Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 1,280,717 (C)6→5 intergenic (‑46/+41) PA14_RS06005 ← / ← PA14_RS06010 DUF4345 domain‑containing protein/M23 family metallopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084631,280,7120C.99.6% 2548.3 / 0.8 518intergenic (‑41/+46)PA14_RS06005/PA14_RS06010DUF4345 domain‑containing protein/M23 family metallopeptidase
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base . (293/222);  total (295/223)
Fisher's exact test for biased strand distribution p-value = 5.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 551 total aligned reads displayed.

TCGCCGCTGGTGAGCAGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGGCGC  >  NC_008463/1280562‑1280858
                                                                                                                                                      |                                                                                                                                                  
    cgcTGGTGAGCAGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGccccc                                                                                                                                                >  1:11249340/1‑151 (MQ=255)
    cgcTGGTGAGCAGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGccccc                                                                                                                                                >  1:2519508/1‑151 (MQ=255)
       tGGTGAGCAGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCACAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGccccctgt                                                                                                                                             <  1:1700645/151‑4 (MQ=255)
           gAGCAGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCt                                                                                                                                        <  1:2953960/151‑1 (MQ=255)
            aGCAGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCtt                                                                                                                                       >  1:1548677/1‑151 (MQ=255)
               aGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTg                                                                                                                                    >  1:3870350/1‑151 (MQ=255)
                gggAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGa                                                                                                                                   >  1:7266492/1‑151 (MQ=255)
                  gAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCGTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGAcc                                                                                                                                 >  2:7305309/1‑151 (MQ=255)
                        aGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGcc                                                                                                                           <  2:1386976/151‑1 (MQ=255)
                          cGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCgg                                                                                                                         >  1:5549615/1‑151 (MQ=255)
                            ggCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGgcg                                                                                                                       >  2:6791118/1‑151 (MQ=255)
                             gCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGgcgc                                                                                                                      >  1:6332639/1‑151 (MQ=255)
                              ccGGGGAAGCAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCAGGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGcgcc                                                                                                                     <  2:9039214/151‑1 (MQ=255)
                              ccGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGcgcc                                                                                                                     <  2:5310003/151‑1 (MQ=255)
                               cGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGcgccg                                                                                                                    <  1:8726456/151‑1 (MQ=255)
                                ggggAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGcgccgc                                                                                                                   >  2:3276651/1‑151 (MQ=255)
                                ggggAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGcgccgc                                                                                                                   >  1:7030078/1‑151 (MQ=255)
                                ggggAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGcgccgc                                                                                                                   >  2:513890/1‑151 (MQ=255)
                                ggggAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGcgccgc                                                                                                                   >  2:8906833/1‑151 (MQ=255)
                                      gaagaCGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCt                                                                                                             <  2:8783106/151‑1 (MQ=255)
                                        agaCGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCCGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCa                                                                                                           >  2:6927461/1‑151 (MQ=255)
                                        agaCGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCa                                                                                                           >  2:9184170/1‑151 (MQ=255)
                                         gaCGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCAc                                                                                                          >  2:3676983/1‑151 (MQ=255)
                                          aCGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACt                                                                                                         <  2:1270334/151‑1 (MQ=255)
                                          aCGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACt                                                                                                         >  2:4686942/1‑151 (MQ=255)
                                            gAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTtc                                                                                                       <  1:10930955/151‑1 (MQ=255)
                                             aaGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTtct                                                                                                      <  2:2252100/151‑1 (MQ=255)
                                               gCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCa                                                                                                    >  2:4073332/1‑151 (MQ=255)
                                                 ccAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCCGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAgg                                                                                                  >  2:5849224/1‑151 (MQ=255)
                                                 ccAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAgg                                                                                                  >  2:9787583/1‑151 (MQ=255)
                                                    ggCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCt                                                                                               <  1:9871515/151‑1 (MQ=255)
                                                     gCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTg                                                                                              <  1:209407/151‑1 (MQ=255)
                                                       cGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGa                                                                                            <  2:1633942/151‑1 (MQ=255)
                                                         aGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAg                                                                                          >  1:6664040/1‑151 (MQ=255)
                                                         aGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCGTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCCGGGCTGGAAg                                                                                          >  2:7761569/1‑151 (MQ=255)
                                                          ggACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAgg                                                                                         <  1:9308255/151‑1 (MQ=255)
                                                            aCCACTAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCa                                                                                       <  1:5807477/151‑1 (MQ=255)
                                                                 gcaCAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGGGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGAt                                                                                  <  2:3832695/149‑1 (MQ=255)
                                                                  aaCAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATg                                                                                 <  1:6157571/151‑1 (MQ=255)
                                                                       tGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGAt                                                                            <  1:1367241/151‑1 (MQ=255)
                                                                        gCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATc                                                                           <  2:7149172/151‑1 (MQ=255)
                                                                          cGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGc                                                                         <  1:1928409/151‑1 (MQ=255)
                                                                           gAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGcc                                                                        <  2:5670242/151‑1 (MQ=255)
                                                                               acaGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGt                                                                    <  2:3591313/151‑1 (MQ=255)
                                                                                caGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGTCGCCGCGGTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATAGCCGGGTc                                                                   >  1:4538686/1‑151 (MQ=255)
                                                                                caGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTc                                                                   <  2:9902944/151‑1 (MQ=255)
                                                                                caGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTc                                                                   <  1:6866205/151‑1 (MQ=255)
                                                                                 aGCCAGCGCAGGCGAAGCGGGTGAGTCATTCGGTGTCTCCCTTGGTCATGAATGTGTCGCATCGACGCGCCCCCTGTTCCTTCTGACATCAGCCGGCGCCGCGTTGCTCACTTATCAGGGCTGGAAGGCACCGATGAATATCGCCGGGTCg                                                                  <  2:2875306/151‑1 (MQ=255)
                                                                                 aGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCg                                                                  >  2:10093744/1‑151 (MQ=255)
                                                                                 aGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCg                                                                  <  1:5928669/151‑1 (MQ=255)
                                                                                     agagCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGTCGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGAccc                                                              <  2:3879523/151‑1 (MQ=255)
                                                                                            gCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGcgtc                                                       <  2:11006216/151‑1 (MQ=255)
                                                                                             cGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGcgtcg                                                      >  2:6622208/1‑151 (MQ=255)
                                                                                             cGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGcgtcg                                                      >  1:3733290/1‑151 (MQ=255)
                                                                                               aaGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGACGGCCCCGATGAAGATCGCCGGGTCGACCCGCGCGTCGtt                                                    >  2:213107/1‑151 (MQ=255)
                                                                                                aGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTc                                                   >  1:3487283/1‑151 (MQ=255)
                                                                                                  cGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAg                                                 <  2:6257028/151‑1 (MQ=255)
                                                                                                  cGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAg                                                 >  1:2682994/1‑151 (MQ=255)
                                                                                                   gggTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGACGATCGCCGGGTCGACCCGCGCGTCGTTCAgg                                                >  2:1083452/1‑151 (MQ=255)
                                                                                                   gggTGAGTCATGCGGTGTCTCCCATGGTCCTGAAAGGGGCGCATCGACGCGCCCCCAGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAgg                                                <  1:8123313/151‑1 (MQ=255)
                                                                                                    ggTGAGTCATGCGGTGTCTCCCTTGGTCATGACAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGc                                               <  2:1042874/151‑1 (MQ=255)
                                                                                                     gTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCt                                              <  1:7566992/151‑1 (MQ=255)
                                                                                                     gTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCt                                              <  2:8108834/151‑1 (MQ=255)
                                                                                                      tGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTg                                             <  2:6400635/151‑1 (MQ=255)
                                                                                                      tGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTg                                             >  1:10056720/1‑151 (MQ=255)
                                                                                                            aTGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCGCCGATGAAGTTCGACGGGTCGACACGCGCGACGTTCAGGCTGACGTTc                                       >  1:9938093/1‑151 (MQ=255)
                                                                                                             tGCGGGGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTcc                                      >  2:4173875/1‑151 (MQ=255)
                                                                                                                 gtgtCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTg                                  >  1:9512358/1‑151 (MQ=255)
                                                                                                                  tgtCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGc                                 >  1:776898/1‑151 (MQ=255)
                                                                                                                    tctcCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCAt                               <  1:10393694/151‑1 (MQ=255)
                                                                                                                     ctcCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCAtg                              >  2:5463246/1‑151 (MQ=255)
                                                                                                                      tcCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCAtgt                             >  1:3140111/1‑151 (MQ=255)
                                                                                                                         cTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCg                          <  2:10651662/151‑1 (MQ=255)
                                                                                                                          ttGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCgg                         <  2:3065217/151‑1 (MQ=255)
                                                                                                                          ttGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCgg                         <  1:8057012/151‑1 (MQ=255)
                                                                                                                           tGGTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGt                        >  2:785826/1‑151 (MQ=255)
                                                                                                                             gTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTcc                      >  1:7182153/1‑151 (MQ=255)
                                                                                                                             gTCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTcc                      >  1:4144750/1‑151 (MQ=255)
                                                                                                                              tCATGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCTTGTGCGGTCCg                     >  2:2568081/1‑151 (MQ=255)
                                                                                                                                aTGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGt                   <  1:7890569/151‑1 (MQ=255)
                                                                                                                                aTGAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACATCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCAGACGTTACAGTGCATGTGCGGTCCGGt                   >  1:4951257/1‑151 (MQ=255)
                                                                                                                                  gAAAGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTgg                 >  2:7601550/1‑151 (MQ=255)
                                                                                                                                   aaaGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGc                >  2:116045/1‑151 (MQ=255)
                                                                                                                                   aaaGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGc                >  2:9380929/1‑151 (MQ=255)
                                                                                                                                    aaGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGcc               >  2:9586446/1‑151 (MQ=255)
                                                                                                                                    aaGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGcc               >  2:4555247/1‑151 (MQ=255)
                                                                                                                                     aGGGGCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGACGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGATCCAGTGCATGTGCGGTCCGGTGGccc              >  2:4367397/1‑151 (MQ=255)
                                                                                                                                      ggggCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCt             >  1:5051810/1‑151 (MQ=255)
                                                                                                                                      ggggCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCt             >  1:3358493/1‑151 (MQ=255)
                                                                                                                                      ggggCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCt             >  1:10708126/1‑151 (MQ=255)
                                                                                                                                       gggCGCATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTg            <  1:4438252/151‑1 (MQ=255)
                                                                                                                                          cgcATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCg         <  1:9717586/151‑1 (MQ=255)
                                                                                                                                           gcATCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCgg        >  2:1894228/1‑151 (MQ=255)
                                                                                                                                              tCGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTgg     >  1:8359972/1‑151 (MQ=255)
                                                                                                                                               cGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGgc    >  2:871172/1‑151 (MQ=255)
                                                                                                                                               cGACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGgc    >  2:4809438/1‑151 (MQ=255)
                                                                                                                                                gACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGgcg   <  1:6564272/151‑1 (MQ=255)
                                                                                                                                                gACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGgcg   <  1:9157438/151‑1 (MQ=255)
                                                                                                                                                gACGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGgcg   >  2:2837905/1‑151 (MQ=255)
                                                                                                                                                 aCGCGCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGgcgc  >  1:5316401/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                  
TCGCCGCTGGTGAGCAGGGAGGCGAGCGGGCCGGGGAAGAAGACGAAGCCCAGGCCGAGGACCACGAACAGTGCCGAGCACAGCCAGAGCAGGCGAAGCGGGTGAGTCATGCGGTGTCTCCCTTGGTCATGAAAGGGGCGCATCGACGCGCCCCCCTGTTCCTTCTGACCTCAGCCGGCGCCGCGTTGCTCACTTCTCAGGGCTGGAAGGCACCGATGAAGATCGCCGGGTCGACCCGCGCGTCGTTCAGGCTGACGTTCCAGTGCATGTGCGGTCCGGTGGCCCTGCCGGTGGCGC  >  NC_008463/1280562‑1280858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: