Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 3,515,863 T→C intergenic (+617/+267) PA14_RS16005 → / ← PA14_RS16010 AAA family ATPase/DUF4354 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,515,8630TC99.6% 990.6 / NA 266intergenic (+617/+267)PA14_RS16005/PA14_RS16010AAA family ATPase/DUF4354 family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (138/126);  minor base A (1/0);  total (140/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 266 total aligned reads displayed.

TATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAA  >  NC_008463/3515716‑3516009
                                                                                                                                                    |                                                                                                                                                   
 ataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCa                                                                                                                                                  <  1:4131961/150‑1 (MQ=255)
 ataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCa                                                                                                                                                  <  2:5444341/150‑1 (MQ=255)
  taCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGCCCTCAc                                                                                                                                                 >  1:3379305/1‑150 (MQ=255)
     aGCCCCTCCCTACGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAcccc                                                                                                                                              <  1:6191980/150‑1 (MQ=255)
      gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGCCCTCACCCCa                                                                                                                                             >  2:3174103/1‑150 (MQ=255)
      gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTATTGGAATGTGGTGTTGGCCCTCACCCCa                                                                                                                                             >  2:386657/1‑150 (MQ=255)
       ccccTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCaa                                                                                                                                            >  2:184056/1‑150 (MQ=255)
        ccctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAc                                                                                                                                           <  2:5482695/150‑1 (MQ=255)
        ccctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCaaa                                                                                                                                           >  1:5614066/1‑149 (MQ=255)
          ctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACaacccaaccc                                                                                                                                         >  1:9162744/1‑150 (MQ=255)
          ctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAccc                                                                                                                                         >  2:2327183/1‑150 (MQ=255)
              ctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCtctc                                                                                                                                    <  1:10354059/150‑1 (MQ=255)
               tAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACCCCCCAACCCACTcc                                                                                                                                   >  2:7010899/1‑150 (MQ=255)
                     aTAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGCCCACACCCCAAACCACAcccccccg                                                                                                                             >  2:786792/1‑145 (MQ=255)
                      tAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCTCAACCTCCCCCGCTGCTAACCGCACTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAACCCACTCCCCCCcgc                                                                                                                            >  1:3532672/1‑150 (MQ=255)
                         cccTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTAACCCCAACCCTCTCCCGCACGCggg                                                                                                                         >  2:8642261/1‑150 (MQ=255)
                          ccTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGga                                                                                                                        <  1:10679095/150‑1 (MQ=255)
                             tCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACAACCCAACCCACACCCCCACGCggggggg                                                                                                                     >  2:5202757/1‑146 (MQ=255)
                              ccccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCAACCCCCACCCGCACGCgggggggg                                                                                                                    >  1:2074401/1‑145 (MQ=255)
                              ccccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACCCCCCAACCCACACCCGCCCGCGGGGGAgg                                                                                                                    >  1:8247193/1‑150 (MQ=255)
                              ccccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAgg                                                                                                                    <  2:9506935/150‑1 (MQ=255)
                               cccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACCCCCCAACCCACTACCCCACGCGGGGGAggg                                                                                                                   >  2:278095/1‑150 (MQ=255)
                               cccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAAACACAACCGCACGCGGGTGAggg                                                                                                                   >  1:9764099/1‑150 (MQ=255)
                                    aCCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCGCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAAGGTGGTGTTGGCCCTCACCCCTACCCTCTCCCGCACGCGGGAGAGGGGGCCg                                                                                                              <  2:8799271/150‑1 (MQ=255)
                                     ccTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCCCCCCAACCCGCTACCCCACCCGGGGGAGGGGGGCgg                                                                                                             >  2:5242732/1‑150 (MQ=255)
                                       tGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACTCCCGCACGCGGGAGAGGGGGCCGGGc                                                                                                           >  2:1334481/1‑150 (MQ=255)
                                            ggCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCCAACCTCTCCCCCACGCGGGCGAGGGGGGCGGGGGTggc                                                                                                      >  1:95307/1‑148 (MQ=255)
                                             gCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAACCCCCCACCCACACCCCCACCCGGGGGAGGGGGCCggggggggcg                                                                                                     >  1:6035374/1‑143 (MQ=255)
                                              cacaCCTCTGGCCACCCGCAACACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCtt                                                                                                    <  1:778969/150‑1 (MQ=255)
                                                cacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACTCCCCCACGCGGGGGTGGGGGCCGGGCGTGCCAtgt                                                                                                  >  2:10158109/1‑150 (MQ=255)
                                                 acCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTtgtg                                                                                                 <  1:3286091/150‑1 (MQ=255)
                                                  ccTATTGCCACCCGCACACCCCCACCCTCCCCCGCTGCTAACCGCAAGAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTgg                                                                                                <  1:6798476/150‑1 (MQ=255)
                                                    tATTGCCACCCGCAAAACCACACCCTCCCCCGCTGCTACCCGAATTAGCTGCGGCTTGTGTGTCGCGTTTCGGTTTTTGGATTGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGGGGTATTGGGGGCGGGGCGTGCCTTGTGGGt                                                                                              <  2:2685339/150‑1 (MQ=255)
                                                     cttGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTGTTGGAATGTGGTGTTGGCCCTCACCCCCTCCCTCGCCCGCACGCGGGGGCGGGGGCCGGGGGGGCCGGGTggggc                                                                                             >  2:197241/2‑148 (MQ=255)
                                                     agtGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTc                                                                                             <  1:5578270/148‑1 (MQ=255)
                                                     aTTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAACACCCAAACCCCACCCCCACGCGGGAGAGGGGGGCCGGCGTGCCGTGTGGGTc                                                                                             >  2:10702755/1‑150 (MQ=255)
                                                      ttGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCg                                                                                            <  1:8120628/150‑1 (MQ=255)
                                                        gCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTATCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCgtg                                                                                          >  2:6859652/1‑148 (MQ=255)
                                                           aCCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAgcgc                                                                                       <  1:7458764/150‑1 (MQ=255)
                                                            cccGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCACACCCGCACGCGGGAGAGGGGGCCGGGCGTGCCATGTGGGTCGAGCGcc                                                                                      >  2:2219675/1‑150 (MQ=255)
                                                             ccGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCct                                                                                     <  2:3160220/150‑1 (MQ=255)
                                                              cGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACACCCGCACGCGGGTGTGGGGGGCGGGCGTGCCATGTGGGTCGAGCGCctc                                                                                    >  1:7928827/1‑150 (MQ=255)
                                                               gCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCCACCCACGCCCCCCCCCCGGCCAGGGGGGCGGGCGGGGCGTGGGGGTAGGGCGCctcg                                                                                   >  2:8309912/1‑150 (MQ=255)
                                                                   aaCCCCAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctcg                                                                               <  1:2231980/150‑1 (MQ=255)
                                                                   aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCCCCCCAAACCACAACCCCCACCGGGGGGGGGGGGCGGGCGGGGGGGGTGGGTGGGGCGCcccgcgcg                                                                               >  1:3900178/1‑150 (MQ=255)
                                                                   aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCACCCCAACCCACACCCCCACGCGGGGGAGGGGGGCGGGGGGGGCGTGTGGGGCGAGCGCcacgctcg                                                                               >  1:10086398/1‑150 (MQ=255)
                                                                   aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctcg                                                                               <  2:366470/150‑1 (MQ=255)
                                                                     ccACACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGATTGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCggg                                                                             <  2:4489575/150‑1 (MQ=255)
                                                                     ccACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCGCTACCGCACGCGGGTGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCGCggg                                                                             >  2:7375522/1‑150 (MQ=255)
                                                                        caACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCCAACCTCTACCGCACGCCGGTGTGGGGGGCGGGCGTGGCGGGTGGGGCGAGCGCCGCGCGCGGgggc                                                                          >  2:9811986/1‑150 (MQ=255)
                                                                        caACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCAACCCCAAACCAAACCCCCGCCCGGGGGTGGGGGGGGGGGGTGGCGTGTTGGGGGGGCCCCACGCACGGgcgc                                                                          >  1:8862919/1‑150 (MQ=255)
                                                                        caACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgcgc                                                                          <  1:2690406/150‑1 (MQ=255)
                                                                         aaCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCa                                                                         <  1:6665572/150‑1 (MQ=255)
                                                                           ccTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCCAACCACACCCGCCCGCGGGAGAGGGGGGCGGGCGTGGCGTTTGGGGCGAGCGCCACGCGCGGGCGCAGc                                                                       >  1:8502310/1‑150 (MQ=255)
                                                                            cTCCCCCGCTGCTACCCGCAATAGATGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGTGCGCAGcc                                                                      <  2:4970147/150‑1 (MQ=255)
                                                                              cccccGCTGCTAACCGCAATAGCTGCGGCGTGAGTGTCGCGGATCGGTTTGTGGAATGTGGTGTTGGGCCGACCCCCAACCCTCTCCCCCCAGCGGGAGAGGGGGGCGGGCGGGGCGGGGGGGTCGGGCGCCTCGCTCGGGCCGAGccgg                                                                    >  2:10424409/1‑148 (MQ=255)
                                                                               ccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTgg                                                                   <  1:3944883/150‑1 (MQ=255)
                                                                               ccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAACCACAACCCCACCCGGGGGAGGGGGCCGGGCGTGCCGAGTGGGTCGAGCGCCTCGCGCGGGCGCAGCCAgg                                                                   >  2:8475309/1‑150 (MQ=255)
                                                                                cccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGa                                                                  <  2:4159472/150‑1 (MQ=255)
                                                                                cccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGa                                                                  <  2:1641462/150‑1 (MQ=255)
                                                                                 ccGCTGCGAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGaa                                                                 <  2:8072462/150‑1 (MQ=255)
                                                                                    ctgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACCCCCCAAAACGAACCCGCACCCGGGCGAGGGGGGCGGGCGGGGCGGGTGGGTCGGGCGCCGCGCTCGGGCGCAACCGGGGACgg                                                              >  1:10417173/1‑149 (MQ=255)
                                                                                     tgctAACAGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGATTGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGAt                                                             <  1:7116710/150‑1 (MQ=255)
                                                                                         aaCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCt                                                         <  2:8865181/150‑1 (MQ=255)
                                                                                           ccGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTAc                                                       <  1:4746368/150‑1 (MQ=255)
                                                                                              cAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCAACCACAACCCCACCCCGGTGAGGGGGCCGGGCGTGCCCTTTGGGGGGAGCGCCCCCCGCCGGGGCACCCAGGGACCATTTCTAcccc                                                    >  1:8672563/1‑149 (MQ=255)
                                                                                              cAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCt                                                    <  2:5878125/150‑1 (MQ=255)
                                                                                               cagcgCTGCGGCCTGAGTGTCGCGGATCGGTTTTTTGAATGTGGTGTTGGCCCTCACCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCGCGCTCGGGCGCAGCCGGGAACGATGACTACCCTc                                                   <  2:1787359/146‑1 (MQ=255)
                                                                                               aaTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAACCCAAACCACTCCCCCAAGCGGGAGATGGGGCCGGGCGTTCCGTGTGGGTCGAGCGCCGAGCTAGGGCGCCGCCATGAACGATGTCTACCCTc                                                   >  2:7379000/1‑150 (MQ=255)
                                                                                                 tAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTccc                                                 <  1:10241238/150‑1 (MQ=255)
                                                                                                 tAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTccc                                                 <  2:1376480/150‑1 (MQ=255)
                                                                                                   gCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCt                                               <  1:8558634/150‑1 (MQ=255)
                                                                                                       cGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCCCACCCCCACCCAAACCCCCACCCGGGGGTGGGGGCCCGGCGTGCCGTGTGGGTCGAGCGCCACGCACGGGCGCAGCCGGGAACCATGTCAAACCACCCCAAGGc                                           >  2:6284798/1‑150 (MQ=255)
                                                                                                       cGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCAACCCACACCCCCAACCCGGTGAGGGGGGCGGGCGTGCCGTGTTGGTCGAGCGCCGCCCTCGGGCGCAGCCAGGAACGATTTCTACCCAccccaatgc                                           >  2:2591216/1‑145 (MQ=255)
                                                                                                          cTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAAACCTCAACCCCCCCACGGGTTGGGGGGCCGGCGTGGCATGTGGGTGGAGCGCCGCGCAAGGGCGCCGCCCGGGACAGTGTATAACCGCCCCAAGGcccc                                        >  2:7276648/1‑150 (MQ=255)
                                                                                                           ttGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCg                                       <  2:9546680/150‑1 (MQ=255)
                                                                                                               gtgtCGCGGCTCGGTTTTTGGAATGTGGTGTTTGCCCACACCCCAAACCTAAACCACCCCCGGGGGAGGGGGGCCGGCGTGGCATGGGGGGGGAGCGCCGCGCGAGGGCGCAGCCAGGAAAGATGTGTAACCACCCCAAGGCCCCCGGTa                                   >  2:3002553/1‑150 (MQ=255)
                                                                                                               gtgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTa                                   <  2:901618/150‑1 (MQ=255)
                                                                                                                 gtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTAACCCCAACCCACTCCCGCACCCGGGAGAGGGGGCCGGGGGTGCCGTGTGGGTAGAGCGCCTCGCTCGGGCGCAGCCGGGTACGATGTATACCCGCCCCAAGGCCCCCGGGATc                                 >  2:6516566/1‑150 (MQ=255)
                                                                                                                  tCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCGCTCCCCCACGCCGGGGAGGGGGGCCGGGGGGCCATGTGGGTGGAGCGCCACGCTAGGGCGCACACGGGAACCATGTCTAACCACCCCAAGGGCCCGGGTATCt                                >  2:4349592/1‑150 (MQ=255)
                                                                                                                       gATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAt                           <  2:569876/150‑1 (MQ=255)
                                                                                                                        aTCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAtt                          <  2:1025038/150‑1 (MQ=255)
                                                                                                                        aTCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAtt                          <  1:116620/150‑1 (MQ=255)
                                                                                                                        aTCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAtt                          <  1:4245646/150‑1 (MQ=255)
                                                                                                                        aTCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTATCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAtt                          <  2:1654188/150‑1 (MQ=255)
                                                                                                                            gTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACAACCCCACCCCGGGGAGGGGGGCCGGCGTGGCGTTTGGGTCGAGCGCCACCCACGGGCGCACCCGGGTAAGAATTATACCCACCCCAAAGCCCCCGGGATAAGGAAATAGGc                      >  2:7125495/1‑150 (MQ=255)
                                                                                                                                ttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGccccc                  <  1:1747097/150‑1 (MQ=255)
                                                                                                                                ttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGccccc                  <  1:4439772/150‑1 (MQ=255)
                                                                                                                                      tgtgGAGTTGGCCCGCACCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGAGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagccca            <  2:7615222/150‑1 (MQ=255)
                                                                                                                                        tggtgTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAgg          <  2:571271/150‑1 (MQ=255)
                                                                                                                                         ggtgTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGc         <  2:10621000/150‑1 (MQ=255)
                                                                                                                                          gtgtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCGTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCACCCCAAGGCCCCGGGTATCTGGAAATCGGCCCCCAGCCCAGGCa        >  2:448104/1‑150 (MQ=255)
                                                                                                                                           tgtTGGCCCTCACCCCAACCCACTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGGATCTGGAATTCGGCCCCCAGCCCAGGCaa       >  1:7618922/1‑150 (MQ=255)
                                                                                                                                            gtTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAc      <  2:3452372/150‑1 (MQ=255)
                                                                                                                                            gtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCacc      >  2:5366205/1‑148 (MQ=255)
                                                                                                                                              tGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCa    <  1:6438465/150‑1 (MQ=255)
                                                                                                                                               ggCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaa   >  2:10407380/1‑150 (MQ=255)
                                                                                                                                               ggCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCGTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaa   >  2:10032015/1‑150 (MQ=255)
                                                                                                                                               ggCCCTCACCCCAACCCACTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCAAGGCCCCGGGTATCTGGAATTAGGCCCCCAGCCCAGGCAACCaa   >  1:2848915/1‑150 (MQ=255)
                                                                                                                                                gCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaa  <  2:844360/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAA  >  NC_008463/3515716‑3516009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: