| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,426,133 | Δ1 bp | intergenic (+104/+138) | mexY → / ← PA14_RS15615 | multidrug efflux RND transporter permease subunit MexY/YjiK family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,426,131 | 0 | C | . | 99.1% | 2129.8 / 7.2 | 440 | intergenic (+102/+140) | mexY/PA14_RS15615 | multidrug efflux RND transporter permease subunit MexY/YjiK family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (213/221); minor base G (1/3); total (214/226) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 466 total aligned reads displayed.
GCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTC > NC_008463/3425982‑3426276 | gcgcCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTc < 1:1630183/150‑1 (MQ=255) cgccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTcc < 1:9064137/150‑1 (MQ=255) gccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccg < 1:7111520/150‑2 (MQ=255) ccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccgg < 1:916839/150‑3 (MQ=255) ccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccgg > 1:413368/1‑148 (MQ=255) cgcgCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccggc > 2:7974848/1‑147 (MQ=255) cACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAAc > 1:168632/1‑150 (MQ=255) aCCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCCCCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACg > 1:9516066/1‑150 (MQ=255) aCCGGCACCGCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACg > 2:6054534/1‑150 (MQ=255) ccGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACgg > 1:3964898/1‑150 (MQ=255) ggCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGcc > 1:10078024/1‑150 (MQ=255) ccTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGa < 1:5912286/150‑1 (MQ=255) gCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCtt < 1:840751/150‑1 (MQ=255) gCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCtt < 2:3059444/150‑1 (MQ=255) gCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCtt < 2:899722/150‑1 (MQ=255) ccccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTc < 2:2925170/150‑1 (MQ=255) cccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGTCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCg < 1:8038293/150‑1 (MQ=255) cccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCg > 2:1418593/1‑150 (MQ=255) cccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCg > 1:6503213/1‑150 (MQ=255) ccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgg > 2:8801189/1‑150 (MQ=255) cGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCggg > 2:1977494/1‑150 (MQ=255) gATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCGCGCTCCCCACCCGGGCACTGTGCGGCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGc < 1:2229130/150‑1 (MQ=255) cccGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAg < 2:4497083/150‑1 (MQ=255) cGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑GCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGga < 1:10352748/150‑1 (MQ=255) cGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGga > 2:2739293/1‑150 (MQ=255) gAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGgacg > 1:8499642/1‑150 (MQ=255) cAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACt < 1:3292881/150‑1 (MQ=255) aGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTgg < 1:5227593/150‑1 (MQ=255) gCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGc < 2:5769292/150‑1 (MQ=255) cTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCaa > 2:4186829/1‑150 (MQ=255) tGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAc < 2:7769772/150‑1 (MQ=255) tGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAc < 2:2424729/150‑1 (MQ=255) cgATGCCCCCCGCGAAACTCTCGCTCCCCACCCTGGCACTGGGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCACCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAc < 2:4680995/149‑1 (MQ=255) tGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagc > 1:574228/1‑150 (MQ=255) tGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagc > 1:7199829/1‑150 (MQ=255) ccccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagcag < 2:2224684/150‑1 (MQ=255) ccccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagcag < 1:10157263/150‑1 (MQ=255) cccTAGCGAAACTCTCGCTCCCCCCCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGt < 2:702173/150‑1 (MQ=255) gCGAAACTCTCGCTCCCCACCATGCCACGCTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCAcc < 1:1438101/150‑1 (MQ=255) aaaCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAc > 1:1935819/1‑150 (MQ=255) aCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAccc < 2:5554597/150‑1 (MQ=255) aCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAccc < 1:597492/150‑1 (MQ=255) ctcGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgct < 1:232418/150‑1 (MQ=255) ctcGCTCCCCACCCTGGCACGGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgct < 2:8497539/150‑1 (MQ=255) gCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgctgct < 1:6570439/150‑1 (MQ=255) gCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgctgct < 2:10399882/150‑1 (MQ=255) tCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCtgctgc > 2:1671876/1‑150 (MQ=255) cccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGa > 1:1324819/1‑150 (MQ=255) cccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCGGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGAGCGTT‑CCGGCCACCGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGa < 2:3194615/150‑1 (MQ=255) ccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGAc < 2:6200590/150‑1 (MQ=255) ccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGAc > 1:7837913/1‑150 (MQ=255) aCCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAg > 2:7155612/1‑150 (MQ=255) cccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAga > 2:3458236/1‑150 (MQ=255) cccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGAGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAga > 1:2498216/1‑150 (MQ=255) ccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat > 2:8161405/1‑150 (MQ=255) ccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat < 2:493016/150‑1 (MQ=255) tGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgatga > 1:4506362/1‑150 (MQ=255) aCTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCgg > 1:4596914/1‑150 (MQ=255) cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc < 2:2846390/150‑1 (MQ=255) cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc > 1:3659536/1‑150 (MQ=255) cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc < 1:7444217/150‑1 (MQ=255) cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc < 2:9292679/150‑1 (MQ=255) cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCGTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc > 2:3781416/1‑150 (MQ=255) gtgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTa < 2:10164165/150‑1 (MQ=255) gCGTCGGGCTGCTCGGCGCCGGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAcg < 2:9455413/150‑1 (MQ=255) gTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAcgcg > 1:973864/1‑150 (MQ=255) tCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACgcgc < 1:9773652/150‑1 (MQ=255) cGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCGGTTCACCGACCCGCTGCTGCGACAGCTGATCGGCTACGCGcc > 1:9451480/1‑150 (MQ=255) cGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGcc < 2:2658827/150‑1 (MQ=255) gggCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCg > 1:7056495/1‑150 (MQ=255) ggCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCgg > 1:5680091/1‑150 (MQ=255) ggCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCgg < 1:8796565/150‑1 (MQ=255) ggCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCgg > 2:6469668/1‑150 (MQ=255) ggCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCgg > 1:541368/1‑150 (MQ=255) gctgctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGgc < 1:10534122/150‑1 (MQ=255) gctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCt > 1:1124989/1‑150 (MQ=255) tCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTAt < 1:6902533/150‑1 (MQ=255) cgcCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCgg < 2:1154353/150‑1 (MQ=255) gcCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgc < 1:5016749/150‑1 (MQ=255) ccTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgcg < 2:5315614/150‑1 (MQ=255) tGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgcgcg > 2:9760061/1‑150 (MQ=255) tGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgcgcg > 1:4885147/1‑150 (MQ=255) cccACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCa < 1:619029/150‑1 (MQ=255) aCCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGc > 1:2714204/1‑150 (MQ=255) ccGACGCCTCGGCAGCCGCGCGCGGCCCCGATCG‑TGCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGcc < 2:6733480/150‑1 (MQ=255) gACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTg < 1:2442902/150‑1 (MQ=255) aCGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGa < 2:5177484/150‑1 (MQ=255) ccTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCAGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCAAACCGGCGCGCAAGCCTGAAtt > 1:2107533/1‑150 (MQ=255) cTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTc < 1:9820699/150‑1 (MQ=255) tCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTcc < 1:3757632/150‑1 (MQ=255) gCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccgcc > 1:9412730/1‑150 (MQ=255) gCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTc > 2:9100904/1‑150 (MQ=255) cgcgcgcgGCCCCGCTCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCt < 1:8907880/150‑1 (MQ=255) cgcgcgcgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCt < 1:2904975/150‑1 (MQ=255) cgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTccc > 1:5869192/1‑150 (MQ=255) ggCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCg > 1:3866782/1‑150 (MQ=255) cGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTa > 2:4048475/1‑150 (MQ=255) gATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAg < 1:8161405/150‑1 (MQ=255) caTCGTT‑CCGCCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACAGGCAACACCAGTTCACCGCCCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAg < 2:7263763/149‑1 (MQ=255) aTCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGt < 1:7540488/150‑1 (MQ=255) | GCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTC > NC_008463/3425982‑3426276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |