| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,362,363 | G→C | pseudogene (106/252 nt) | oprI ← | outer membrane lipoprotei OprI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,362,363 | 0 | G | C | 99.7% | 1245.0 / NA | 317 | pseudogene (106/252 nt) | oprI | outer membrane lipoprotei OprI |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (144/172); total (144/173) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 317 total aligned reads displayed.
ATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCAATCTC > NC_008463/2362216‑2362509 | aTTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCtt < 1:8082892/150‑1 (MQ=255) ttACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTc > 1:10541252/1‑150 (MQ=255) tGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAg > 2:1182260/1‑150 (MQ=255) tGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAg < 1:3250159/150‑1 (MQ=255) tGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGATTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAg < 2:394173/150‑1 (MQ=255) gCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGc > 1:5058748/1‑150 (MQ=255) ggctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCgg > 2:7347920/1‑150 (MQ=255) tggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCa > 1:9290600/1‑150 (MQ=255) ggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAg < 2:471222/150‑1 (MQ=255) ggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAg < 1:1698438/150‑1 (MQ=255) ctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGAc > 1:8824377/1‑150 (MQ=255) ttttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGa > 1:9723413/1‑150 (MQ=255) cAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTc < 1:4935189/150‑1 (MQ=255) aGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCg < 2:2468177/150‑1 (MQ=255) tGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGttt > 1:3125326/1‑150 (MQ=255) tGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGttt < 1:4673417/150‑1 (MQ=255) tGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGttt < 1:10046311/150‑1 (MQ=255) gcgcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTc < 2:6491461/150‑1 (MQ=255) gcgcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTc > 2:7814934/1‑150 (MQ=255) cAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCttt > 2:14643/1‑150 (MQ=255) cAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCttt < 2:2610295/150‑1 (MQ=255) aGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTg < 2:6882662/150‑1 (MQ=255) gggCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg > 2:3590962/1‑150 (MQ=255) gggCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg < 1:6228548/150‑1 (MQ=255) gggCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg > 2:9404932/1‑150 (MQ=255) gCTCGTTAGCCTCGTCAGCGGACTGCTGAGCTTTCAGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTATCGAGTGgc < 2:3494977/150‑1 (MQ=255) cTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGgct < 2:5916521/150‑1 (MQ=255) cGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGgctgc < 1:225025/150‑1 (MQ=255) gTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGgctgct < 1:6435815/150‑1 (MQ=255) tAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCtgctgc < 2:5532014/150‑1 (MQ=255) tAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCtgctgc < 2:4260866/150‑1 (MQ=255) tAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCtgctgc < 2:8503270/150‑1 (MQ=255) aGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCa > 1:5364928/1‑150 (MQ=255) gCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCaa > 2:7668352/1‑150 (MQ=255) ccTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAAc < 2:1151464/150‑1 (MQ=255) cGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCgg > 2:4974872/1‑150 (MQ=255) gTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGt < 1:9347385/150‑1 (MQ=255) aGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGc < 2:8074791/150‑1 (MQ=255) gCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGcc > 1:6834138/1‑150 (MQ=255) ggTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAg > 1:7548830/1‑150 (MQ=255) gTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGa < 1:1592439/150‑1 (MQ=255) gTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGa > 1:94307/1‑150 (MQ=255) tCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGaa > 2:10376393/1‑150 (MQ=255) ctgctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAc > 1:5227111/1‑150 (MQ=255) gctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcag < 2:10218242/150‑1 (MQ=255) ctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagc < 1:4720309/150‑1 (MQ=255) ctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagc > 2:9233862/1‑150 (MQ=255) tgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCCACCGGTGGCCAGAAcagca > 1:4389583/1‑150 (MQ=255) gAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagcag < 1:9104182/150‑1 (MQ=255) gCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagcc < 2:5788673/150‑1 (MQ=255) cTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagcca > 2:4147023/1‑150 (MQ=255) tCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGGAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagag < 2:540990/150‑1 (MQ=255) tCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagag < 2:4416815/150‑1 (MQ=255) tGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagcc > 1:7316327/1‑150 (MQ=255) agcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagccag > 2:8797276/1‑150 (MQ=255) gcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAgccagagccaga < 2:3053124/150‑1 (MQ=255) cagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGccagagccagag < 1:3470781/150‑1 (MQ=255) cagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGccagagccagag < 2:2195449/150‑1 (MQ=255) gcgcCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagca > 2:9583593/1‑150 (MQ=255) cgcCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcag < 1:2908808/150‑1 (MQ=255) cgcCCAGAGCTTCGTCAGCCTTGCGAGAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcag < 2:6203089/150‑1 (MQ=255) cccAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcagag < 2:2035663/150‑1 (MQ=255) cccAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcagag < 2:10555583/150‑1 (MQ=255) gagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAtt > 2:6807544/1‑150 (MQ=255) gagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAtt < 1:2972185/150‑1 (MQ=255) agCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGACCACGAGCAGCTGCGTCTTCGGTAGCTGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAttt < 2:3989440/150‑1 (MQ=255) agCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCAGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAttt < 2:1286547/150‑1 (MQ=255) ttCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAg < 1:7110236/150‑1 (MQ=255) tCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGa < 1:1165816/150‑1 (MQ=255) gTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAAc < 1:2858327/150‑1 (MQ=255) cAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgt < 1:3968053/150‑1 (MQ=255) cAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgt < 1:243637/150‑1 (MQ=255) gCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCTGTTTCTTTGGAGTGGCTGCTGCAACCTGTGGCCATAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttg > 2:194900/1‑150 (MQ=255) gCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttg < 1:8370407/150‑1 (MQ=255) gCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCGGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttg < 2:7421732/150‑1 (MQ=255) cTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttgtt < 2:2873283/150‑1 (MQ=255) tAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgtg > 1:2054072/1‑150 (MQ=255) gCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTc > 2:6773965/1‑150 (MQ=255) tcgTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTcccc > 2:7268551/3‑150 (MQ=255) tcgTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTcccc > 1:5405007/3‑150 (MQ=255) tcgTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTcccc > 1:5929359/3‑150 (MQ=255) gTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCtt < 2:1759156/150‑1 (MQ=255) tCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTa > 1:10067647/1‑150 (MQ=255) cgcgAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGt < 1:5186687/150‑1 (MQ=255) gAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGa > 2:1780598/1‑150 (MQ=255) aGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGAc < 1:7596757/150‑1 (MQ=255) gCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACa < 1:10678149/150‑1 (MQ=255) ccTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACAt < 2:4224872/150‑1 (MQ=255) cTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACAtt > 1:315114/1‑150 (MQ=255) tGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACAttt < 1:2540930/150‑1 (MQ=255) gAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTc < 2:7016500/150‑1 (MQ=255) gAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTc < 2:4793154/150‑1 (MQ=255) gCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCa < 1:5379080/150‑1 (MQ=255) gCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCa < 1:9535475/150‑1 (MQ=255) gCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCa > 1:3768625/1‑150 (MQ=255) aCGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATa < 1:576200/150‑1 (MQ=255) gAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAAc > 2:7899038/1‑150 (MQ=255) cagcTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGc > 1:2403379/1‑150 (MQ=255) agcTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCa < 1:7688819/150‑1 (MQ=255) gCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCAAtct > 2:3665130/1‑150 (MQ=255) | ATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCAATCTC > NC_008463/2362216‑2362509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |