| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,594,625 | Δ1 bp | coding (1041/1350 nt) | nuoF ← | NADH‑quinone oxidoreductase subunit NuoF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,594,622 | 0 | G | . | 98.4% | 2405.0 / 29.9 | 502 | coding (1044/1350 nt) | nuoF | NADH‑quinone oxidoreductase subunit NuoF |
| Reads supporting (aligned to +/- strand): ref base G (5/3); new base . (257/237); total (262/240) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 527 total aligned reads displayed.
CAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAGGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGGAAACCATGTTGATGCTGTCGTCCACCGCCATGGGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGCTGCCA > NC_008463/2594472‑2594768 | cAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGcagcag > 1:3905499/1‑150 (MQ=255)cAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGcagcag > 2:3195036/1‑150 (MQ=255) ttGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAggga < 1:8552229/150‑2 (MQ=255) cTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGaaac < 2:5778878/150‑2 (MQ=255) tGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAgggaaccca > 2:7413707/1‑144 (MQ=255) tGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCa > 2:5416138/1‑150 (MQ=255) gggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGt < 1:1031667/150‑1 (MQ=255) gggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGt < 1:7324635/150‑1 (MQ=255) gTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTg > 1:5691026/1‑150 (MQ=255) tctcGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGa < 1:4674935/150‑1 (MQ=255) tcGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATg > 1:1081070/1‑150 (MQ=255) cGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGc < 2:8267408/150‑1 (MQ=255) cGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGc < 1:9845703/150‑1 (MQ=255) cGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGc < 1:1830296/150‑1 (MQ=255) gAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCt < 1:8290104/150‑1 (MQ=255) gAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCt > 1:7146452/1‑150 (MQ=255) aGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGACGCGGCA‑GGGGCTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCATCA‑GGGAAACCAGGTTGATGCTg > 2:6529273/1‑150 (MQ=255) cGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTgtcgt < 1:8881344/150‑1 (MQ=255) gCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTgtcgtc > 2:3662996/1‑150 (MQ=255) gCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTgtcgtc < 1:3586611/150‑1 (MQ=255) ccGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTcc < 2:7827262/150‑1 (MQ=255) ccGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTcc > 1:4913084/1‑150 (MQ=255) gggCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAc > 2:2777171/1‑150 (MQ=255) gggCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAc > 1:9235121/1‑150 (MQ=255) ggCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAcc > 1:282940/1‑150 (MQ=255) ggCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAcc < 1:5414271/150‑1 (MQ=255) gCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCg > 2:2974574/1‑150 (MQ=255) cTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGc > 2:5654095/1‑150 (MQ=255) ggCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCa > 2:1221837/1‑150 (MQ=255) gCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAt < 2:4746960/150‑1 (MQ=255) ccTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATg < 1:996697/150‑1 (MQ=255) cGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATggcca > 1:6935818/1‑147 (MQ=255) ccACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGACACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAgg > 2:8868900/1‑150 (MQ=255) cACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCAGGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGc > 2:7206978/1‑150 (MQ=255) aCGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGACACCAGGTTGATGCTGTCGTCCAGCGCCAT‑GGCCAGGcc > 2:2160879/1‑150 (MQ=255) aCGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGcc < 1:10502073/150‑1 (MQ=255) cGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCg > 2:3914828/1‑150 (MQ=255) ctctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGt > 1:9480094/1‑150 (MQ=255) tctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTg > 2:4402334/1‑150 (MQ=255) ctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGc > 2:1621489/1‑150 (MQ=255) tAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGcc > 2:6880084/1‑150 (MQ=255) gggCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCa > 2:10616129/1‑150 (MQ=255) ggCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCAt > 2:9683120/1‑150 (MQ=255) gcgcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATc > 2:3260804/1‑150 (MQ=255) gcgcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATc > 2:8595057/1‑150 (MQ=255) cgcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATcc > 1:3131033/1‑150 (MQ=255) gcagcaGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCggg < 2:3557636/150‑1 (MQ=255) ttCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGAcc < 2:2017845/150‑1 (MQ=255) tCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt < 2:8078466/150‑1 (MQ=255) tCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt < 1:9744837/150‑1 (MQ=255) tCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt < 1:4327762/150‑1 (MQ=255) cACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCtt > 1:4187832/1‑150 (MQ=255) cACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCtt > 2:5089759/1‑150 (MQ=255) cGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTgg > 1:6829410/1‑150 (MQ=255) cTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCg < 1:2377893/150‑1 (MQ=255) gCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATgccgc > 1:7635986/1‑150 (MQ=255) cAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATgccgcc > 2:9247731/1‑150 (MQ=255) ggCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCgg < 2:1891570/150‑1 (MQ=255) ggCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCgg > 1:7826152/1‑150 (MQ=255) ccGTCGCGGCA‑GGGGGTGCACGAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCTTCCGGGTGGCGACCTTGGCGTTGCCGCCGGCg < 2:9431817/150‑1 (MQ=255) gTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGaa > 1:7959751/1‑150 (MQ=255) cgGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATc < 1:1254075/150‑1 (MQ=255) ggcagggggTGCACCAGCCGCAGGACTCGCGGGCGACGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCt > 2:599493/5‑150 (MQ=255) ggcagggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCt > 2:1350943/5‑150 (MQ=255) ggcagggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCt < 1:2727826/146‑1 (MQ=255) gcagggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTg > 1:8093581/4‑150 (MQ=255) cagggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTgc < 1:1687504/148‑1 (MQ=255) cagggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTgc < 1:1490715/148‑1 (MQ=255) gggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTgcgc > 2:2717749/1‑150 (MQ=255) tGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCa < 2:4418456/150‑1 (MQ=255) aGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCt > 1:25460/1‑150 (MQ=255) ccGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTcc < 1:2282414/150‑1 (MQ=255) ccGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTcc > 2:4590693/1‑150 (MQ=255) cAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCggg > 2:2283881/1‑150 (MQ=255) cAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCAGCGCATCCAGGTGCTCCggg < 1:9163165/150‑1 (MQ=255) ggACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAg > 1:204594/1‑150 (MQ=255) gACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGc > 1:7571257/1‑150 (MQ=255) gACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCAGGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGc > 1:6887370/1‑150 (MQ=255) cTCGCGGGCGAAGAACTCTTCCAGGGTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAg < 1:5874150/150‑1 (MQ=255) cgcgGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGa > 1:3994258/1‑150 (MQ=255) gggCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGc > 2:1012815/1‑150 (MQ=255) gggCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGc > 1:10000496/1‑150 (MQ=255) ggCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGcc < 2:10515824/150‑1 (MQ=255) aagaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTa < 2:10343447/150‑1 (MQ=255) aagaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTa < 1:10261046/150‑1 (MQ=255) agaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTAc < 2:9050799/150‑1 (MQ=255) agaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTAc < 1:6080326/150‑1 (MQ=255) agaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTACCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTAc < 2:1639537/150‑1 (MQ=255) ctctTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGgc > 1:956716/1‑150 (MQ=255) ctTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGgcgc < 1:3847078/150‑1 (MQ=255) ctTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGgcgc > 1:10581360/1‑150 (MQ=255) ttCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGcgcc > 2:6198893/1‑150 (MQ=255) ttCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGcgcc > 1:6628237/1‑150 (MQ=255) tCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGcgccg < 1:221302/150‑1 (MQ=255) cATGTTGCGCAGCA‑GGGAAACCATGTTGCTGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCgccgcc < 1:1900850/150‑1 (MQ=255) gTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGGGCCGCCggg < 2:2473703/150‑1 (MQ=255) ttGCGCAGCA‑GGGAAACCCTGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGc < 2:6727540/150‑1 (MQ=255) ttGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGc < 2:2445683/150‑1 (MQ=255) ttGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGc < 1:10082266/150‑1 (MQ=255) gcagca‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGCTGcc < 1:3450572/150‑1 (MQ=255) | CAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAGGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGGAAACCATGTTGATGCTGTCGTCCACCGCCATGGGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGCTGCCA > NC_008463/2594472‑2594768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |