACTCCCGGCATAGACGGGAAACACCGTCTTTTCTGTACACGATCCCCGCAACACCTCGCAGTTTTTTCCTTTTTCGCCCTTGGCGAGCGCCTCGACTGACGTTTATGCTCCGTCAAATTTTCCACACATA > NC_008463/6250721‑6251017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |