New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_008463 3175697 =350 (0.670)501 (1.050) 205/274 0.2 61.8% intergenic (+390/+106) PA14_RS30505/PA14_RS14515 hypothetical protein/hypothetical protein
?NC_008463 = 3177289 301 (0.630)intergenic (‑69/‑218) PA14_RS14525/PA14_RS14530 hypothetical protein/Tn3 family transposase

Only 100 of 668 total aligned reads displayed.

GAGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_008463/3175859‑3175697
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgcataatgCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  NC_008463/3177289‑3177140
                                                                                                                                                                                                                                                                                                                         
GAGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGG                                                                                                                                                                    <  1:3611758/151‑1
 AGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGC                                                                                                                                                                   >  1:2707737/1‑151
  GATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCT                                                                                                                                                                  <  1:8611244/151‑1
  GATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCT                                                                                                                                                                  >  1:9785369/1‑151
  GATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCT                                                                                                                                                                  >  2:889491/1‑151
  GATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCT                                                                                                                                                                  <  2:535775/151‑1
   ATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTT                                                                                                                                                                 >  2:1069814/1‑151
    TGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCCTCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGACTGGAAATGCTTAAGGCTTC                                                                                                                                                                <  1:1609229/151‑1
     ggTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCG                                                                                                                                                               >  1:4282717/3‑151
      TTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGACAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGC                                                                                                                                                              <  2:10563726/151‑1
      TTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGC                                                                                                                                                              >  1:3042435/1‑151
       TCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCA                                                                                                                                                             <  2:647773/151‑1
       TCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCA                                                                                                                                                             <  1:1788959/151‑1
         TGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATA                                                                                                                                                           <  1:2487480/151‑1
            TCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATG                                                                                                                                                        >  1:10052622/1‑151
               GACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTC                                                                                                                                                     >  1:10941914/1‑151
                ACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCG                                                                                                                                                    <  1:6591156/151‑1
                  ATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGC                                                                                                                                                  >  1:8018080/1‑151
                      GTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTA                                                                                                                                              <  2:3376149/151‑1
                       TACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTAT                                                                                                                                             >  2:9755333/1‑151
                        ACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATG                                                                                                                                            <  1:8982319/151‑1
                         CGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGT                                                                                                                                           >  1:2301823/1‑151
                         CGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGT                                                                                                                                           >  1:3811515/1‑151
                          GTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTT                                                                                                                                          <  2:7316175/151‑1
                              CGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGC                                                                                                                                      >  1:628996/1‑151
                               gtGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGACAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCG                                                                                                                                     <  2:4999413/149‑1
                               GGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGATAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGATATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCG                                                                                                                                     >  2:6285438/1‑151
                               GGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCG                                                                                                                                     <  2:10045661/151‑1
                                 GTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCC                                                                                                                                   <  2:3777884/151‑1
                                       AAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGCTCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCGTATGTTGAGCGCCGCCCGG                                                                                                                             >  2:8352275/1‑151
                                         GCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGAC                                                                                                                           <  1:3397568/151‑1
                                                        ACCGATACGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCG                                                                                                            <  2:4369446/151‑1
                                                        ACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAGATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGGTGAGCGCCGCCCGGCCAATACGGCGGCTGCG                                                                                                            >  2:6967020/1‑151
                                                        ACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCG                                                                                                            <  1:10254221/151‑1
                                                        ACCGATAAGGCTACACTGGCTAGACAGAAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCGGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCG                                                                                                            <  2:8034710/151‑1
                                                           GATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGC                                                                                                         >  2:8239799/1‑151
                                                           GATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGC                                                                                                         >  1:557133/1‑151
                                                           GATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGC                                                                                                         >  2:10197111/1‑151
                                                               AGGCTTCACTGGCTAGACAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGACTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCG                                                                                                     <  2:1824743/151‑1
                                                                GGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGC                                                                                                    >  2:9106929/1‑151
                                                                  CTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGT                                                                                                  <  1:5982865/151‑1
                                                                    TCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAAGGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAA                                                                                                <  2:94835/151‑1
                                                                      ACTGGCTAGAAAGCATGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCTTAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACA                                                                                              >  1:4499472/1‑151
                                                                      ACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACA                                                                                              <  1:1988353/151‑1
                                                                         GGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAG                                                                                           >  2:1347981/1‑151
                                                                         GGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAG                                                                                           <  1:4650520/151‑1
                                                                          GCTAGACAGCAAGGACACCCCGGTAGAGCGCTCTCCGGGGTTTTTCGGGGATCCTGGCCGCCTGGAAATGCTTCAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGG                                                                                          <  2:6737416/151‑1
                                                                          GCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGG                                                                                          >  2:8447395/1‑151
                                                                             AGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCC                                                                                       <  1:4932962/151‑1
                                                                                AAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGAg                                                                                    >  1:7346835/1‑150
                                                                                  cCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTA                                                                                  <  2:2525558/150‑1
                                                                                  GCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTA                                                                                  >  2:7427890/1‑151
                                                                                    AAGGAAACCCCGGTAGAGCGATCTCCGTGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATG                                                                                >  1:1429788/1‑151
                                                                                    AAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGAGTATG                                                                                >  2:7192271/1‑151
                                                                                     AGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGC                                                                               >  1:10623207/1‑151
                                                                                         AACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAA                                                                           <  1:9181551/151‑1
                                                                                           CCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGAGCAAGC                                                                         >  1:5253633/1‑151
                                                                                             CCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCT                                                                       <  1:9469451/151‑1
                                                                                              CGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTG                                                                      >  2:7914882/1‑151
                                                                                               GGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGA                                                                     <  2:6102874/151‑1
                                                                                                 TAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACC                                                                   >  2:871563/1‑151
                                                                                                       GATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCC                                                             >  1:7842582/1‑151
                                                                                                          CTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTG                                                          <  2:8566201/151‑1
                                                                                                              GGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACC                                                      <  1:431918/151‑1
                                                                                                               GGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCGTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCG                                                     <  2:4102319/151‑1
                                                                                                                 GTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAAGACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCA                                                   <  1:5838210/151‑1
                                                                                                                     TTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCAT                                               >  1:10756434/1‑151
                                                                                                                     TTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCAT                                               <  1:393590/151‑1
                                                                                                                          GGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGTCCCTCTCCCTGTACCGCAGCATCTGtt                                          >  1:8261205/1‑149
                                                                                                                           GATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATC                                         >  2:10962219/1‑151
                                                                                                                               CTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATC                                     >  1:11232798/1‑151
                                                                                                                                  GCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAG                                  <  2:11157417/151‑1
                                                                                                                                       CTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGTGTGTGCGCAAGCCTGACCCTCTCCCGGTACCGCAGCTTCTGATCGATCAAGCGGCG                             >  2:5707366/1‑151
                                                                                                                                       CTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCACGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACG                             >  2:11384499/1‑151
                                                                                                                                        TGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGC                            >  2:2896659/1‑151
                                                                                                                                           AAATTCTTAATGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCTCACGGTCAATACGGCGTCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCTAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGT                         <  2:9863907/151‑1
                                                                                                                                           AAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGT                         <  1:1218685/151‑1
                                                                                                                                           AAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGT                         >  2:3172045/1‑151
                                                                                                                                           AAATGCTTAAGGCTTAGCATAATGATCTGACTTATGTTGAGCGCCGCCCGGACAATACGGCTGATCCGGGCTGCGCGTAACTTAGGGACTATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATATGATCGATCAAGCGACGATGT                         <  2:11474910/151‑1
                                                                                                                                             ATGCTTAAGGCTTCGCATACTGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTAC                       <  1:4778056/151‑1
                                                                                                                                                CTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCG                    <  2:4554973/151‑1
                                                                                                                                                 TTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGC                   <  1:11116886/151‑1
                                                                                                                                                      GCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCT              >  1:8170628/1‑151
                                                                                                                                                       CTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTC             <  2:2298850/151‑1
                                                                                                                                                         TCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGC           <  1:8846440/151‑1
                                                                                                                                                          CGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCG          >  1:398396/1‑151
                                                                                                                                                          CGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCG          <  1:7118629/151‑1
                                                                                                                                                           GCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGA         >  1:7694349/1‑151
                                                                                                                                                            CATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCTTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCACTGTACCGCAGCATCTGATCGATCAATCGACGCTGTACGCGCCGTCTCGCGAT        >  1:2833399/1‑151
                                                                                                                                                              TAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCC      >  2:9299081/1‑151
                                                                                                                                                               AATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCT     >  1:2191482/1‑151
                                                                                                                                                                ATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTC    >  2:4681837/1‑151
                                                                                                                                                                 TGCTCGGCCTTATGTTGAGCGCCGCCCGGTCAATACGGCGGCTCCGGGCGGCGCGTAACATTGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTTACGCAGCATCTGATCGTTCAAGCGACGCGGTACGCGCCGTCTCGCGATGCTC  >  2:5927062/1‑150
                                                                                                                                                                 TGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCT   <  1:7584394/151‑1
                                                                                                                                                                 TGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCT   <  2:1524626/151‑1
                                                                                                                                                                 TGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCT   >  2:1975269/1‑151
                                                                                                                                                                 TGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCT   <  2:2707447/151‑1
                                                                                                                                                                  GCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCACGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  >  2:7710751/1‑151
                                                                                                                                                                  GCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  2:2201313/151‑1
                                                                                                                                                                  GCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  1:6730621/151‑1
                                                                                                                                                                                                                                                                                                                         
GAGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_008463/3175859‑3175697
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgcataatgCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  NC_008463/3177289‑3177140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.