Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_008463 | 2,787,882 | +G | pseudogene (960/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 2,787,881 | 1 | . | G | 99.4% | 1296.8 / ‑1.6 | 330 | pseudogene (959/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
Reads supporting (aligned to +/- strand): ref base . (0/2); new base G (146/182); total (146/184) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.05e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 330 total aligned reads displayed.
CATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCC‑A‑GGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑G‑TGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAAC > NC_008463/2787741‑2788023 | cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaa > 2:7085524/1‑150 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaa > 1:115673/1‑150 (MQ=255) aTGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaag < 2:353052/150‑1 (MQ=255) aTGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaag > 2:5091084/1‑150 (MQ=255) cTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCTTGGCCACGG‑TGAAGAAGAAc > 2:6875958/1‑150 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcc > 2:5924295/1‑150 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcc < 1:7527251/150‑1 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcc < 2:6074452/150‑1 (MQ=255) gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcct < 2:10253475/150‑2 (MQ=255) ctCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcctg < 1:7332361/149‑3 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcctgg < 1:9680769/150‑4 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcctgg < 2:158879/150‑4 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcctgg < 1:5103316/150‑4 (MQ=255) cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcctggt > 1:10409157/1‑146 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGaa > 1:8701677/1‑150 (MQ=255) agaACAGCCGGGACGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAg < 2:4377660/150‑1 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAgg < 2:2881623/150‑1 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAgg < 1:2584817/150‑1 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAgg > 1:2936645/1‑150 (MQ=255) aaCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggc < 1:2724145/150‑1 (MQ=255) aaCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggc > 2:7563017/1‑150 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcg > 2:7231009/1‑150 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcg > 2:4757088/1‑150 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcg > 2:2159371/1‑150 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcgg > 1:9216421/1‑150 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcgg > 2:8139063/1‑150 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcgg < 1:6359744/150‑1 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggcg < 1:8627936/150‑1 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggcgc < 1:1371503/150‑1 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggcgc < 2:6744925/150‑1 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg < 1:2827080/150‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCTCCCTGGTGGACAAGGGC‑GTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTgg < 2:2631520/150‑1 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt > 2:4157741/1‑150 (MQ=255) gTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg > 2:8390878/1‑150 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTAGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGAt > 2:6513290/1‑150 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg > 2:3298359/4‑150 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGAGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg > 1:5621181/4‑150 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg > 2:2755897/3‑150 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg < 2:4255833/148‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg > 1:9461001/3‑150 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt > 1:6164472/2‑150 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 1:2347966/149‑1 (MQ=255) gTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctc > 2:3108235/1‑150 (MQ=255) tcggCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctct < 2:1047435/147‑1 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCtt > 2:887433/3‑150 (MQ=255) gCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc < 1:10155696/150‑1 (MQ=255) ccAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCt < 2:1163803/150‑1 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTg > 2:5253300/1‑150 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTg < 2:4194234/150‑1 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTg > 2:3670681/1‑150 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt > 1:7459318/1‑150 (MQ=255) cgcCTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTc < 1:839161/150‑1 (MQ=255) ccTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt > 2:6223411/1‑150 (MQ=255) ccTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGAC‑ATGGCCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt > 1:4779166/1‑150 (MQ=255) cTGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc < 1:8103450/150‑1 (MQ=255) tGGAGGAGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg < 2:1835008/150‑1 (MQ=255) ggaggaGATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg < 2:7771620/150‑1 (MQ=255) gaggagATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc > 1:9855859/1‑150 (MQ=255) gaggagATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc < 1:7622995/150‑1 (MQ=255) gaggagATCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc < 1:5477092/150‑1 (MQ=255) gaTCAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACAt < 2:768909/150‑1 (MQ=255) tCACCCGGACCCTG‑CCC‑ACGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCAC‑GCTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGAGCTCTTCCTGTTCCTCGGCAACATcc < 2:1431904/150‑1 (MQ=255) cAACCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcg < 2:5522030/150‑1 (MQ=255) aaCCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc > 2:9409267/1‑150 (MQ=255) aaCCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCGGTTCATCGGCAACATCcgc > 2:2474490/1‑150 (MQ=255) aCCGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg > 1:3752950/1‑150 (MQ=255) ccGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc < 1:4463935/150‑1 (MQ=255) cGGACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 2:9182735/150‑1 (MQ=255) ggACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCACCATCCGCgcgg > 2:4630603/1‑150 (MQ=255) gACCCTGCCCC‑A‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggc < 2:3876354/150‑1 (MQ=255) gACCCTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggc < 1:3165117/150‑1 (MQ=255) ccTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 1:1696574/150‑1 (MQ=255) cTG‑CCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCGACATCCGCGCGGCGCTg < 1:9553264/150‑1 (MQ=255) gcccaa‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt < 1:6594604/145‑1 (MQ=255) gcccaa‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt < 1:4230130/145‑1 (MQ=255) a‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg < 1:893615/150‑1 (MQ=255) a‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg < 1:7127666/150‑1 (MQ=255) gtcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGTCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccacc > 2:10340869/7‑150 (MQ=255) tcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccacca > 1:10188869/6‑150 (MQ=255) tcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccacca < 1:9806935/145‑1 (MQ=255) caaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcat < 1:6781261/146‑1 (MQ=255) caaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcat > 1:2109000/5‑150 (MQ=255) aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca > 1:7768887/3‑150 (MQ=255) aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca < 1:6414742/148‑1 (MQ=255) aTCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCCTCATCCCg < 1:5996934/150‑1 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt < 2:6443035/150‑1 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt < 1:10449640/150‑1 (MQ=255) cGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc < 2:8225448/150‑1 (MQ=255) gTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCg < 1:329079/150‑1 (MQ=255) cTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt < 1:303220/150‑1 (MQ=255) tACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATg > 2:3660436/1‑150 (MQ=255) tACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATg > 2:7496537/1‑150 (MQ=255) aCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc > 1:5210580/1‑150 (MQ=255) aCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc > 1:356515/1‑150 (MQ=255) aCCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt < 2:86730/150‑1 (MQ=255) caccacCCTGGTGGACCAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcac > 2:8014657/1‑150 (MQ=255) aaggccgTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTc < 2:5606678/144‑1 (MQ=255) aaggccgTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTc > 2:9509558/7‑150 (MQ=255) ccgTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCa > 1:1271575/3‑150 (MQ=255) gTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAAc < 1:7939766/150‑1 (MQ=255) | CATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCC‑A‑GGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑G‑TGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAAC > NC_008463/2787741‑2788023 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |