| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,594,625 | Δ1 bp | coding (1041/1350 nt) | nuoF ← | NADH‑quinone oxidoreductase subunit NuoF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,594,622 | 0 | G | . | 98.4% | 2445.2 / 37.8 | 516 | coding (1044/1350 nt) | nuoF | NADH‑quinone oxidoreductase subunit NuoF |
| Reads supporting (aligned to +/- strand): ref base G (5/3); new base . (247/257); total (255/261) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 543 total aligned reads displayed.
CCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAGGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGGAAACCATGTTGATGCTGTCGTCCACCGCCATGGGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGCTGCCAG > NC_008463/2594471‑2594769 | aGTTGGTTGCGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTAGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAggg < 2:2767247/151‑1 (MQ=255) aGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAggg < 1:3810367/151‑1 (MQ=255) gTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAggga < 2:7945325/151‑2 (MQ=255) ttGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAgggaa < 2:1470202/151‑3 (MQ=255) tGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGaaa > 2:5989418/1‑151 (MQ=255) cTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAAcc < 1:9505169/151‑1 (MQ=255) ttGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCa > 1:10982009/1‑151 (MQ=255) ttGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCa < 1:136286/151‑1 (MQ=255) tGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCAt > 1:10670590/1‑151 (MQ=255) tGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCAt > 1:356059/1‑151 (MQ=255) tGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCAt < 2:2480242/151‑1 (MQ=255) gAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATg > 1:8429587/1‑151 (MQ=255) cgggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACTCTCCACGGCAGGCCGTCGCGGC‑TGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGt < 2:7599464/150‑1 (MQ=255) aGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGt < 1:4699803/151‑1 (MQ=255) aGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGt < 1:2384415/151‑1 (MQ=255) ggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTg < 1:3490958/151‑1 (MQ=255) gTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGa < 2:3218390/151‑1 (MQ=255) ctcGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATg < 1:7740035/151‑1 (MQ=255) cGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCt < 2:5741360/151‑1 (MQ=255) gAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTg > 2:4366913/1‑151 (MQ=255) aGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGACACCATGTTGATGCTgt > 1:11148479/1‑151 (MQ=255) cGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTgtcgtc > 2:4870298/1‑151 (MQ=255) gCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTcc < 2:5963173/151‑1 (MQ=255) gggCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCGGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAcc < 2:1101064/151‑1 (MQ=255) cTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGcc < 1:276629/151‑1 (MQ=255) cTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGcc < 2:8808092/151‑1 (MQ=255) tGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCa < 2:10796813/151‑1 (MQ=255) aggCCGTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCAAGTTGATGCTGTCGTCCACCGCCa < 1:9859426/150‑1 (MQ=255) ggCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAt > 1:2144517/1‑151 (MQ=255) ttCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATggcc < 1:6524319/151‑3 (MQ=255) cGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATggccag < 1:7870876/151‑5 (MQ=255) gCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAgg < 1:3969875/151‑1 (MQ=255) cACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGcc > 2:7439020/1‑151 (MQ=255) cACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGcc < 2:8098979/151‑1 (MQ=255) ctctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTg > 2:722016/1‑151 (MQ=255) tctAGGGCGCGCAGCAGCTTCACGCTCCTCGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGTCTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGc < 2:9293813/151‑1 (MQ=255) tctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGc > 1:5889817/1‑151 (MQ=255) ctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGcc > 1:4409093/1‑151 (MQ=255) aGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCa < 1:1150226/151‑1 (MQ=255) gggCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCCCCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCAt > 1:1983154/1‑151 (MQ=255) gcgcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATcc < 1:2925418/151‑1 (MQ=255) cgcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCg < 2:8600445/151‑1 (MQ=255) cgcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCg < 2:2060138/151‑1 (MQ=255) agcagcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGTACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGc > 2:3370695/1‑151 (MQ=255) agcagcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGc > 1:721499/1‑151 (MQ=255) agcagcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGc > 2:6995391/1‑151 (MQ=255) agcagcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGc > 1:9428714/1‑151 (MQ=255) gcagcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGcc < 2:9405912/151‑1 (MQ=255) cagcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCg < 2:2936833/151‑1 (MQ=255) cagcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCg > 1:1202757/1‑151 (MQ=255) cTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGAcc > 2:7793132/1‑151 (MQ=255) cTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGAcc > 1:8797966/1‑151 (MQ=255) ttCCCGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt < 2:4513837/151‑1 (MQ=255) ttCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt < 2:5208012/151‑1 (MQ=255) tCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCtt < 2:2661267/151‑1 (MQ=255) aCGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTgg < 1:10125089/151‑1 (MQ=255) cGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGc < 2:10579562/151‑1 (MQ=255) cGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGc < 1:42754/151‑1 (MQ=255) gCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCg < 1:8257525/151‑1 (MQ=255) tCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGAt < 1:5379857/151‑1 (MQ=255) tCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGAt > 1:5794646/1‑151 (MQ=255) ccACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATg > 1:6185352/1‑151 (MQ=255) cGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATgccg < 2:6323165/151‑1 (MQ=255) ggCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGc < 1:10918274/151‑1 (MQ=255) tCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACa > 1:10024947/1‑151 (MQ=255) cgcgGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACAt < 2:9709680/151‑1 (MQ=255) cgcgGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACAt > 1:2290162/1‑151 (MQ=255) cagggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTgcg < 2:4713226/149‑1 (MQ=255) agggggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTgcgc < 2:6887103/150‑1 (MQ=255) gggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATc < 2:1281326/151‑1 (MQ=255) ggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATcc < 1:6900793/151‑1 (MQ=255) ggTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATcc < 2:2158857/151‑1 (MQ=255) cACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGt < 2:8205452/151‑1 (MQ=255) ccAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGC‑TGGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGc < 2:5433952/151‑1 (MQ=255) cGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGACACCAGGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCgg > 2:421251/1‑151 (MQ=255) cAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGa < 1:5141225/151‑1 (MQ=255) aCTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAg > 1:7672737/1‑151 (MQ=255) tCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGa > 2:3671137/1‑151 (MQ=255) cgcgGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGaa > 1:1552057/1‑151 (MQ=255) cgGGCGAAGAACTCTTCCATGTTGCGCCGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGc < 2:4972075/151‑1 (MQ=255) cgGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGc < 1:1840696/151‑1 (MQ=255) gggCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGACGcc > 2:9013431/1‑151 (MQ=255) gggCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGcc < 1:10298162/151‑1 (MQ=255) gaagaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTa < 1:8548789/151‑1 (MQ=255) aagaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTAc > 2:3953061/1‑151 (MQ=255) aagaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTAc > 1:3186974/1‑151 (MQ=255) aagaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGGGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGtcc > 2:1029321/1‑149 (MQ=255) agaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGACGCCGGTAcc > 1:4347436/1‑151 (MQ=255) agaaCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTAcc > 2:190903/1‑151 (MQ=255) gaaCTCTTCCATGTTGCGCAGCA‑GGGCAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCAGCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCg > 1:10579928/1‑151 (MQ=255) aCTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGgc < 1:4933086/151‑1 (MQ=255) ctctTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGgcg > 1:5622651/1‑151 (MQ=255) tctTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGgcgc > 2:5543931/1‑151 (MQ=255) ttCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGcgccg < 2:6540738/151‑1 (MQ=255) ccATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCTGTACCGGCgccgcc < 1:4818230/151‑1 (MQ=255) cATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGccgccg > 1:371076/1‑151 (MQ=255) tGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCggg > 2:6803168/1‑151 (MQ=255) gTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGc > 1:3361643/1‑151 (MQ=255) gTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGc > 1:7416603/1‑151 (MQ=255) cagca‑gGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGCTGCCAg > 1:8335215/1‑151 (MQ=255) | CCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAGGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGGAAACCATGTTGATGCTGTCGTCCACCGCCATGGGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCTGCGCATCCAGGTGCTCCGGGAGCAGGAAGCCGGTACCGGCGCCGCCGGGCTGCCAG > NC_008463/2594471‑2594769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |