Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 96,360 T→C pseudogene (274/723 nt) tagH ← type VI secretion system‑associated FHA domain protein TagH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00846396,3600TC100.0% 2114.4 / NA 532pseudogene (274/723 nt)tagHtype VI secretion system‑associated FHA domain protein TagH
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (242/290);  total (242/290)

Only 100 of 560 total aligned reads displayed.

ATCCGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACAGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGTTGTCCAGCGTGCGCAGCACGTCCACCAGTCCTTCCACCA‑GACAGCGATAGGTGCGTCGGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑ACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCG  >  NC_008463/96214‑96505
                                                                                                                                                  |                                                                                                                                                   
aTCCGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCcgcgcgcg                                                                                                                                                  <  2:6467290/150‑1 (MQ=255)
aTCCGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGGTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCcgcgcgcg                                                                                                                                                  >  1:616340/1‑150 (MQ=255)
 tCCGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCgcgcgcgc                                                                                                                                                 <  1:5669368/150‑1 (MQ=255)
 tCCGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCgcgcgcgc                                                                                                                                                 <  2:8597981/150‑1 (MQ=255)
  ccGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCgca                                                                                                                                                <  1:6012285/150‑1 (MQ=255)
   cGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGACCTCGCCCTTCAGGCTGGCCCGCGCGCgcag                                                                                                                                               >  2:7177183/1‑150 (MQ=255)
     gcgcCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCgcagca                                                                                                                                             <  1:6595511/150‑1 (MQ=255)
     gcgcCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCgcagca                                                                                                                                             <  2:1908077/150‑1 (MQ=255)
       gcCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACg                                                                                                                                           <  2:6341327/150‑1 (MQ=255)
        ccATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGt                                                                                                                                          <  2:1483344/150‑1 (MQ=255)
             aaCGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTccacc                                                                                                                                     <  2:6875617/150‑1 (MQ=255)
             aaCGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTccacc                                                                                                                                     <  1:6483528/150‑1 (MQ=255)
             aaCGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTccacc                                                                                                                                     >  1:6959724/1‑150 (MQ=255)
              aCGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTccacca                                                                                                                                    <  2:5907112/150‑1 (MQ=255)
              aCGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTccacca                                                                                                                                    >  1:384641/1‑150 (MQ=255)
                 ccTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTc                                                                                                                                 >  1:2643379/1‑150 (MQ=255)
                 ccTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTc                                                                                                                                 >  2:3338219/1‑150 (MQ=255)
                 ccTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTc                                                                                                                                 >  1:4309517/1‑150 (MQ=255)
                 ccTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTc                                                                                                                                 >  1:4705829/1‑150 (MQ=255)
                    ggTTTTCGCGGAGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTACTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCAACCAGTCCtt                                                                                                                              >  2:7830408/1‑150 (MQ=255)
                    ggTTGTCGCGGCGCAGCAGTAGCATCTTGGATTCGTCTAAGTTCTGCGAGAACTTCAGAGTGTTTTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCtt                                                                                                                              <  2:1159885/150‑1 (MQ=255)
                    ggTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCtt                                                                                                                              <  2:4872876/150‑1 (MQ=255)
                      ttGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTcc                                                                                                                            <  1:4453784/150‑1 (MQ=255)
                        gTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTccac                                                                                                                          >  2:1649445/1‑150 (MQ=255)
                          cgcgGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTccacca                                                                                                                        <  2:10408143/150‑1 (MQ=255)
                           gcggcgCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTccacctg                                                                                                                       >  2:3441466/1‑148 (MQ=255)
                           gcggcgCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑g                                                                                                                      >  1:5892239/1‑150 (MQ=255)
                                   gcagGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGAt                                                                                                              <  2:1023371/150‑1 (MQ=255)
                                   gcagGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGAt                                                                                                              <  2:66176/150‑1 (MQ=255)
                                     agGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAg                                                                                                            >  1:4892957/1‑150 (MQ=255)
                                     agGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAg                                                                                                            <  1:9014152/150‑1 (MQ=255)
                                     agGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAg                                                                                                            >  1:2860784/1‑150 (MQ=255)
                                      ggAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAgc                                                                                                           <  2:1267370/150‑2 (MQ=255)
                                       gAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAgct                                                                                                          <  1:8188620/150‑3 (MQ=255)
                                        agcagcATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATANCTg                                                                                                         <  2:7573847/150‑1 (MQ=255)
                                           agcaTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCgg                                                                                                      <  1:9741829/150‑2 (MQ=255)
                                            gcaTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCggc                                                                                                     >  2:5468587/1‑148 (MQ=255)
                                            gcaTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCggc                                                                                                     <  1:3287452/150‑3 (MQ=255)
                                              aTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCggccg                                                                                                   >  1:3157567/1‑146 (MQ=255)
                                                ggCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGAt                                                                                                 <  2:5603705/150‑1 (MQ=255)
                                                     cgtcgACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCtt                                                                                            <  1:7596846/150‑1 (MQ=255)
                                                      gtcgACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTc                                                                                           <  2:9171335/150‑1 (MQ=255)
                                                          aCGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGAGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATc                                                                                       >  2:5828397/1‑150 (MQ=255)
                                                           cGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCt                                                                                      <  2:4990056/150‑1 (MQ=255)
                                                           cGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCt                                                                                      <  1:7350525/150‑1 (MQ=255)
                                                             ttCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTgc                                                                                    >  2:535801/1‑150 (MQ=255)
                                                               cGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTgcgc                                                                                  >  1:7042/1‑150 (MQ=255)
                                                                ggCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCt                                                                                 <  2:3017025/150‑1 (MQ=255)
                                                                 gcgcGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCtt                                                                                >  1:10049094/1‑150 (MQ=255)
                                                                   gcgAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCg                                                                              <  1:5136251/150‑1 (MQ=255)
                                                                    cgAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCgg                                                                             >  1:7465096/1‑150 (MQ=255)
                                                                      aaCTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGgcg                                                                           >  2:8063087/1‑150 (MQ=255)
                                                                      aaCTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGgcg                                                                           >  1:10700090/1‑150 (MQ=255)
                                                                       aCTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGgcgc                                                                          >  2:947155/1‑150 (MQ=255)
                                                                       aCTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGgcgc                                                                          >  1:4066546/1‑150 (MQ=255)
                                                                        cTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgcc                                                                         >  2:2410950/1‑150 (MQ=255)
                                                                         ttCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgccg                                                                        <  1:1047619/150‑1 (MQ=255)
                                                                            aGCTGGTAGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTACACCACGAC‑GAGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgccggcc                                                                     <  2:2101046/150‑1 (MQ=255)
                                                                            aGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgccggcc                                                                     >  1:1995198/1‑150 (MQ=255)
                                                                            aGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgccggcc                                                                     >  2:9007736/1‑150 (MQ=255)
                                                                             gCGTGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgccggccg                                                                    <  2:1844092/150‑1 (MQ=255)
                                                                              cGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGccggccgg                                                                   >  1:9226782/1‑150 (MQ=255)
                                                                              cGGGTTGTTCTGCAACGGCTGGATCATGGTCTGCGCAATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGccggccgg                                                                   >  1:8661826/1‑150 (MQ=255)
                                                                                ggTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGt                                                                 <  1:1539838/150‑1 (MQ=255)
                                                                                ggTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGt                                                                 <  1:7899712/150‑1 (MQ=255)
                                                                                  ttgttCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCg                                                               <  2:518979/150‑1 (MQ=255)
                                                                                     ttCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGAcc                                                            <  1:8879824/150‑1 (MQ=255)
                                                                                      tCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCt                                                           <  1:1390819/150‑1 (MQ=255)
                                                                                        tGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTc                                                         <  2:6054822/150‑1 (MQ=255)
                                                                                           accggCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aac                                                     <  1:7180392/147‑3 (MQ=255)
                                                                                           accggCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGATTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aac                                                     <  1:1881505/147‑3 (MQ=255)
                                                                                            ccggCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aact                                                    >  2:3760849/3‑147 (MQ=255)
                                                                                               gCTGGATCATGGTCTGCGCCATGCGGTACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTggg                                                  <  1:5423371/150‑1 (MQ=255)
                                                                                               gCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTggg                                                  >  1:3617570/1‑150 (MQ=255)
                                                                                                cTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGt                                                 <  1:2201097/150‑1 (MQ=255)
                                                                                                  ggATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCa                                               >  2:4452955/1‑150 (MQ=255)
                                                                                                  ggATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCa                                               >  2:10665513/1‑150 (MQ=255)
                                                                                                  ggATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCa                                               >  2:396232/1‑150 (MQ=255)
                                                                                                   gATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCAt                                              <  1:1647419/150‑1 (MQ=255)
                                                                                                     tCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGc                                            <  2:8225289/150‑1 (MQ=255)
                                                                                                     tCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGc                                            <  1:6778819/150‑1 (MQ=255)
                                                                                                           tCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGgcgc                                      <  2:287394/150‑1 (MQ=255)
                                                                                                           tCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGgcgc                                      >  2:7271798/1‑150 (MQ=255)
                                                                                                            cTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGcgcc                                     >  2:678247/1‑150 (MQ=255)
                                                                                                             tGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGcgccg                                    >  2:5700102/1‑150 (MQ=255)
                                                                                                              gcgcCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGcgccgc                                   <  1:8110344/150‑1 (MQ=255)
                                                                                                               cgcCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCcgcg                                  >  1:5790506/1‑150 (MQ=255)
                                                                                                                 ccATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCa                                >  1:8417387/1‑150 (MQ=255)
                                                                                                                    tGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGa                             <  2:2596786/150‑1 (MQ=255)
                                                                                                                     gCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGaa                            <  2:10522624/150‑1 (MQ=255)
                                                                                                                       ggAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTGCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACg                          <  2:9357250/150‑1 (MQ=255)
                                                                                                                        gAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGc                         <  2:4230009/150‑1 (MQ=255)
                                                                                                                          aCTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCt                       <  1:9844176/150‑1 (MQ=255)
                                                                                                                               cccTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCATTCCTTACACCA‑GGCCGCGATAGCTGCGGCCGATTGCTTCCAAATGCGCTTCGGCGCCGGCCGGGTCGACCATCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTgcagc                  >  2:4575580/1‑150 (MQ=255)
                                                                                                                               cccTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTgcagc                  >  1:4955373/1‑150 (MQ=255)
                                                                                                                               cccTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTgcagc                  <  2:8888710/150‑1 (MQ=255)
                                                                                                                                ccTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCC‑GGCCGCGATCGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTgcagca                 <  2:7996998/150‑1 (MQ=255)
                                                                                                                                   tCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGt              <  2:6150846/150‑1 (MQ=255)
                                                                                                                                             ccgcgcgcgcAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCGTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCgccggc    <  1:5201269/148‑1 (MQ=255)
                                                                                                                                              cgcgcgcgcAGCACGTCCACCAGTCCTTCCACCA‑GGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCgccggcc   <  1:10147190/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
ATCCGGCGCCATGAACGCCTGGTTGTCGCGGCGCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACAGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGTTGTCCAGCGTGCGCAGCACGTCCACCAGTCCTTCCACCA‑GACAGCGATAGGTGCGTCGGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑ACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCG  >  NC_008463/96214‑96505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑