| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 559,051 | +T | intergenic (+619/+70) | PA14_RS02545 → / ← rarD | glycine cleavage system protein R/EamA family transporter RarD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 559,050 | 1 | . | T | 97.2% | 1295.8 / 4.2 | 319 | intergenic (+618/+71) | PA14_RS02545/rarD | glycine cleavage system protein R/EamA family transporter RarD |
| Reads supporting (aligned to +/- strand): ref base . (3/0); major base T (156/151); minor base G (7/2); total (166/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 345 total aligned reads displayed.
ACAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑TGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGATGAA > NC_008463/558900‑559195 | aCAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑a > 1:9244705/1‑151 (MQ=255) cAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCCCGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑t < 2:9318923/151‑1 (MQ=255) cAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑t > 1:1678797/1‑151 (MQ=255) aGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑tt > 1:10035612/1‑150 (MQ=255) aGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑tt < 2:7007389/151‑2 (MQ=255) cGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑ttgg < 1:3700731/151‑4 (MQ=255) ggTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑ttggc > 1:11121495/1‑147 (MQ=255) gtgtGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑ttggcg < 2:1420958/151‑6 (MQ=255) tgtgCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCgg < 2:9952075/151‑1 (MQ=255) gtgCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCggg < 1:9786701/151‑1 (MQ=255) gtgCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCggg < 2:37246/151‑1 (MQ=255) cTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGa > 1:6512483/1‑151 (MQ=255) tCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGAt < 2:8783294/151‑1 (MQ=255) aaGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATagg > 1:5831010/1‑151 (MQ=255) aGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATagga < 1:1299528/151‑1 (MQ=255) gACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATaggaa > 1:2519218/1‑151 (MQ=255) aCTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGCTaggaag > 1:846885/1‑151 (MQ=255) tGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATaggaagga < 2:3557294/151‑1 (MQ=255) tGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATaggaagga < 1:614071/151‑1 (MQ=255) gATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAg > 1:8344543/1‑151 (MQ=255) gATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAg < 1:8998682/151‑1 (MQ=255) aTCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGt > 1:11157734/1‑151 (MQ=255) cAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGc < 2:7147259/151‑1 (MQ=255) gcTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGtt < 1:5116766/151‑1 (MQ=255) gcTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCGGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGtt > 2:3824254/1‑151 (MQ=255) tttGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGtttt < 2:8937967/151‑1 (MQ=255) gggCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGcc < 1:687949/151‑1 (MQ=255) gCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAg < 2:2998429/151‑1 (MQ=255) cttcttCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCAAGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAgg < 2:1676625/151‑1 (MQ=255) ttcttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGc > 2:593503/1‑151 (MQ=255) tcttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCt > 1:4628046/1‑151 (MQ=255) tcttcCGACGAGTGATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGACAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCt < 2:10183379/151‑1 (MQ=255) cttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCtt < 1:1753599/151‑1 (MQ=255) tcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGc < 1:8591170/151‑1 (MQ=255) ccGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCg < 1:5523227/151‑1 (MQ=255) gacgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGa > 1:5001492/1‑151 (MQ=255) cgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGt < 1:8123826/151‑1 (MQ=255) tATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGc > 2:4571452/1‑151 (MQ=255) tATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGc < 1:6264461/151‑1 (MQ=255) aTCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCa > 2:10512224/1‑151 (MQ=255) ccACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAg < 1:7333582/151‑1 (MQ=255) ccACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAg < 2:10957057/151‑1 (MQ=255) aCGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGcc > 1:1075235/1‑151 (MQ=255) gCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATa < 1:10203951/151‑1 (MQ=255) cGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAACAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATaa < 1:2682896/151‑1 (MQ=255) gggAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACg > 2:9507330/1‑151 (MQ=255) gaggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTc > 1:7825987/1‑151 (MQ=255) aggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCa < 2:4158443/151‑1 (MQ=255) aggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCa < 2:2697000/151‑1 (MQ=255) aggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCa < 2:10084841/151‑1 (MQ=255) ggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAg > 2:3067634/1‑151 (MQ=255) gagaAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGc > 1:3239252/1‑151 (MQ=255) gagaAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGACAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCGGGGGATAACGTCAGc > 1:945525/1‑151 (MQ=255) gaAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGccc > 2:4902606/1‑151 (MQ=255) ggCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGc > 1:4006396/1‑151 (MQ=255) gCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCt > 2:5197488/1‑151 (MQ=255) gCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCt < 1:10490639/151‑1 (MQ=255) cAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTg > 2:8512580/1‑151 (MQ=255) cAGGTCTATGCACAAAGTACGTGCAAGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTg < 2:7475058/151‑1 (MQ=255) aTGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAgg > 2:2573461/1‑151 (MQ=255) gCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTACGCAAGCCTGGGGATAACGTAAGGCCGGGTGGGGAAggcg > 2:8675204/1‑151 (MQ=255) cacaAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAggcgg > 2:6164152/1‑151 (MQ=255) acaAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAggcggc < 1:4454091/151‑1 (MQ=255) aaaGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGgcgc > 1:1915388/1‑151 (MQ=255) aaGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTGTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCGGGGGAAGGCGGCGCa > 2:2008176/1‑151 (MQ=255) aCGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTATTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCt < 2:2880766/151‑1 (MQ=255) gTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTgc > 1:2960127/1‑151 (MQ=255) tGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTgcg > 2:3612702/1‑151 (MQ=255) aTGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCa > 2:3367512/1‑151 (MQ=255) gAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAgg > 2:4562054/1‑151 (MQ=255) aaCCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGc > 1:6982261/1‑151 (MQ=255) aCCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCg > 1:1479641/1‑151 (MQ=255) cTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTc > 2:572912/1‑151 (MQ=255) tgtgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCg > 2:4345087/1‑151 (MQ=255) gtgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGa > 2:10694274/1‑151 (MQ=255) gtgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGa > 2:11071401/1‑151 (MQ=255) tgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGaa > 1:8931626/1‑151 (MQ=255) ggAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAg > 2:684596/1‑151 (MQ=255) gAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGc < 1:2244166/151‑1 (MQ=255) gAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCGGGGGACGGCGGCGCAGGCTGCGGCAGGCGTCGAAGc > 1:9656395/1‑151 (MQ=255) gAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGGGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCCGCCCGGCTGGGGACGGCGGCGCAGGCTGCGCCAGGCGTCGAAGc > 2:7605117/1‑151 (MQ=255) gAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑AGTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGc < 2:468004/151‑1 (MQ=255) cacaGCCAGGGGGGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGAAAGGAACGAGTGCGTGTTTTCTCGCCAGGCTTGCGGCGGTCCGCAAGCCTGGGGAGAACGTCAGCCCGGCTGGGGAAGGCGCCGCAGGCTGCGCCAGGCGTCGAAGCt < 2:8018307/148‑1 (MQ=255) aaaGCCTGGGGTGGATCGCTGAGCGTGAGTCT‑TGGCGGGGGATAGGACGGAGTGCGTGTTTGTTCGCCAGGCTTGCGGAGTTCCGCTAGCCTGGGGATAACGTCGGCCCGGGGGGGGACGGCGGCGCAGGCTGGGCCTGGCGTCGAAGCTg > 2:8253101/1‑151 (MQ=255) aaaGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTg > 2:650969/1‑151 (MQ=255) aaGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGt < 1:8214895/151‑1 (MQ=255) aGCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTa > 1:6214840/1‑151 (MQ=255) gCCTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAg < 2:4781303/151‑1 (MQ=255) ccTGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGa > 2:11275484/1‑151 (MQ=255) tGGGGTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACg > 2:10340653/1‑151 (MQ=255) aggggTGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACg < 2:5124756/150‑1 (MQ=255) tGGATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAg < 1:4562184/151‑1 (MQ=255) ggATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAgg < 1:10823520/151‑1 (MQ=255) gATCGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAggg < 2:553141/151‑1 (MQ=255) cGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGa < 1:8070383/151‑1 (MQ=255) cGCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGa < 1:2664684/151‑1 (MQ=255) gCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAg > 2:9078688/1‑151 (MQ=255) gCTGAGCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAg < 1:8665721/151‑1 (MQ=255) gCGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCATGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCTGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTATACGGCCAGGGCGATCCAGa > 1:7601570/1‑151 (MQ=255) cGTCAGT‑ATTGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGAt < 2:9853292/151‑1 (MQ=255) | ACAGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGT‑A‑TGGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGATGAA > NC_008463/558900‑559195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |