Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_008463 5,131,729 Δ34 bp pseudogene (288‑321/1180 nt) PA14_RS23490 ← acyl‑CoA dehydrogenase family protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_008463 5131729 5131762 34 598 [0] [1] 598 PA14_RS23490 acyl‑CoA dehydrogenase family protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_008463 = 51317280 (0.000)534 (1.250) 206/262 0.0 100% pseudogene (322/1180 nt) PA14_RS23490 acyl‑CoA dehydrogenase family protein
?NC_008463 5131763 = 0 (0.000)pseudogene (287/1180 nt) PA14_RS23490 acyl‑CoA dehydrogenase family protein

Only 100 of 598 total aligned reads displayed.

ACCGCCGTGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGGCGCAGCGATGTCCGAATGTAGGGCGCAGCGATGTCCGAATGCAGGGAGAAACCGATCCCGGTCAGGCCGGCCCGACCGATCTCTTCGATGACCACGGCGCTGTAGAGGAAGTCCGCGCCCATCCCGCCATACTCTTCCGGCAGGTGCG  >  NC_008463/5131579‑5131877
                                                                                                                                                     |                                                                                                                                                     
  cgccgTGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtc                                                                                                                                                     <  2:7323604‑M1/150‑3 (MQ=255)
  cgccgTGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtc                                                                                                                                                     <  2:1653159‑M1/150‑3 (MQ=255)
    ccgTGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccg                                                                                                                                                   >  2:9867951‑M1/1‑146 (MQ=255)
    ccgTGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccg                                                                                                                                                   <  1:6585749‑M1/150‑5 (MQ=255)
      gTGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaa                                                                                                                                                 >  1:7374118‑M1/1‑144 (MQ=255)
       tGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaat                                                                                                                                                >  1:5294098‑M1/1‑143 (MQ=255)
        ggTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatg                                                                                                                                               <  2:1741711‑M1/150‑9 (MQ=255)
          tCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgca                                                                                                                                             >  2:124294‑M1/1‑140 (MQ=255)
            ttCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagg                                                                                                                                           <  1:6862486‑M1/150‑13 (MQ=255)
             tCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcaggg                                                                                                                                          <  1:2035047‑M1/150‑14 (MQ=255)
              cACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCAGGGCGATGGCCGCGACCATCTCGCCGGAGACCAGCTTCGGCAGGTACTTGCGCGTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcaggga                                                                                                                                         <  2:10369181‑M1/150‑15 (MQ=255)
               aCCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggag                                                                                                                                        >  1:7052815‑M1/1‑135 (MQ=255)
                ccccTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGCTGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggaga                                                                                                                                       <  1:4957819‑M1/150‑17 (MQ=255)
                ccccTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggaga                                                                                                                                       >  1:938104‑M1/1‑134 (MQ=255)
                 cccTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaa                                                                                                                                      <  1:2812032‑M1/150‑18 (MQ=255)
                  ccTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaa                                                                                                                                     <  1:4342135‑M1/150‑19 (MQ=255)
                   cTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaac                                                                                                                                    <  2:3446840‑M1/150‑20 (MQ=255)
                    ttGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaacc                                                                                                                                   <  1:1074277‑M1/150‑21 (MQ=255)
                    ttGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaacc                                                                                                                                   >  2:8503686‑M1/1‑130 (MQ=255)
                         ggTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcc                                                                                                                              >  1:3933758‑M1/1‑125 (MQ=255)
                         ggTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcc                                                                                                                              <  1:4125080‑M1/150‑26 (MQ=255)
                         ggTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcc                                                                                                                              <  2:542737‑M1/150‑26 (MQ=255)
                           tCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccg                                                                                                                            <  1:8314937‑M1/150‑28 (MQ=255)
                            cGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccgg                                                                                                                           >  2:4147503‑M1/1‑122 (MQ=255)
                             ggAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggt                                                                                                                          >  2:505304‑M1/1‑121 (MQ=255)
                                 ccGGCCCCCGGCTCTGTCATGGCGATGGCCGCGACCATCTCGCCTGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcagg                                                                                                                      <  2:10091369‑M1/150‑34 (MQ=255)
                                       cccGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcc                                                                                                                <  1:8991520‑M1/150‑40 (MQ=255)
                                        ccGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggccc                                                                                                               <  2:6296819‑M1/150‑41 (MQ=255)
                                           gCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGGAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgac                                                                                                            <  1:10210520‑M1/150‑44 (MQ=255)
                                              cGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccga                                                                                                         >  2:1913532‑M1/1‑104 (MQ=255)
                                              cGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccga                                                                                                         >  1:5418225‑M1/1‑104 (MQ=255)
                                                gTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatc                                                                                                       >  1:7239728‑M1/1‑102 (MQ=255)
                                                  cATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctc                                                                                                     >  1:1370359‑M1/1‑100 (MQ=255)
                                                   aTGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaattcagggagaaaccgatcccggtcaggccggcccgaccgatctct                                                                                                    <  1:3361976‑M1/150‑52 (MQ=255)
                                                    tGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctctt                                                                                                   <  2:7826696‑M1/150‑53 (MQ=255)
                                                    tGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctctt                                                                                                   <  1:3502202‑M1/150‑53 (MQ=255)
                                                    tGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGGGGCGGATGTAGGGCGCAGCGATGtccgaatgcagggagaacccgatcccggtcaggccggcccgaccgatctctt                                                                                                   >  1:9702606‑M1/1‑98 (MQ=255)
                                                    tGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGGAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctctt                                                                                                   >  1:1592849‑M1/1‑98 (MQ=255)
                                                       cGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcga                                                                                                <  2:6616955‑M1/150‑56 (MQ=255)
                                                        gATTGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCTGCGCCTCGCTGCCGTAGTGGAGGATGTCGGGCGCAGCGATGtacgaatgcagggtgtaaccgatcccggtcaggccggcccgaccgatctcttcgat                                                                                               <  2:7929111‑M1/150‑57 (MQ=255)
                                                          tGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatga                                                                                             >  2:9609744‑M1/1‑92 (MQ=255)
                                                            gCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCGGCCGTAGTGGAGGAGGTCGGGCGCAGCGAAGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgacc                                                                                           >  2:5150417‑M1/1‑90 (MQ=255)
                                                              cgcgACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccac                                                                                         <  2:6980194‑M1/150‑63 (MQ=255)
                                                                cgACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacgg                                                                                       <  2:24834‑M1/150‑65 (MQ=255)
                                                                cgACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacgg                                                                                       <  2:7647184‑M1/150‑65 (MQ=255)
                                                                   ccATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgc                                                                                    >  2:3189122‑M1/1‑83 (MQ=255)
                                                                   ccATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgc                                                                                    >  2:485468‑M1/1‑83 (MQ=255)
                                                                    cATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgct                                                                                   >  1:6006355‑M1/1‑82 (MQ=255)
                                                                         cGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtaga                                                                              <  1:32009‑M1/150‑74 (MQ=255)
                                                                            cGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagagga                                                                           <  1:783316‑M1/150‑77 (MQ=255)
                                                                            cGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagagga                                                                           >  1:4800876‑M1/1‑74 (MQ=255)
                                                                              gATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaag                                                                         >  1:2276262‑M1/1‑72 (MQ=255)
                                                                              gATACCAGCTTCGGCAGGTACTTGCGCAACAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcagcccggcccgaccgatctcatcgaagaccacggcgctgtagaggaag                                                                         >  2:8889940‑M1/1‑72 (MQ=255)
                                                                               aTACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagt                                                                        >  2:10244678‑M1/1‑71 (MQ=255)
                                                                                 aCCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtcc                                                                      >  2:3865970‑M1/1‑69 (MQ=255)
                                                                                  ccAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccg                                                                     >  1:8069584‑M1/1‑68 (MQ=255)
                                                                                  ccAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccg                                                                     <  1:8734002‑M1/150‑83 (MQ=255)
                                                                                    aGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggacgtccgcg                                                                   >  2:8605611‑M1/1‑66 (MQ=255)
                                                                                    aGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcg                                                                   >  1:1112866‑M1/1‑66 (MQ=255)
                                                                                     gCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgc                                                                  >  1:748843‑M1/1‑65 (MQ=255)
                                                                                        tCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgccca                                                               >  2:3359319‑M1/1‑62 (MQ=255)
                                                                                        tCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgccca                                                               <  2:3622178‑M1/150‑89 (MQ=255)
                                                                                          ggCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatc                                                             >  1:853970‑M1/1‑60 (MQ=255)
                                                                                           gCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcc                                                            <  1:1339783‑M1/150‑92 (MQ=255)
                                                                                               gTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgcc                                                        >  2:8123889‑M1/1‑55 (MQ=255)
                                                                                               gTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgcc                                                        <  2:2728224‑M1/150‑96 (MQ=255)
                                                                                                tACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgcca                                                       >  2:4026202‑M1/1‑54 (MQ=255)
                                                                                                   ttGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatac                                                    >  1:10062421‑M1/1‑51 (MQ=255)
                                                                                                     gcgcTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactc                                                  >  2:6089679‑M1/1‑49 (MQ=255)
                                                                                                      cgcTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactct                                                 >  1:5925074‑M1/1‑48 (MQ=255)
                                                                                                       gcTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactctt                                                >  1:2428150‑M1/1‑47 (MQ=255)
                                                                                                        cTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttc                                               <  1:185481‑M1/150‑105 (MQ=255)
                                                                                                         ttCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttcc                                              >  2:10006902‑M1/1‑45 (MQ=255)
                                                                                                          tCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccg                                             >  1:10427450‑M1/1‑44 (MQ=255)
                                                                                                                    gCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcga                                   >  2:4356178‑M1/1‑34 (MQ=255)
                                                                                                                     cTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaa                                  <  2:9292807‑M1/150‑118 (MQ=255)
                                                                                                                      tGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaac                                 >  1:4502681‑M1/1‑32 (MQ=255)
                                                                                                                      tGCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaac                                 <  2:6763334‑M1/150‑119 (MQ=255)
                                                                                                                       gCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaaca                                <  2:10657390‑M1/150‑120 (MQ=255)
                                                                                                                       gCCGTAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaaca                                <  1:5145287‑M1/150‑120 (MQ=255)
                                                                                                                           tAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagc                            <  2:6008184‑M1/150‑124 (MQ=255)
                                                                                                                           tAGTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagc                            >  2:2236448‑M1/1‑27 (MQ=255)
                                                                                                                           tAGTGGAGGATGTAGGGCGCAGCGATGtccgaaggcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagc                            <  2:2043815‑M1/150‑124 (MQ=255)
                                                                                                                             gTGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcacggtcaggccggcccgaccgatctcatcgatgaccacggcgcagtagaggaagtccgcgcccatcccgccatactcatccggcaggtgcgaacagagcag                          >  1:3002376‑M1/1‑25 (MQ=255)
                                                                                                                              tGGAGGATGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcatt                         <  1:5810867‑M1/150‑127 (MQ=255)
                                                                                                                               ggaggaTGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattc                        <  2:5713949‑M1/150‑128 (MQ=255)
                                                                                                                               ggaggaTGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattc                        >  1:6270162‑M1/1‑23 (MQ=255)
                                                                                                                               ggaggaTGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattc                        >  2:2357325‑M1/1‑23 (MQ=255)
                                                                                                                                  ggaTGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccgg                     <  2:7130218‑M1/150‑131 (MQ=255)
                                                                                                                                    aTGTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcc                   >  2:8318797‑M1/1‑18 (MQ=255)
                                                                                                                                     tGTAGGGCGCAGCGATGtcggaatggagggagaacccgataccggtcaggccggaccgcacgatctcttcgatgcccccggcgatgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcct                  >  2:7240482‑M1/1‑17 (MQ=255)
                                                                                                                                      gTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcctc                 >  2:1434283‑M1/1‑16 (MQ=255)
                                                                                                                                      gTAGGGCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcctc                 >  2:447957‑M1/1‑16 (MQ=255)
                                                                                                                                         gggCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcctcgcc              <  2:6385984‑M1/150‑138 (MQ=255)
                                                                                                                                          ggCGCAGCGATGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcctcgccg             >  1:3742075‑M1/1‑12 (MQ=255)
                                                                                                                                                 cGAGGtccgactgcagggagaaaccgatcccggtcaggccggcccgcccgatctcttcgatgaccacggcgctggagaggaagtccgcgcccatcccgccagactcttccggcaggtgcgaacagagcattccggcctcgccggccttgt      <  2:5540206‑M1/150‑146 (MQ=255)
                                                                                                                                                   aTGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgacaacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattcaggcctcgccggcctagttc    >  2:8695844‑M1/1‑3 (MQ=255)
                                                                                                                                                    tGtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcctcgccggccttgttcc   >  2:2814250‑M1/1‑2 (MQ=255)
                                                                                                                                                     gtccgaatgcagggagaaaccgatcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcattccggcctcgccggccttgttcca  <  1:10156240‑M1/150‑150 (MQ=255)
                                                                                                                                                     gtccgaatgcagggagaaaccgagcccggtcaggccggcccgaccgatctcttcgatgaccacggcgctgtagaggaagtccgcgcccatcccgccatactcttccggcaggtgcgaacagagcagtccggcctcgccggccttgttcca  <  2:3255223‑M1/150‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCGCCGTGGTCTTCACCCCTTGCAGGTCGGAACCGGCCCCCGGCTCGGTCATGGCGATGGCCGCGACCATCTCGCCGGATACCAGCTTCGGCAGGTACTTGCGCTTCAGCGCCTCGCTGCCGTAGTGGAGGATGTAGGGCGCAGCGATGGCGCAGCGATGTCCGAATGTAGGGCGCAGCGATGTCCGAATGCAGGGAGAAACCGATCCCGGTCAGGCCGGCCCGACCGATCTCTTCGATGACCACGGCGCTGTAGAGGAAGTCCGCGCCCATCCCGCCATACTCTTCCGGCAGGTGCG  >  NC_008463/5131579‑5131877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.