| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 4,819,717 | (C)5→4 | intergenic (‑115/+55) | PA14_RS22115 ← / ← lepB | DUF4845 domain‑containing protein/signal peptidase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 4,819,713 | 0 | C | . | 97.8% | 1689.1 / 20.5 | 357 | intergenic (‑111/+59) | PA14_RS22115/lepB | DUF4845 domain‑containing protein/signal peptidase I |
| Reads supporting (aligned to +/- strand): ref base C (0/8); new base . (180/169); total (180/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.37e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 390 total aligned reads displayed.
CAGCAGGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGCCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGCC > NC_008463/4819564‑4819858 | cagcagGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGagcagc < 2:3605527/150‑1 (MQ=255) gcagGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGccc < 2:831721/150‑1 (MQ=255) agGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAATGCGGGGCTGCCCTCGGGAGCAGccccg > 2:4205699/1‑149 (MQ=255) agGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGccccg < 1:1656272/150‑2 (MQ=255) gggACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGccccgc > 2:2751830/1‑148 (MQ=255) ggACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGccccgct < 2:5749257/150‑4 (MQ=255) aCATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTc > 1:345572/1‑150 (MQ=255) ccccTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGa > 2:326366/1‑150 (MQ=255) cTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGatta > 1:7038175/1‑150 (MQ=255) tCTGCGAACGCGCTAACCTCTTGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGattatt < 2:8769714/150‑1 (MQ=255) cGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTcagc > 1:10318149/1‑150 (MQ=255) gAACGCGCGACCCTCAGGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGCGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTcagca < 2:10578823/150‑1 (MQ=255) aaCGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTcagcag > 2:8251075/1‑150 (MQ=255) aaCGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTcagcag > 2:7235736/1‑150 (MQ=255) aCGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAgg > 2:3217602/1‑150 (MQ=255) gcgcgAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAATGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAg > 2:3464738/1‑150 (MQ=255) gcgcgAACCTCATGTCGGACCTCATGTCAGGGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAg > 2:7121561/1‑150 (MQ=255) aaCCTCATGTCGGACCTCATGTCTGTGTCGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAACGCGGGGCTGCCCGCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGccc < 2:7369282/150‑1 (MQ=255) aCCTCATGTCGGACCTCATGCCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCTTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCt < 2:10216469/150‑1 (MQ=255) ccTCATGTCGGACCTCCGGTCATGGTCGTTTTTCCGTCCCGCGAGCGGTAC‑CGCC‑AGCGGGCAGGGCCCTGCGGCGGCGTTCGCGGATGTGACAGCGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCtt < 2:1959208/150‑1 (MQ=255) tCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTg > 1:6717054/1‑150 (MQ=255) cgtcccgcATGTCTGTGTAGTTATTCCGCCCTGCGTGCGTTAC‑CGCC‑ATCGGGCAGGGCCGGGCGGCGGCGTTCGCGGAAGTGAACGCGGGGCTGCCCTCGGGAGCA‑CCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTgg < 1:8580739/143‑1 (MQ=255) cGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTgg > 2:5979901/1‑150 (MQ=255) cGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCATCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTgg > 2:5499929/1‑150 (MQ=255) aCCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCTGGAGCGCCCTTCCGCGTGGCGa > 2:7611169/1‑150 (MQ=255) cTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAc > 2:9573517/1‑150 (MQ=255) tCATGTCCGTGTCTTTATCCCTCCCTGCGAGCGTTAC‑CCCC‑ATGGGGCTGGGCCCGGCGGCGGCGTTCGCGTACGTGAACGGGGGGCGGCCCTGGGGAGCCG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAcc < 1:3644791/150‑1 (MQ=255) tCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAcc > 2:4792142/1‑150 (MQ=255) tCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAcc > 1:4324879/1‑150 (MQ=255) tctgggtAGTTATCCCGTCCAGCGAGCGGTAC‑CGCC‑ATCGGGCAGGGCCCGGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTgcgc < 2:784988/145‑1 (MQ=255) ctgtgtAGTTATTCCGCCCTGCGAGCGGTAC‑CGCC‑ATCGGGCAGGGCCCTGCGGGGGCGTTCGCGTAAGTGAACGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGca < 1:6226813/148‑1 (MQ=255) gtgtAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGcaca > 1:10680040/1‑150 (MQ=255) gtgtAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGcaca < 2:6927724/150‑1 (MQ=255) gtttttATCCCGTCCAGCGAGC‑GTAA‑CCCCAATCGGGCTGGGCCCTGCGGCGGCTTTCGCGTAAGTTAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAgg < 1:3936187/146‑1 (MQ=255) tAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGt > 1:2950381/1‑150 (MQ=255) ccGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAAt < 2:6071511/150‑1 (MQ=255) cGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATc < 2:6411947/150‑1 (MQ=255) gTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCa > 1:1955385/1‑150 (MQ=255) tCCAGCGAGCGGTAC‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGACGTGAACGGGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCGTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCAc < 1:2479217/150‑1 (MQ=255) ccAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGATGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACg < 2:9432691/150‑1 (MQ=255) ccAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACg > 2:1715999/1‑150 (MQ=255) ctgcttgcgGAAC‑CGCC‑ATGGGGCTGGGCCGTGGGGGGGCGTTCGCGTAAGTTAATGGGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGc < 1:8251075/144‑1 (MQ=255) ccgcgagggTAACCGCC‑AGGGGGCTGGGCCGGGGGGGGGCGTGCGCGGATGTTACAGGGGGGCGGCCCGGGGTAGC‑CCCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGc < 1:1044358/143‑1 (MQ=255) agcgagcgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGcc > 2:1653637/1‑150 (MQ=255) agcgagcgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGcc < 2:1553337/150‑1 (MQ=255) gcgagcgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCg > 2:8550501/1‑150 (MQ=255) cgagcgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGa < 2:88893/150‑1 (MQ=255) cgagcgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGa < 2:5949558/150‑1 (MQ=255) cgagcgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCGCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGa > 1:9008647/1‑150 (MQ=255) cgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGATGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCg < 2:9209756/150‑1 (MQ=255) cgGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCg > 2:2625943/1‑150 (MQ=255) ggTAA‑CGCA‑ATCGGGCAGGGCCCTGCGGCGGGGTTCGCGGATGTTAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCgg < 2:8090843/150‑1 (MQ=255) gTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAACGCGGGGCTGCCCTCGGGCGCCG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCggg < 1:7650340/150‑1 (MQ=255) gTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGAGAATCACGCCGACCCggg > 1:10280220/1‑150 (MQ=255) cGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGaa > 1:419906/1‑150 (MQ=255) cGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGaa > 1:527689/1‑150 (MQ=255) gCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAg > 2:1828814/1‑150 (MQ=255) c‑ATCGGGCTGGGCCCGGGGGCGGCGTTCGCGTATGTGAACGGGGGGCTGCCCTCGGGCGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGtt < 1:2111730/150‑1 (MQ=255) cTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCa > 2:2534276/1‑150 (MQ=255) tGCGGCGGCGTTCGCGTACGTTAACGGGGGGCTGCCCTGGGTAGCCG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCAt < 1:158717/150‑1 (MQ=255) gcggcggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATc > 1:5686762/1‑150 (MQ=255) gcggcggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATc < 2:5182788/150‑1 (MQ=255) cggcgTTCGCGGACGTTAACGCGGGGCTGCCCTCGGTAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGATTGCTCATCTTCg < 1:10004247/150‑1 (MQ=255) ggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGCAGCAG‑CCCCGGTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGGCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCGTCgg > 2:2105419/1‑150 (MQ=255) gcgTTCGCGTATGTTAACGCGGGGCGCCCCTCGGTAGCA‑CCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGa < 1:7176872/150‑1 (MQ=255) cgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGAt < 2:9753246/150‑1 (MQ=255) cgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGAt < 2:10035927/150‑1 (MQ=255) gTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATc > 1:9113783/1‑150 (MQ=255) ttCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCg > 1:9251489/1‑150 (MQ=255) ttCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCg > 1:3669722/1‑150 (MQ=255) tCGCGGATGTGAACGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCgg < 1:4879086/150‑1 (MQ=255) cgGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGcc < 2:2873691/150‑1 (MQ=255) cgGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCGTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGcc > 1:5495650/1‑150 (MQ=255) ggAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCGTCGCGAGTATTCAGCAGGAGCGCCCGTCCGCGTGGCGAACCTGCGCACCGGTCCGGGAATCACGCCGTCCCGGGAGAAGTTCGGCCGGTTGCTCATCGTCGGAGCGGGCCa > 2:3917873/1‑150 (MQ=255) atgTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGc < 1:8667496/148‑1 (MQ=255) aaGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGc > 1:9292326/1‑150 (MQ=255) aGTTAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCt < 1:877110/150‑1 (MQ=255) gTGAAAGGGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTc < 1:7846761/150‑1 (MQ=255) gAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCAt < 2:5344103/150‑1 (MQ=255) gAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCAt > 2:4599500/1‑150 (MQ=255) aaGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATcc > 1:6429087/1‑150 (MQ=255) ggggggCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCcac < 1:4568027/148‑1 (MQ=255) gggggCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCcaca < 1:4148989/149‑1 (MQ=255) cGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCTTCcaca > 2:432151/1‑150 (MQ=255) ggggCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCacac < 1:6861731/150‑1 (MQ=255) gggCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACg > 1:9479173/1‑150 (MQ=255) gggCGGCCCGCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACg < 2:3779592/150‑1 (MQ=255) gcggCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGc < 2:7994551/147‑1 (MQ=255) gCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGc > 2:10711645/1‑150 (MQ=255) cccTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAg > 2:6765880/1‑150 (MQ=255) cccTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAg < 2:4943914/150‑1 (MQ=255) cccTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAg > 2:6167185/1‑150 (MQ=255) cTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGc < 1:7504037/150‑1 (MQ=255) cTCGGCAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGc < 2:9355462/150‑1 (MQ=255) cGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCt < 2:4734140/150‑1 (MQ=255) gggAGCTG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCtt < 2:659890/150‑1 (MQ=255) ggAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTg > 2:6856637/1‑150 (MQ=255) gAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGc < 1:6057730/150‑1 (MQ=255) agcag‑cCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGcc < 1:5028216/150‑1 (MQ=255) agcag‑cCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGcc > 2:1346305/1‑150 (MQ=255) | CAGCAGGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAA‑CGCC‑ATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGCCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGCC > NC_008463/4819564‑4819858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |