Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 6,352,993 | 0 | A | T | 26.3% | 864.6 / 67.8 | 377 | intergenic (+73/‑46) | dgcB/PA14_RS29035 | dimethylglycine demethylation protein DgcB/electron transfer flavoprotein subunit alpha/FixB family protein |
Reads supporting (aligned to +/- strand): ref base A (204/65); new base T (0/96); total (206/171) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.41e-45 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 396 total aligned reads displayed.
GGAAGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAGGTGCG > NC_008463/6352845‑6353142 | ggAAGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCagggag < 2:3045817/150‑1 (MQ=255) aaGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCagggaggg > 1:8954674/1‑150 (MQ=255) aGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAgggg < 1:3010201/150‑1 (MQ=255) aGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAgggg < 1:10666924/150‑1 (MQ=255) aGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGGGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCACCAGGGAgggg < 2:9028864/150‑1 (MQ=255) cgcTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGc < 1:5963818/150‑1 (MQ=255) gcTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGcc < 2:6819082/150‑1 (MQ=255) gcTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGcc < 1:437609/150‑1 (MQ=255) gcTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGcc < 1:170661/150‑1 (MQ=255) tGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCcgc > 2:9603915/1‑150 (MQ=255) gagCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGAc > 1:5586217/1‑150 (MQ=255) agCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGAcc > 2:8978005/1‑150 (MQ=255) agCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGAcc > 1:1465212/1‑150 (MQ=255) agCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGAcc > 2:4422421/1‑150 (MQ=255) gctggCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGATTCACATCGAATCCGCTGCTGACCGGGGCAGAACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCg < 2:2142008/147‑1 (MQ=255) gCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCg > 2:6311521/1‑150 (MQ=255) ggCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGt > 1:2543748/1‑150 (MQ=255) ggAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGc > 1:7977340/1‑150 (MQ=255) aaGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCg > 1:6906019/1‑150 (MQ=255) aaGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCg > 1:6536408/1‑150 (MQ=255) cgcgcCGGCAAAAACGCGGGTGCGGCGTGACGCGGGGGCGGCGGTGAATTGATGAGCGGGTCGAGCTTCACACCGAAGCCGCTGCTCCCGGGGGCAGCACGGATCGCGGCCTCCCCCCCCAGGGCGGGGGCCGCGGGACCGGGTAGCCGc < 2:9873104/149‑1 (MQ=255) aGCGCCGGAAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGAATTGATGAGAGTGTCGAGCTTCACAACGAATCCGCTGATGACCGTGGCAGCACGGATATCGGCCTCTCACTCCATGTAGCGGACCGCGGGACCGTTTAGCCGc > 1:3618958/1‑150 (MQ=255) gcCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGc > 1:10019262/1‑150 (MQ=255) cGGCCAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGCGGTGCAGTGATGAGAGTGTCGAGCTTCACAGCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCGAGGGCGGGGGCCGCGGGACCGGGTGGCCGCAGCca > 2:2448922/1‑150 (MQ=255) cGGCAAAAAAGCCGGTGCGGCGTGATGCCGTGGGGGCGGTGCTTTGATGAGCGTTTCGAGCTACACATCTAATCCGCTGGTGACCGGGGCAGCACGCATAGCGGCCGCTCCCTCCCGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCca < 2:7452216/150‑1 (MQ=255) aaaaGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCTGCCACAGGaa > 1:2672380/1‑150 (MQ=255) aaaGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAg > 1:831706/1‑150 (MQ=255) aaaCCCGGTGCGGCGTGACGCCGTGGGGGTGGTGCATTGATGAGCGTGCCGAGCTTCACAGCGAATCCGCTGCTGACGGGGGCAGCACGGATTGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAg < 2:4367422/150‑1 (MQ=255) gCCGGTGCGGCGTGACGCGGTGGCGGTGGTGAATTGAGGTGTGTGTGTCGGTTCCCATCGATTCCGCTGCTTACCGGGGCAGAACGTATAGCGGCCTCTCCCTCCTGGTAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCAt < 2:10217681/150‑1 (MQ=255) ccGGTGCGGCGTGACGCCGTGGGGGTGGTGCATGTATGCGTGTGTCGCGCTTCACCTCGAATCCGCTGCTGCCGGGGGCAGCACGGTTCGCGGCCTCGCCCTCCTGGGTGGGGGCCCCGGGACCGGGTAGCCGCAGCCACAGGAAGCAtt < 2:3263693/150‑1 (MQ=255) cGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTc > 1:2187501/1‑150 (MQ=255) ggTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTcc > 2:595939/1‑150 (MQ=255) ggTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTcc > 1:1135354/1‑150 (MQ=255) tGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGc > 1:6331008/1‑150 (MQ=255) gcggcgTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCa > 2:7938535/1‑150 (MQ=255) gggcgTGAAGCCGTGGCGGAGGTGCTTTGATGAGAGTGTCGAGCTTCACAGCGAATCCGCTGCTGACCGGGGCAGCACGGATCGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCAt < 2:10365503/149‑1 (MQ=255) cggcgTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCGCAGGAAGCCTGCCGCag > 2:7264382/1‑149 (MQ=255) gcgTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGa > 2:1768027/1‑150 (MQ=255) cgTGAAGCCGTGGCGGAGGTGCTTTGATGAGTGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCGCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGaa < 2:468381/150‑1 (MQ=255) gttatgCCGTGGGGGAGGTGATTTGATGTGAGTGTCGAGCTTCACATCTAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAAc < 2:7040747/145‑1 (MQ=255) gTGAAGCGGTGGGGGAGGTGAATTTTTGATTGTTTGTAGATACACTTCTAATCCGCTGCTGCCGGGGGCAGCACGTATAGCGGCCTCTCCCTCCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAAc < 1:7068786/150‑1 (MQ=255) gTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAAc > 1:336110/1‑150 (MQ=255) gTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAAc > 1:8906768/1‑150 (MQ=255) tGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACg > 2:5664906/1‑150 (MQ=255) gctgcggTGGCGGAGGTGCATTGATGACCGTGTCGAGATACACCCCGATTCCGCTGCGGCCCGGGGCTCCCCGGATTGGGGCAGCACCCTCCCGGGTGGGGGCCCCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGa < 2:338298/144‑1 (MQ=255) aaGCCGTGGCGGTGTTGATTTGATGACAGGGACTAGATACACATCCAATCCGCTGCGGCCCGGGGCACCACGTATCGCGGCCCCCCCCCCCCGGGTGGGGCCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGAc < 1:5725601/150‑1 (MQ=255) aaGCCGTGGCGGAGGTGCTTTGATGAGTGTGTCGCGCTTCACAACGAAGCCGGTGCTGACGGGGGCAGCACGGATAGCGGCCTCTCCCACCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGAc < 2:1404399/150‑1 (MQ=255) aGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACa > 2:4208375/1‑150 (MQ=255) ccGTGGCGGAGGTGCATTTATGAGAGTGTCGCGATTCACAGCGAAACCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATc < 2:10079963/150‑1 (MQ=255) tGGCGGAGGTGCAGTGTTGAGAGTGTCGCGATACACATCGAAGCCGCTGCTCCCGGGGGCTGCCGGGATAGCGCCCACGCCCGCCCGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtc < 1:10408877/150‑1 (MQ=255) gggCGGTGGTGCTTTGTTGAGAGTGTCGCGCTTCACATCGATTCCGCTGCTGCCCGGGGCAGCCCGGATCGCGGCCCCTCCCTCCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtc < 2:358395/149‑1 (MQ=255) gCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccg > 2:5309019/1‑150 (MQ=255) ggtgttGCATGGATGTGTGGGGCGAGCTTCCCAGCGAATCCGCGGCTGACCGGGGCCGCAGGGATCGCGGCCTCTCCCTCCGGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccgtc < 2:7657494/145‑1 (MQ=255) ggAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccgtc > 1:4585900/1‑150 (MQ=255) ggAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccgtc > 2:35230/1‑150 (MQ=255) gtggTGAATTGTTTAGAGTTTCGTGCTGCACAGCTAATCCGCTGCTGCCGGGGGCAGCACGGTTAGCGGCCCCTCCCTCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTcg < 2:8350101/148‑1 (MQ=255) gAGGTGCTTTGATGAGAGTGTCGAGCTTCACATCTAATCCGGTGCTGCCCGGGGCAGCACGGATAGCGGCCTCTCCCGCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTcg < 2:9927430/150‑1 (MQ=255) aGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTcgc > 1:7694914/1‑150 (MQ=255) gTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGa > 2:8725283/1‑150 (MQ=255) ttgttgAGCGTGTCGTGATTCACATCGAATCCGCTGCTGACCGGGGCCGCAGGTTTTGCGGCCTCTCCCACCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCAc < 1:5234296/150‑1 (MQ=255) ttgtgtgtgtCGCGTTACACATCGAATCCGCTGCTGCCCGGGGCCGCCCGTTGAGCGGCCTCTCCCTCCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCAcgcg < 1:7434076/144‑1 (MQ=255) gagaGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCTGCACGGATAGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGcc < 2:9430092/150‑1 (MQ=255) gagTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGa > 2:9223941/1‑150 (MQ=255) gtgtCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAAt > 1:10574741/1‑150 (MQ=255) gggtctcgCTACACATCCACCCCGGTGCTGACCGGGGCCGCACGGATCGCGGCCTCGCCCTCAGGGGTGGGGCCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAAt < 1:4304880/143‑1 (MQ=255) gAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATc > 2:8166903/1‑150 (MQ=255) aGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCg > 1:1584383/1‑150 (MQ=255) aGCTTCAAATCTATTCCGGTGGTGCCGGGGGCCGCCGGGATGGGGCCCTCTCCCCCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCg < 1:1973449/150‑1 (MQ=255) gCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGc > 1:10259606/1‑150 (MQ=255) gCTACACATCGAAACCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCCGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGc < 2:2618967/150‑1 (MQ=255) tCACATCTAATCCGCTGCTGCCCGGGGCAGCACGTTTAGCGGCCTCCCCCCCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCg < 1:9736547/150‑1 (MQ=255) tCACATCGATTCCGCTGCTGACGGGGGCAGCACGTATAGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCg < 2:8523135/150‑1 (MQ=255) cacaTCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGc > 2:6504354/1‑150 (MQ=255) cttCGAATCCGCTGCGGCCCGGGGCAGCACGGTTAGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCaa < 2:8877136/148‑1 (MQ=255) ctaaTCCGCTGCTGCCGGGGGCCGCAGGTATCGCGGCCTCCCCCTCCTGGTTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCg < 1:10479821/148‑1 (MQ=255) aaTCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGcc < 2:3772586/150‑1 (MQ=255) aTCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCt > 1:4731112/1‑150 (MQ=255) tCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATGCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTg > 1:10204451/1‑150 (MQ=255) cGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCa > 1:5090467/1‑150 (MQ=255) cGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCa > 1:5541095/1‑150 (MQ=255) gctgACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGAGCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCg > 2:7361325/1‑150 (MQ=255) cggACCGGGGCCCCTCTGATCGCGGCCCCCCCCCCCGGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGc < 1:2313831/148‑1 (MQ=255) tgACCGGGGCAGCAGGTATCGCGGCCTCACCCACCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCt < 2:120175/150‑1 (MQ=255) cccGGGGCAGCACGGATAGCGGCCTCACCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGc < 1:8619978/149‑1 (MQ=255) aCCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGc > 2:5094726/1‑150 (MQ=255) ccGGGGCAGCACGGATAGCGGCCTCTCCCCCCCGGGCGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCa < 2:9741174/150‑1 (MQ=255) ggggCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATg > 2:4803299/1‑150 (MQ=255) ggggCACCACGGATCGGGGCCTCACCCGCCCGTGTGGGGGCCCCGGGACCGGGTAGCCGCAGCCACAGGAAGCAGTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATg < 1:9196324/150‑1 (MQ=255) cgccgggATAGCGGCCTCTCCCGCCTGGGTGGGGCCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGcc < 1:3865144/145‑1 (MQ=255) gcaCGTATCGCGGCCTCCCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCa < 1:9588005/150‑1 (MQ=255) gcaCGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCa > 2:9288829/1‑150 (MQ=255) caCGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGCCATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCAt > 2:6151142/1‑150 (MQ=255) gactgCGGCCTCACCCTCCTGGGTGGGGGCCCCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCAc < 1:4974529/146‑1 (MQ=255) tcgCGGCCCCCCCCCCCTGGGTGGGGGCCCCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTc < 1:537673/148‑1 (MQ=255) ctccctccAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAgg > 2:5519401/1‑150 (MQ=255) cccccccAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAggc < 1:6667546/149‑1 (MQ=255) ccctccAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAggcg < 2:7483993/150‑1 (MQ=255) ccctccAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGACCGTCGCGAACCACGCGACGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAggcg > 2:7521285/1‑150 (MQ=255) cAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAg > 2:4054636/1‑150 (MQ=255) agggagggGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAgg > 2:1637329/1‑150 (MQ=255) | GGAAGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAGGTGCG > NC_008463/6352845‑6353142 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |