Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 3,426,133 Δ1 bp intergenic (+104/+138) mexY → / ← PA14_RS15615 multidrug efflux RND transporter permease subunit MexY/YjiK family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,426,1310C.99.8% 2251.7 / ‑2.2 456intergenic (+102/+140)mexY/PA14_RS15615multidrug efflux RND transporter permease subunit MexY/YjiK family protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base . (227/227);  minor base G (0/1);  total (227/229)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 468 total aligned reads displayed.

GCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTCG  >  NC_008463/3425982‑3426277
                                                                                                                                                     |                                                                                                                                                  
  gccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccgg                                                                                                                                                 >  2:8055489/1‑149 (MQ=255)
     gcgcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCa                                                                                                                                             >  2:4192864/1‑151 (MQ=255)
      cgcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCaa                                                                                                                                            <  1:10444988/151‑1 (MQ=255)
      cgcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCaa                                                                                                                                            <  2:770111/151‑1 (MQ=255)
       gcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAAc                                                                                                                                           <  1:4370619/151‑1 (MQ=255)
       gcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGGT‑CCGGCCAAc                                                                                                                                           >  2:5729418/1‑151 (MQ=255)
        cACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGACACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGAGCGTT‑CCGGCCAACg                                                                                                                                          >  2:8781253/1‑151 (MQ=255)
        cACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACg                                                                                                                                          <  2:3973712/151‑1 (MQ=255)
          ccGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGc                                                                                                                                        >  2:8207350/1‑151 (MQ=255)
           cGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGcc                                                                                                                                       >  1:868070/1‑151 (MQ=255)
                ccTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGAc                                                                                                                                  <  2:3668534/151‑1 (MQ=255)
                 cTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGAcc                                                                                                                                 >  1:9166079/1‑151 (MQ=255)
                    gCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTc                                                                                                                              <  1:7395954/151‑1 (MQ=255)
                    gCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTc                                                                                                                              <  2:9618558/151‑1 (MQ=255)
                        cGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACGGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgggg                                                                                                                          >  2:5972118/1‑151 (MQ=255)
                         ggATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGc                                                                                                                         >  2:3351627/1‑151 (MQ=255)
                            tCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAg                                                                                                                      >  1:1650730/1‑151 (MQ=255)
                             cccGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGc                                                                                                                     >  1:2907072/1‑151 (MQ=255)
                              ccGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCt                                                                                                                    <  2:9939777/151‑1 (MQ=255)
                                gACGGAGCAAGCCTGCTGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGAGCGACGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTgg                                                                                                                  <  2:182458/151‑1 (MQ=255)
                                gACGGAGCAAGCCTGATGCCCCTCGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCAGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCGTCGGGGCAAGCAgg                                                                                                                  >  2:3035098/1‑151 (MQ=255)
                                gACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCGCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGAGCTTCGGGGCACGCTgg                                                                                                                  >  2:2552659/1‑151 (MQ=255)
                                 aCGGAGCAAGCCTGATGCCCCTCGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGga                                                                                                                 <  2:6732704/151‑1 (MQ=255)
                                 aCGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGga                                                                                                                 <  1:8089402/151‑1 (MQ=255)
                                  cGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGgac                                                                                                                >  2:8857525/1‑151 (MQ=255)
                                    gAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCCCTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCCTCGGCCCCGACCGGCGGGGCAAGCTGgacga                                                                                                              >  2:226803/1‑151 (MQ=255)
                                     aGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGTTCGTT‑CCGGCCAACGGCCCCGACCTGCGGGGCAAGCTGgacgac                                                                                                             >  2:9224988/1‑151 (MQ=255)
                                     aGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGgccgac                                                                                                             >  2:1024754/1‑151 (MQ=255)
                                      gCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACt                                                                                                            <  1:5399199/151‑1 (MQ=255)
                                       cAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGTCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTg                                                                                                           >  1:9519946/1‑151 (MQ=255)
                                       cAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTGCGGGGCAAGCTGGACGACTg                                                                                                           >  1:1498493/1‑151 (MQ=255)
                                        aaGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTgg                                                                                                          <  2:8096136/151‑1 (MQ=255)
                                         aGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGc                                                                                                         >  2:4675697/1‑151 (MQ=255)
                                            cTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAc                                                                                                      >  2:6493976/1‑151 (MQ=255)
                                            cTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAc                                                                                                      <  1:4704217/151‑1 (MQ=255)
                                             tGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAca                                                                                                     >  1:5236699/1‑151 (MQ=255)
                                               aTGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagc                                                                                                   <  2:8735037/151‑1 (MQ=255)
                                               aTGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagc                                                                                                   >  2:6851575/1‑151 (MQ=255)
                                                tGCCCCTAGCGACACTCTCGCTCCCCACCCGGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagca                                                                                                  <  1:10432854/151‑1 (MQ=255)
                                                tGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagca                                                                                                  <  1:5945824/151‑1 (MQ=255)
                                                tGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagca                                                                                                  <  1:3944361/151‑1 (MQ=255)
                                                  ccccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGt                                                                                                <  1:10394774/151‑1 (MQ=255)
                                                  ccccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGt                                                                                                >  1:6473567/1‑151 (MQ=255)
                                                   cccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGtt                                                                                               >  2:5454454/1‑151 (MQ=255)
                                                       aGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCAcc                                                                                           >  2:3624426/1‑151 (MQ=255)
                                                        gCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCg                                                                                          <  1:1796477/151‑1 (MQ=255)
                                                         cGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGa                                                                                         <  1:8273910/151‑1 (MQ=255)
                                                          gAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAc                                                                                        >  2:4317954/1‑151 (MQ=255)
                                                           aaaCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAcc                                                                                       <  1:3434818/151‑1 (MQ=255)
                                                           aaaCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCTACAGCAGTTCTCCGAcc                                                                                       >  1:7847818/1‑151 (MQ=255)
                                                            aaCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAccc                                                                                      <  2:7812210/151‑1 (MQ=255)
                                                            aaCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAccc                                                                                      <  1:5734408/151‑1 (MQ=255)
                                                             aCTCTCGCTCCCCACCCGGGCACTGTTCGTCGGGCTGCTCGGCGCCGGCCCACCGTCGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCATCGGCCCCGACGTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCg                                                                                     <  2:11184110/151‑1 (MQ=255)
                                                               tctcGCTCCCGACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgct                                                                                   <  1:6976349/151‑1 (MQ=255)
                                                               tctcGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgct                                                                                   <  1:2050188/151‑1 (MQ=255)
                                                                   gCTCCCCACCCTGGCACGGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGctgctg                                                                               <  2:8349377/151‑1 (MQ=255)
                                                                     tCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCg                                                                             >  1:1320136/1‑151 (MQ=255)
                                                                     tCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCg                                                                             >  1:9900373/1‑151 (MQ=255)
                                                                       cccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGAc                                                                           <  1:9287659/151‑1 (MQ=255)
                                                                          ccccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGGTCACCGACCCGCTGCAGCGACAga                                                                        <  2:3397450/150‑1 (MQ=255)
                                                                          aCCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGAACTTCGGGGCAAGCTCGACGACTGGCAACAGCAGTTAACCGACCCGCTGCTGCGACAga                                                                        >  2:7350019/1‑151 (MQ=255)
                                                                           cccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGTACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat                                                                       >  1:8813599/1‑151 (MQ=255)
                                                                           cccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat                                                                       <  1:10998490/151‑1 (MQ=255)
                                                                           cccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat                                                                       <  1:2680884/151‑1 (MQ=255)
                                                                            ccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgatg                                                                      <  1:3714434/151‑1 (MQ=255)
                                                                              tGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGTCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgatgat                                                                    <  1:10077156/151‑1 (MQ=255)
                                                                               ggCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATc                                                                   <  1:2281559/151‑1 (MQ=255)
                                                                               ggCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATc                                                                   >  2:7190537/1‑151 (MQ=255)
                                                                                gCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCg                                                                  >  1:10194407/1‑151 (MQ=255)
                                                                                  aCTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc                                                                <  2:19571/151‑1 (MQ=255)
                                                                                  aCTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc                                                                >  2:9074343/1‑151 (MQ=255)
                                                                                  aCTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc                                                                <  1:3236848/151‑1 (MQ=255)
                                                                                   cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCt                                                               <  2:5093063/151‑1 (MQ=255)
                                                                                    tgtgCGTCGGGCTGCTCGGCGCCTGCACACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTa                                                              >  1:2494301/1‑151 (MQ=255)
                                                                                     gtgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGAGCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGAGGACTGGCAACTGGAGTGCACCGACCCTAGGCTGCGACAGATGAGCGGCtcc                                                             >  2:10728412/1‑149 (MQ=255)
                                                                                      tgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAcg                                                            >  1:9607029/1‑151 (MQ=255)
                                                                                       gcggcgGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAcgc                                                           <  1:8431595/151‑1 (MQ=255)
                                                                                        cGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAcgcg                                                          <  1:4204500/151‑1 (MQ=255)
                                                                                           cGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCg                                                       >  1:1868512/1‑151 (MQ=255)
                                                                                             ggCCGCTCCGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGCTCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACGGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGgc                                                     <  2:612263/151‑1 (MQ=255)
                                                                                                 gctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTa                                                 <  2:6401080/151‑1 (MQ=255)
                                                                                                  ctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTAt                                                >  1:7605459/1‑151 (MQ=255)
                                                                                                    cGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATcc                                              <  1:9007649/151‑1 (MQ=255)
                                                                                                     ggCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCg                                             <  1:8766736/151‑1 (MQ=255)
                                                                                                         ccTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgcgc                                         >  1:308488/1‑151 (MQ=255)
                                                                                                           tGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgcgcgc                                       >  2:7268099/1‑151 (MQ=255)
                                                                                                               cACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGc                                   >  1:2754981/1‑151 (MQ=255)
                                                                                                               cACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGc                                   <  2:5525692/151‑1 (MQ=255)
                                                                                                                aCCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCACCGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGcc                                  <  1:6815411/151‑1 (MQ=255)
                                                                                                                  cGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGGTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTg                                <  2:3814476/151‑1 (MQ=255)
                                                                                                                   gACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGANCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGa                               >  1:5876876/1‑151 (MQ=255)
                                                                                                                   gACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCGGa                               >  1:6023795/1‑151 (MQ=255)
                                                                                                                        cTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTcc                          <  1:8027512/151‑1 (MQ=255)
                                                                                                                            gCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccgccg                      <  1:3642916/151‑1 (MQ=255)
                                                                                                                              aGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACCGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTc                    >  1:7668922/1‑151 (MQ=255)
                                                                                                                               gCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCCAGCCTGAATTCCGCCGTcc                   >  2:10997653/1‑151 (MQ=255)
                                                                                                                                  gcgcgcgGCCCCGATAGTT‑CCGGCCAACGGCCACGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGATCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGTCGCGCAAGCCTGAATTACGCCGTCCttt                >  2:2118354/1‑151 (MQ=255)
                                                                                                                                      gcgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTccc            <  2:1316557/151‑1 (MQ=255)
                                                                                                                                         gCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGAGGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGcc         >  1:4946586/1‑151 (MQ=255)
                                                                                                                                            ccGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTa      <  1:11231370/151‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
GCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTCG  >  NC_008463/3425982‑3426277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑