Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 5,910,256 | 0 | A | C | 27.4% | 582.9 / 44.0 | 280 | intergenic (+55/‑90) | aceE/aceF | pyruvate dehydrogenase (acetyl‑transferring), homodimeric type/dihydrolipoyllysine‑residue acetyltransferase |
Reads supporting (aligned to +/- strand): ref base A (137/64); new base C (1/75); total (138/142) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.40e-27 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 291 total aligned reads displayed.
TGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAGCTG > NC_008463/5910107‑5910405 | tGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCaa < 1:9784535/150‑1 (MQ=255) ggCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAc < 2:8501730/150‑1 (MQ=255) gCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGCTCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑g < 1:6578421/150‑1 (MQ=255) gCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑g < 1:9307417/150‑1 (MQ=255) gCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑g < 2:9135670/150‑1 (MQ=255) cGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑ggg < 1:167648/150‑1 (MQ=255) cGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑ggg < 1:4678239/150‑1 (MQ=255) gATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑Ggg‑c < 2:6843422/150‑1 (MQ=255) tCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑Ggg‑cgg > 2:2501410/1‑150 (MQ=255) tCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑Ggg‑cgg > 2:836315/1‑150 (MQ=255) cggcgATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGgcgc > 2:1496935/1‑150 (MQ=255) tatCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTc > 2:4189962/1‑150 (MQ=255) atCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑CGG‑CGGCGCCGGCGca > 1:627200/1‑150 (MQ=255) atCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑CGG‑CCGCGCCGGCTca > 1:2346447/1‑150 (MQ=255) aGCCGAACGTGGTGGCGGTGGCCTTCGCCACGTACGGTATCGTTCCGGTTACGCCCAACCGGCTGTTTGGCTAATTCGCTCCAGCCGCCCCTGGGCAGCGAGGGGGTTCGACCACGCGGGCGCCGCCACC‑GGG‑CGGCGCCGGCTCACAAc < 2:6934422/150‑1 (MQ=255) ccGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCCCCGCCCAC‑GGG‑CGGCGCCGGCGAACAACGa > 1:2180707/1‑150 (MQ=255) ccGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGAGTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGa > 2:10393888/1‑150 (MQ=255) aaaGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAAcc > 2:2622908/1‑150 (MQ=255) aaaGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑CGG‑CGGCGCCGGCTcacacagaaac > 1:13986/1‑143 (MQ=255) gggtgcCCGTGGCCATCTCAATTTCCGGTATCTATCCGGAGATGCTAACCCCGGTGTTTTGATAATTCGCTCAATACTCCCCTCGGCTGGGTGGGTTTTCTCCCACGCGGGCGCCGCAACC‑GGG‑GGGCGCCGGCTCACAACGAACCAAgg < 2:5017838/149‑1 (MQ=255) ggtggCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCGCACAACGAACCAAGGa > 2:388918/1‑150 (MQ=255) ccGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCaaa > 1:6625574/1‑150 (MQ=255) aGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑CGG‑CGGCGCCGGCTCACAACCAACCAATGACCaaactt > 1:9164927/1‑147 (MQ=255) ccAACGCCTTGTACGGTAAGGATCCGGCCAAGCCCAACCCTCTGTTTTGCAAATTCGCTCATTACTCCCCGCGGCCGCTAGGGGTTTCGCGCACGCCGGCGCCCCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCtt < 2:9451445/150‑1 (MQ=255) cGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGtt > 2:4374587/1‑150 (MQ=255) ccAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCCAGGACCAAAAGTCTTTGtttt > 2:6612872/1‑150 (MQ=255) aaGAACGGTACGGATCGGGAGATGCCAAACCCGCTGTATTCATAATTCGCTCCATACGCCCCTGGGCAGCGTGGTGTTTCGACCCCGCGGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTgc < 2:7111153/150‑1 (MQ=255) tACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTATTTGTTTTtcgcg > 2:445501/1‑150 (MQ=255) cGGTATCGACCCGGAGACGCGCAACCCGCTGGTTTGCTAATTCGCTCAATCCGCCCCCCGGCAGCGTGGGGTTTCGCGCACGCCGGCGCCGCCACC‑GGG‑CGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGcgcc < 2:4078688/150‑1 (MQ=255) ggTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGcgccg > 2:7969844/1‑150 (MQ=255) ggTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAA‑CGG‑CGGCCCCCGCTAACAACGAACCAAGGAACCAAAGTATTTTTTTTTCGcgccc > 1:3367892/1‑149 (MQ=255) ttCGATCCGGAGACGCGCAACCCGGTGGTTTGCTAATGCGCTCCATCCTCCCCTCGGCTGGGTGGGGTTTCGCGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAACAGTCTTTGTTTTGCGCGCCGcac < 2:2346158/149‑1 (MQ=255) aTCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑GGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGcac > 1:8602217/1‑150 (MQ=255) tCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTGTTTGGTTTGCGCGCCGcaca > 2:5257818/1‑150 (MQ=255) gcGATCCTGAGACGCGCACCCCGCTGGATTGCTAATGCGCTCCATACTCCCCGCGCCAGCGCGGGGTTTCCAGCCCGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGcaca < 2:9580771/149‑1 (MQ=255) taTCGGGAGACGCGAAACCCGCTGGATTGCTAATTCGCTCAATCCGCCCCTCGCCAGCGTGGGTTTTCGCGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGc < 2:10422637/149‑1 (MQ=255) aTCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCAC‑GGG‑CGGCGCCGGCGCACAACCAAACAAGGACCCAAAGTCTTTGTTTTTCGCGCCGCCCAGCg > 1:4280422/1‑150 (MQ=255) gcggcagaCGCGCACCCCCCTGGTGTCCTAATTCCCGCCACACCCCCCGGGGCTGCGTGGGGTTTCGCGCACGCCGGCGCCGCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCgg < 2:8927669/145‑1 (MQ=255) ccGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCggt > 2:8392178/1‑150 (MQ=255) cGGAGACGCCCACCCCGCGGGATTGATAATCCGCCCCATACTCCCCTCGGCAGCGTGGGGTTACGCGCCCGCCGGCCCCGCCACG‑GGG‑CGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCggtg < 1:7464196/150‑1 (MQ=255) cGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAAACAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGAggtg > 2:284234/1‑150 (MQ=255) ggAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTGTTTGTTTTGCGCGCCGCACAGCggtgg > 1:9712212/1‑150 (MQ=255) gacccgaaaCCCGCTGGATTGCTACTTCGCTCCACACCCCCCGCGGCAGGGTGGGGTAGCGCGCCCGCCGGCGCCGCCACG‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGtggtgg < 2:8515686/143‑1 (MQ=255) gcccaccccGCTGTATCGCTAATGCCCCCCCACCCCCCCCGGGCAGCGTGGGGTTTCCCGCCCGCCGGCGCCCCCCCG‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCACAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCAc < 1:6858244/144‑1 (MQ=255) ccAACCCGCTGGATTGCAAATGCGCACAACACTCCCCTCGGCAGCGTGGGGTTTCGAGCACGCCGCCGCCGCCACC‑GGG‑CGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGt < 2:9933451/149‑1 (MQ=255) cAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGGCGCCCAC‑CGG‑CGGCGCCCGCGCACCACCAACCCAGGACCCAAAGTCTTTGTGTTGGGCGCCGCCCCGCGGgggtggggcggt > 1:10259853/1‑144 (MQ=255) cAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑CGG‑CGGGGCCGGCACAAAAAGAAACAAGGACCAAAATTGGTTGTTTTGCGCGCCGCACAGCGGgggtgggccggt > 2:5605884/1‑144 (MQ=255) cccGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTATTTGTTTTGCGCGCCGCACCGCGGTGGTGGGCCGGaaaa > 1:8009336/1‑150 (MQ=255) ccGCTGTTTTGCTAATGCGCACAATCCCCCCCTCGGCCGCGCGGGGTTGCGAGCCCGCCGGCGCCGCCACC‑GGG‑GGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAg < 2:2042566/150‑1 (MQ=255) ccGCTGGTTTGATATTACCCACAATCCCCCCCTCGGCTGGGTGGGTTTCCGAGCACGCCGGCCCCCCCACG‑GGG‑GGCCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAg < 1:1342228/150‑1 (MQ=255) ccGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGCACCAAGGAACCAAAGTGTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAg > 2:8981265/1‑150 (MQ=255) gCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTTGGACGGAAAATga > 2:7218485/1‑150 (MQ=255) tttGCTAATTCGCACCATACTCCCCTCGGCAGCGAGGGTTTTCGAGCACGCCGGCGCCGCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGa < 2:6546525/149‑1 (MQ=255) aTTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACCACGAAACAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACCGCGGTGGTGGCACGTAAAAGGAGAGGa > 2:9333824/1‑150 (MQ=255) tGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAATTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGGAAAAGGAGAGGAAt > 2:6069544/1‑150 (MQ=255) gCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCAC‑CGG‑GGGCGGCGGCACACAAACAAACCAGGTACAAAAGTAATTGTTTTGCGCGGCGCACAGCGGGGGTGGGACGTGATAGGGGTGGGAtg > 1:3002601/1‑150 (MQ=255) tAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGGTCACAACGAACCCAGGTCCAAAAGGGGTTGTTTTTCGCGCCGCACAGCGGGGGGGGGAGGTAGAAGGAGAGGAAtgtg > 1:5616618/1‑150 (MQ=255) aaTTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑CGG‑CGGCGCCGGCTCACAACGAACCAAGGGCCCAAATTCTTTTTTTTGCGCGGCCCACAGCGGTGGTGGCACGGAAAAGGAGAGGACtgtgg > 1:5848387/1‑149 (MQ=255) aaTTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCACC‑CGG‑CGGCGCCGGCTCCCAACGAACCAAGGACCAAAAGTCTATGTTTTGCGCGCCGCACAGCGGGGGTGGCACGTCAAAGGAGAGGAAtgtgt > 2:5001884/1‑149 (MQ=255) aTTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGTCCAAAAGTCTTTGTTTTGCGCGCCGCACCGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAg > 1:8821711/1‑150 (MQ=255) aTTCGCTCCATACCCCCCTGGGCTGCGTGGGGTTTCGCCCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAg < 2:7631184/150‑1 (MQ=255) ttCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGc > 2:10439809/1‑150 (MQ=255) tgcGCCCCAGACTCCCCTCGGCCGCGAGGGGTTCCGCGCACGCCGGCGCCCCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGc < 2:4876960/148‑1 (MQ=255) cGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCGCACAACGAACCAAGGTCCAAAAGTCTTTGTTTTGCGCGCCCCACAGCGGTGGTGGCACGGAAAAGGGGAGGACAGTGTGCGa > 2:2812505/1‑150 (MQ=255) ccccACACACCCCGCGGCCGCGTGGGTTTCCGCCCCCGCCGGCGCCCCAATC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAAc < 2:3665910/148‑1 (MQ=255) catccgccccTGGGCTGCGTGGGTTTTCGAGCACCCCGGCGCCGACACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCa < 2:9667883/144‑1 (MQ=255) cATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACCGCGGTGGTGGCCCGTAAAAGGAGAGGAATGTGAGCGTACtaa > 2:7689956/1‑148 (MQ=255) aCTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑GGGGGCCGGCTCACAACGAACCAAAGACCAAAAGTCTTTGTTTTGCGCGGCGCACAGCGGTGGTGGCACGTGAAAGGAGAGGGCTGTGAGCGAACTCATTc > 1:7890430/1‑150 (MQ=255) ccccTCGGCCGCGCGGGGTTTCGCCCCCGCCGGCGCCGCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTcgcg < 2:1618018/150‑1 (MQ=255) gCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGTATGTGAGCGTACACAATAGCGTACCCGa > 2:3229259/1‑150 (MQ=255) ccAGCGTGGGGTTTCCCCCCCCCCGGCGCCCCCCCG‑GGG‑CGGCCCCGGCTCACACCGAACCAAGGCCCAAAAGTCTTTGTATTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGa < 1:4072663/149‑1 (MQ=255) cAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAAAGAAACAAGGACCAAAAGTATTTGTTTTTCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGAc > 2:1141343/1‑150 (MQ=255) cgCGGGGGGTTACGAGCACGCCGGCGCCGCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACa < 2:3279819/149‑1 (MQ=255) gcgcGGGGTTTCGCCCCCGCCGGCGCCGCCACC‑GGG‑CGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACAt < 2:5889454/150‑1 (MQ=255) gtgggtTTTCGACCACGCGGGCGCCCCCACC‑GGG‑CGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCg < 1:4974459/148‑1 (MQ=255) gAGGGGTTCCGAGCACGCGGGCGCCGCACCG‑GGG‑GGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCg < 2:1813628/150‑1 (MQ=255) cggggTTTCGCCCACGCCGCCGCCGCCCAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCgg < 2:8014772/149‑1 (MQ=255) cggggTTGCGCCCACGCCGGCCCCGCCACG‑GGG‑GGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCgg < 1:8477629/149‑1 (MQ=255) ggggTTGCGAGCCCGCCGGCGCCCCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGc < 2:2288605/150‑1 (MQ=255) ggTTTCGACCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCaa < 2:7553103/150‑1 (MQ=255) ggTTCCGACCCCGCCGCCCCCCCCACG‑GGG‑CGCCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCaa < 1:8996309/150‑1 (MQ=255) gTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCCAAAGTCTTTGTTTTGCGCGCCGCCCAGCGGGGGTGGCACGGAAAAGGAGAGGAATGTGAGCGAACGCATTCGCGTACCCGACCTCGGCCAc > 2:6700450/1‑150 (MQ=255) tttCGAGCACGCCGGGGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAACGACCAAAAGTCTTTGTTTTTCGCGCCCCCCAGCGGTGGGGGCACGTAAAAGGAGAGGTAAGTGTGCGACCACAATCGCGTACCCGACATCGGCAACg > 2:3605688/1‑150 (MQ=255) ttCGACCACGCCGGCGCCGCCACG‑GGG‑GGGGGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACgg < 2:8760082/150‑1 (MQ=255) cGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTg < 2:2139030/150‑1 (MQ=255) gcgcccGCCGGC‑CCCCCAACGGGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGa < 1:457134/145‑1 (MQ=255) gaccACGCGGCCGCCCCCACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGa < 2:9808517/147‑1 (MQ=255) cccccccccGGCCCCCCCACC‑GGC‑GGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGa < 1:3567999/143‑1 (MQ=255) cccccGCCGGCCCCGCCACC‑GGC‑CGGCGCCGGCTCACACCGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAg < 1:2743707/146‑1 (MQ=255) cccACGCGGGCGCCGCCACC‑GGG‑GGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAg < 1:175763/148‑1 (MQ=255) gcgggCGCCGCCATC‑GGG‑GGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGa < 2:3065314/147‑1 (MQ=255) ccgcgcCGCCAAC‑GCG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCTGCAACGGTGAGGGTGAAg < 2:1300510/148‑1 (MQ=255) cGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAg > 2:8245473/1‑150 (MQ=255) ggCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCCACGGTGGGGGGGAAgg > 2:10689741/1‑149 (MQ=255) gcgcCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTACAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTc > 1:94450/1‑150 (MQ=255) ccgccAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATc > 2:4549871/1‑150 (MQ=255) ccACC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAg < 2:8112740/150‑1 (MQ=255) cAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAgc > 1:10052985/1‑150 (MQ=255) aaC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAgct > 1:5433037/1‑150 (MQ=255) aC‑GGGCCGGCCCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAgct < 1:3698708/150‑1 (MQ=255) | TGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGG‑CGGCGCCGGCTCACAACGAACCAAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAGCTG > NC_008463/5910107‑5910405 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |