| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 6,205,906 | Δ1 bp | intergenic (‑11/+186) | PA14_RS28345 ← / ← PA14_RS28350 | type VI secretion system tip protein VgrG/Hcp family type VI secretion system effector |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 6,205,903 | 0 | C | . | 100.0% | 390.1 / NA | 251 | intergenic (‑8/+189) | PA14_RS28345/PA14_RS28350 | type VI secretion system tip protein VgrG/Hcp family type VI secretion system effector |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (119/132); total (119/132) | |||||||||||
Only 100 of 269 total aligned reads displayed.
ACGGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTCCCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCTT > NC_008463/6205753‑6206019 | cGGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTcc < 1:1288684/151‑1 (MQ=31) cGGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAAGGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTcc > 2:6521713/1‑151 (MQ=14) ggggCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccc < 2:8514664/151‑1 (MQ=31) ggggCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccc < 1:8258132/151‑1 (MQ=31) ggCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCGGGCAGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTGGTccctc < 1:6577462/151‑3 (MQ=2) gCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccctca < 1:790726/151‑4 (MQ=1) aGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgatt < 1:10770828/151‑1 (MQ=1) ggTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgattc < 1:3302686/151‑1 (MQ=11) gTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgattcg > 1:7395655/1‑151 (MQ=11) gTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgattcg < 1:9364924/151‑1 (MQ=11) gAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgattcgatt > 1:10936274/1‑151 (MQ=11) taGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTg < 2:7574300/150‑1 (MQ=11) ggCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTc > 2:2442154/1‑151 (MQ=11) ggCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTc > 2:8074011/1‑151 (MQ=11) ggCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGAGTGTc > 2:8713749/1‑151 (MQ=2) gCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcc > 2:6945476/1‑151 (MQ=11) cGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcct > 1:9603111/1‑151 (MQ=11) cGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcct < 2:4177039/151‑1 (MQ=11) gAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACGGGCGCAGGCGACCGATTCGATTGTcctg < 2:10698993/151‑1 (MQ=2) aaCGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgc < 1:484033/151‑1 (MQ=11) aaCGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgc > 1:8875220/1‑151 (MQ=11) aCGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgcc < 1:5318889/151‑1 (MQ=11) cGGCTGGCTGATGGCTTCGCGGCCGCTGCAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAAGGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgcct < 2:7690019/151‑1 (MQ=2) ggctggctGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgcctg > 1:6386338/1‑151 (MQ=11) ctggctgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGgc > 2:9366619/1‑151 (MQ=11) gctgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGcgcg > 2:8247669/1‑151 (MQ=11) tgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCggg > 2:1242089/1‑151 (MQ=11) gCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCgaga < 2:3535519/151‑1 (MQ=11) ttCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACa < 1:8490085/151‑1 (MQ=11) gcgGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGTGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAgg > 2:3103857/1‑151 (MQ=2) cgGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAggg > 1:1214008/1‑151 (MQ=11) cgGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAggg < 1:8946962/151‑1 (MQ=11) cgGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAggg > 1:2374363/1‑151 (MQ=11) cTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCa < 2:9873115/151‑1 (MQ=11) cTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCa < 1:10356552/151‑1 (MQ=11) tGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAg > 2:2358428/1‑151 (MQ=11) aaGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGc > 1:6082110/1‑151 (MQ=11) aaGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGc > 2:276730/1‑151 (MQ=11) aaGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGc > 2:6930072/1‑151 (MQ=11) aGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCt < 2:269618/151‑1 (MQ=11) aGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCt < 2:10502402/151‑1 (MQ=11) ggAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTc < 2:5949317/151‑1 (MQ=11) ggAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTc < 1:7876591/151‑1 (MQ=11) ggAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTAGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTc < 2:4039008/151‑1 (MQ=2) agagCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGATGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGa < 1:6865819/151‑1 (MQ=2) gCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCg < 2:7297640/151‑1 (MQ=11) gCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCg < 2:3598444/151‑1 (MQ=11) cACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCgg < 2:5833439/151‑1 (MQ=11) cACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCgg < 1:2567774/151‑1 (MQ=11) cACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCgg > 1:4056079/1‑151 (MQ=11) aCCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGa > 1:7491447/1‑151 (MQ=11) ccTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGaa < 2:4673598/151‑1 (MQ=11) cTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAg > 1:9226166/1‑151 (MQ=11) tGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGc < 1:10164076/151‑1 (MQ=11) gCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCt < 2:9500516/151‑1 (MQ=11) gCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCt < 1:5912366/151‑1 (MQ=11) cAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTg > 2:8193870/1‑151 (MQ=11) ggTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGcc > 2:9275125/1‑151 (MQ=11) gTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCt > 1:2935516/1‑151 (MQ=11) cGAGGGCGATGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTac > 1:1877055/1‑151 (MQ=2) gAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTaca < 2:7476592/151‑1 (MQ=11) aGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTacaa > 1:6758350/1‑151 (MQ=11) aGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTacaa > 1:4491062/1‑151 (MQ=11) aGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTacaa < 1:4677697/151‑1 (MQ=11) ggCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTacaaca < 1:2154748/151‑1 (MQ=11) ggCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTacaaca < 1:8979933/151‑1 (MQ=11) cGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACaaa < 1:4249284/151‑1 (MQ=11) aGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGc > 2:8961804/1‑151 (MQ=11) aGGCCGTCGATGGAGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTTGCGCGGGCGAGACATGGGCGCGCAGGCTCGATCGGAAGCTGCCTacaacttagc < 1:4981163/151‑6 (MQ=11) ggCCGTCGATGGCGAGGCTGACATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACACCAAAGCg < 2:263756/151‑1 (MQ=2) ggCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCg < 1:1525694/151‑1 (MQ=11) ggCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCg < 1:3243085/151‑1 (MQ=11) ggCCGTCGATGGCGAGGCTGAAATGGGTCGGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCg < 2:4903107/151‑1 (MQ=2) ggCCGTCGATGGCGAGGCTGAAATGGGACTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCg > 2:10274270/1‑151 (MQ=2) ccGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGc > 1:7273274/1‑151 (MQ=11) ccGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGc < 1:8347492/151‑1 (MQ=11) ccGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGc > 2:6202336/1‑151 (MQ=11) cGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCa > 1:10243582/1‑151 (MQ=11) cGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCa > 1:159683/1‑151 (MQ=11) gTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCAt < 2:6532223/151‑1 (MQ=11) gTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCAt > 1:1124548/1‑151 (MQ=11) cGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCg > 2:631425/1‑151 (MQ=11) cGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCg < 2:10379162/151‑1 (MQ=11) gATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGa < 2:10053274/151‑1 (MQ=11) aTGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAc < 2:4465752/151‑1 (MQ=11) aTGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAc < 1:5526467/151‑1 (MQ=11) aTGGCGAGGCTGAAATGGGTCTGGTGGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAc < 1:432918/151‑1 (MQ=2) tGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAcc < 1:8710049/151‑1 (MQ=11) cGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCgg > 1:9740221/1‑151 (MQ=11) cGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCgg < 2:9685014/151‑1 (MQ=11) cGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCgg < 1:11074344/151‑1 (MQ=11) cGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCgg > 1:6903286/1‑151 (MQ=11) gAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGgc > 2:6595247/1‑151 (MQ=11) aGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGgcg > 1:7821259/1‑151 (MQ=11) aGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGAGGCATCGACCCGgcg > 2:4538829/1‑151 (MQ=2) ggCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGgcgc > 2:10191585/1‑151 (MQ=11) gCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGcgcg > 1:4373559/1‑151 (MQ=11) cTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCgg > 1:6268269/1‑151 (MQ=11) cTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCgg > 1:342034/1‑151 (MQ=11) aaTGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCtt > 2:521453/1‑151 (MQ=1) | ACGGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTCCCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCTT > NC_008463/6205753‑6206019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |