| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,787,871 | Δ1 bp | pseudogene (949/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,787,871 | 0 | A | . | 98.9% | 1682.3 / 9.9 | 350 | pseudogene (949/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base . (170/174); minor base G (1/3); total (171/179) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 350 total aligned reads displayed.
TGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑G‑TGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCT > NC_008463/2787737‑2788003 | cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaag > 2:960287/1‑151 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaag < 1:1120719/151‑1 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑Tgaagaag < 1:6136160/151‑1 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcct < 2:9748066/151‑2 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAAcctggt > 2:6935828/1‑147 (MQ=255) cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCtggtg < 1:8217873/151‑1 (MQ=255) gCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGa < 1:1382276/151‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGaa < 2:7433368/151‑1 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAg > 2:8152041/1‑151 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAg > 2:11106450/1‑151 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAg > 1:6103282/1‑151 (MQ=255) agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAgg > 1:100995/1‑151 (MQ=255) agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAgg > 1:6618631/1‑151 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggc < 1:8292266/151‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggc < 2:3106613/151‑1 (MQ=255) ccGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAggcgcggcg > 2:2001896/1‑151 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt > 2:943984/1‑151 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt > 2:9240977/1‑151 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt < 1:8494359/151‑1 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCAGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGAC‑ACGGCCGTGGCCACGG‑TGAAGCAGCA‑CCTGGTGGAAGGCGCGGCGCt < 2:1720050/151‑1 (MQ=255) ggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg < 1:6561554/151‑1 (MQ=255) ggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg < 2:3959988/151‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt < 1:1971504/151‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt < 2:663984/151‑1 (MQ=255) tGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGAt < 2:4993734/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGCA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 1:2548384/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc > 1:10889769/1‑151 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 1:3307536/151‑1 (MQ=255) cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgc < 2:8377055/151‑1 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg < 1:5539239/148‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 2:426832/149‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 2:4630349/149‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 1:7285075/149‑1 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg < 1:7621284/150‑1 (MQ=255) cgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGct > 1:6985711/1‑151 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc < 1:9230169/149‑1 (MQ=255) ggCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc > 1:2283112/2‑151 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt > 1:10038679/1‑151 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt < 1:7384202/151‑1 (MQ=255) gcgcCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTc < 1:377354/151‑1 (MQ=255) ccTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc > 1:1626287/1‑151 (MQ=255) ccTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc < 1:2167659/151‑1 (MQ=255) cTGGAGGAGATCAACAGGACCCTGC‑CCAAGGGGTTAAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg > 2:1551029/1‑151 (MQ=255) ggaggaGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc < 1:9465625/151‑1 (MQ=255) aggagATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCaa > 2:7754123/1‑151 (MQ=255) gagaTCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACa < 1:8975948/151‑1 (MQ=255) gagaTCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACa < 1:7763764/151‑1 (MQ=255) tCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcg < 2:5924594/151‑1 (MQ=255) tCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcg > 2:4889192/1‑151 (MQ=255) aCCGGACCCTGC‑CCAAGGTGGTCAAGGCGATAACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc < 2:2574347/151‑1 (MQ=255) aCCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc < 2:8447055/151‑1 (MQ=255) ccGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg > 1:687465/1‑151 (MQ=255) ccGGACCCGGCACA‑AGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGCAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 2:5522108/151‑1 (MQ=255) cGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCACCATCCGCgcgg > 2:8028759/1‑151 (MQ=255) aCCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGgcgc < 1:4761517/151‑1 (MQ=255) aCCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGACAC‑GTTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCTCGCGgcgc > 1:625188/1‑151 (MQ=255) cccTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 2:10142665/151‑1 (MQ=255) ccTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTg < 1:2844023/151‑1 (MQ=255) ccTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTg < 1:3197618/151‑1 (MQ=255) cccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa > 1:4578186/5‑151 (MQ=255) cccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa < 1:4456260/147‑1 (MQ=255) ccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAc < 2:1879722/148‑1 (MQ=255) caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc < 1:10231968/149‑1 (MQ=255) caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc > 1:7830690/3‑151 (MQ=255) aaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg > 2:7756560/2‑151 (MQ=255) aGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGc < 2:10285209/151‑1 (MQ=255) ggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGcca < 1:5305346/151‑1 (MQ=255) ggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAG‑ACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGcca < 1:11082121/151‑1 (MQ=255) ggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccacc < 2:2841431/151‑1 (MQ=255) gtcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCACCATCCGCGCGGCGCTGATCACCGccacca > 2:5362508/7‑151 (MQ=255) gtcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccacca > 1:2901045/7‑151 (MQ=255) caaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatc > 2:3605146/5‑151 (MQ=255) aaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca > 2:5777058/4‑151 (MQ=255) aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatcat > 1:9760568/3‑151 (MQ=255) aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatcat < 1:3064661/149‑1 (MQ=255) ggCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGGTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcctcaac > 2:5406809/2‑149 (MQ=255) cGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATccc < 2:3810138/151‑1 (MQ=255) gATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGATGAA‑CCTGGTGGATGGAGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCg < 2:7462890/151‑1 (MQ=255) aTCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGc < 1:9812530/151‑1 (MQ=255) tCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTACCTGGTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCt < 2:2617205/151‑1 (MQ=255) aCCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt < 2:8871448/151‑1 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc < 1:10404246/151‑1 (MQ=255) cGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCg < 1:5070839/151‑1 (MQ=255) tCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGACGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt < 2:10856995/151‑1 (MQ=255) cTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATg > 1:1727055/1‑151 (MQ=255) tACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc < 2:8584009/151‑1 (MQ=255) aCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCt < 2:6359618/151‑1 (MQ=255) cGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTg > 1:8364351/1‑151 (MQ=255) gACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt > 2:223232/1‑151 (MQ=255) gACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt > 1:5947539/1‑151 (MQ=255) gACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACAGCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt > 1:4316493/1‑151 (MQ=255) aCCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGtt < 1:7498395/151‑1 (MQ=255) ccGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑GCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttc < 2:2332343/151‑1 (MQ=255) cGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttca > 2:3247609/1‑151 (MQ=255) gCACCACCCTGGTGGACCAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcac > 1:461252/1‑151 (MQ=255) gCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcac > 1:3522530/1‑151 (MQ=255) gCACCACCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcac > 1:1950039/1‑151 (MQ=255) caccacCCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcacc > 2:5243207/1‑151 (MQ=255) accaccCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGCA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcacct < 1:8886787/151‑1 (MQ=255) accaccCTGGTGGACAAGG‑CCGTGGCCACGG‑TGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcacct < 2:7113016/151‑1 (MQ=255) | TGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑G‑TGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCT > NC_008463/2787737‑2788003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |