Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084634,829,3150TG24.3% 1050.3 / 88.0 382K8T (AAA→ACA) PA14_RS22165succinate dehydrogenase assembly factor 2
Reads supporting (aligned to +/- strand):  ref base T (44/245);  new base G (91/2);  total (135/247)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 400 total aligned reads displayed.

AACCGAACATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGTATCCGC  >  NC_008463/4829166‑4829465
                                                                                                                                                     |                                                                                                                                                      
  ccGAACATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCa                                                                                                                                                     <  1:493255/151‑1 (MQ=255)
  ccGAACATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGCAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCa                                                                                                                                                     <  2:2587253/151‑1 (MQ=255)
    gAACATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCCGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGt                                                                                                                                                   <  2:3679490/151‑1 (MQ=255)
    gAACATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGt                                                                                                                                                   >  1:10479369/1‑151 (MQ=255)
     aaCATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGtt                                                                                                                                                  <  1:3464671/151‑1 (MQ=255)
      aCATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTc                                                                                                                                                 <  2:10519772/151‑1 (MQ=255)
         tGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCatgtgggt                                                                                                                                              >  1:3666517/1‑144 (MQ=255)
         tGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGGGTTCggg                                                                                                                                              >  1:7540822/1‑150 (MQ=255)
         tGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTgggg                                                                                                                                              >  1:8458829/1‑150 (MQ=255)
           tCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGttt                                                                                                                                            <  2:5526720/151‑1 (MQ=255)
           tCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGttt                                                                                                                                            <  1:3011783/151‑1 (MQ=255)
                gTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCTGCAGGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCt                                                                                                                                       <  2:6897216/151‑1 (MQ=255)
                 tCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCAGGTAGGTTTCATATg                                                                                                                                      >  1:5610129/1‑151 (MQ=255)
                  ccTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGATAGTCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGc                                                                                                                                     <  2:5330995/151‑1 (MQ=255)
                   cTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGcc                                                                                                                                    <  1:11052563/151‑1 (MQ=255)
                    tCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCa                                                                                                                                   <  2:9385365/151‑1 (MQ=255)
                     cGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTCGGTTTCATCTGCCAt                                                                                                                                  >  2:6134936/1‑151 (MQ=255)
                       cACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCAACTGCCATGt                                                                                                                                >  2:2701159/1‑151 (MQ=255)
                          tCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCg                                                                                                                             <  2:1489437/151‑1 (MQ=255)
                          tCCAGCAGCGTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCg                                                                                                                             <  2:6548900/151‑1 (MQ=255)
                           ccAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTAAGTTGGGGTTCATCAGCCAAGTTggg                                                                                                                            >  2:1375222/1‑151 (MQ=255)
                            cagcagCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCggg                                                                                                                           <  1:6517214/151‑1 (MQ=255)
                            cagcagCTTGCGGAAGCGCGCCAGGTCCTCGGCGACCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCggg                                                                                                                           <  2:7717215/151‑1 (MQ=255)
                             agcagcTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTAATAAGCCAAGTTCgggg                                                                                                                          >  2:8258910/1‑150 (MQ=255)
                               cagcTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGctc                                                                                                                        <  1:3083354/151‑1 (MQ=255)
                                  cTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGctcctc                                                                                                                     <  1:4646496/151‑1 (MQ=255)
                                  cTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTGGGGTTGATCATCCATGTTGGGGggcctc                                                                                                                     >  1:980193/1‑151 (MQ=255)
                                   ttGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCg                                                                                                                    <  1:7752119/151‑1 (MQ=255)
                                    tGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGa                                                                                                                   <  1:5268751/151‑1 (MQ=255)
                                    tGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGa                                                                                                                   <  2:3101611/151‑1 (MQ=255)
                                    tGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGa                                                                                                                   <  1:10795491/151‑1 (MQ=255)
                                       ggAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGaaaa                                                                                                                <  2:7747319/151‑1 (MQ=255)
                                       ggAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTAGGTGTAAAGTGCCATGTTAGGGCAGCTCGaaaa                                                                                                                >  2:6182707/1‑151 (MQ=255)
                                        gAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAAc                                                                                                               <  1:7957384/151‑1 (MQ=255)
                                          aGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGc                                                                                                             <  1:2807041/151‑1 (MQ=255)
                                          aGCGCGCCTGGTCCTCGGCGACCAGGCCCGGGAAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGc                                                                                                             <  2:5057912/151‑1 (MQ=255)
                                            cgcgcCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGccc                                                                                                           <  2:5666082/151‑1 (MQ=255)
                                            cgcgcCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGGGTTGGGGGTGAGGTGGCCTGGTCGGGCTGCTCGTCAACGccc                                                                                                           >  2:7623128/1‑151 (MQ=255)
                                             gcgcCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTAATCGTACATGTTAGGGCTCCACGAACAAGcccc                                                                                                          >  2:1415789/1‑150 (MQ=255)
                                             gcgcCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTCGGTTTGATCTGCCATGTTAGGGCGCCGCGAAAACACCCg                                                                                                          >  1:4348080/1‑151 (MQ=255)
                                               gcCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCCTGCCGCGACGGCGGTGCCAGTAGAGTCGTTTGAGTTGGGTTTCAGATGCCAAGTTAGGGCTCCGCGCAAACTCCCGGc                                                                                                        >  2:9772432/1‑151 (MQ=255)
                                               gcCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGc                                                                                                        <  1:7333198/151‑1 (MQ=255)
                                                ccTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTAAGGTCGGTTTAATATGCCATGTTCGGGCGCCGCGGAAAAGCCCGGCa                                                                                                       >  2:3195204/1‑151 (MQ=255)
                                                  tGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTCGGTTTAATATGCCAGGTTCGGGCGGCTCGAAAAACCCCGGCCtt                                                                                                     >  1:2637676/1‑151 (MQ=255)
                                                   ggTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATta                                                                                                    <  1:4057166/151‑1 (MQ=255)
                                                       cTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTCGGGTTCATCTGCCCGGTTCGGGGGCCTCGAAAACGGCCGGCAGTATAgg                                                                                                >  2:7966493/1‑151 (MQ=255)
                                                        tCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCTGTTGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAggg                                                                                               <  1:8745038/151‑1 (MQ=255)
                                                        tCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAggg                                                                                               <  1:1952616/151‑1 (MQ=255)
                                                          ggCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTAAGATGCCATGTACGGGCGACACGAAAAAACCCCGCATTATAtggag                                                                                             >  2:1790460/1‑149 (MQ=255)
                                                          ggCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGGGAGTTGGGTTTGTTATTCCATGTTGGGGGGGCGCGGAAAACCCCGGCAGTATAtgggg                                                                                             >  1:10444952/1‑149 (MQ=255)
                                                                cAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTgcg                                                                                       <  2:8756278/151‑1 (MQ=255)
                                                                cAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTgcg                                                                                       <  2:8529767/151‑1 (MQ=255)
                                                                cAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTCGGGTTCATATGCCATGTTCGGGCTCCTCGAAAACGCCCGGCCTTTTAGGGCGGGTggg                                                                                       >  2:10579909/1‑149 (MQ=255)
                                                                 ccgCCCGGGGAAACCGCCTGCACGAACGTCCCCAGCTGCACCTCCAGGGCCTGCCAGCCGCCTCGGCTGTTCCAGCAGAGCCGATTCAGCTCGGTGTCCTCTGCCTTCACCTTGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTgcgg                                                                                      <  2:7279670/149‑2 (MQ=255)
                                                                  ggCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGGTCGGGGTGATATGCCCGTGTGGGGGGCCGCGGAAAACCCCCGCAGTATAGGGCGGGTGGGCt                                                                                     >  1:5015475/1‑151 (MQ=255)
                                                                  ggCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCAGTTCGGTTTCATATGCCATGTTCGGGCTCCACGAAAACGCCCCGCAGTTTAAGGCGGTTgcgcg                                                                                     >  2:10145202/1‑150 (MQ=255)
                                                                   gCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTc                                                                                    <  1:1063776/151‑1 (MQ=255)
                                                                     ccGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGACTTCGGTTTAAAAATGCATGTTAGGGCGCCACAAAAAAACCCCGCCATATCTGGCGGGTgcgcgaga                                                                                  >  1:1396902/1‑147 (MQ=255)
                                                                     ccGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCAGGTGGGGTTCATCAGCCAAGTTCGGGCGCCTCGAAAAAGCCCGGCCTTATAGGGCGGTTGcgcgcgc                                                                                  >  2:6992033/1‑150 (MQ=255)
                                                                      cGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGaa                                                                                 <  1:5704955/151‑1 (MQ=255)
                                                                      cGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGaa                                                                                 <  1:10878388/151‑1 (MQ=255)
                                                                       gggTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAAt                                                                                <  1:8344112/151‑1 (MQ=255)
                                                                        ggTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATg                                                                               <  2:6718942/151‑1 (MQ=255)
                                                                        ggTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATg                                                                               <  1:6973213/151‑1 (MQ=255)
                                                                          tAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGgc                                                                             <  1:4147365/151‑1 (MQ=255)
                                                                          tAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGgc                                                                             <  1:6652728/151‑1 (MQ=255)
                                                                          tAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCAGTTCGGTTTAATCTGCCCAGTTCGGGCTCCGCGAAAACGCCCGGCATTATAGGGCGGTTTCGCTCGCATGgc                                                                             >  2:8360312/1‑151 (MQ=255)
                                                                              cctcctGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCgg                                                                         <  1:11117057/151‑1 (MQ=255)
                                                                              cctcctGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCTGTTGGGGGTGAACGGACATGGTGGGGCGCCGCGAAAAAGCCCGGGAGTATATGGCGGGTGGGCGCGGATGGCGCgg                                                                         >  1:10188824/1‑151 (MQ=255)
                                                                               ctcctGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCAGTTCGGGTTGATCTTCCAAGTTCGGGCGCCTCGAAAACCCCCCGCCATATAGGGCGGTTGGGCTCGAATTGCGCGGc                                                                        >  2:420201/1‑151 (MQ=255)
                                                                                 cctGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGccc                                                                      <  1:4732806/151‑1 (MQ=255)
                                                                                    gCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGAt                                                                   <  2:8798575/151‑1 (MQ=255)
                                                                                     cACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCAGTTAGGGTTCATCAGCCAATTTGGGGCGACACGAAAAAGCCCCGCAATATAGGGCGGGTGGGCGCGCAATGCGCGGccccaag                                                                  >  2:2044182/1‑147 (MQ=255)
                                                                                       cGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGAc                                                                <  1:9395371/151‑1 (MQ=255)
                                                                                        gAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTGGAGTTCGGTTTAATATGCCAGGTTAGGGCTCCACGAAAAAGCCCGCCAGTATATGGCGGTTGCGCACGAATGGCGCGGCCCGCTGGCg                                                               >  2:5375041/1‑151 (MQ=255)
                                                                                         aaaGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTTAGTTAGGTTTAATAGTCCCAGTTAGGGGTCCGCGAAAAAGCCCCGCATTATAGGGCGGGTGGGCTCGAAATGCGCGGCCCGCTGTCgt                                                              >  2:4565596/1‑150 (MQ=255)
                                                                                                   gcagcaCATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTc                                                    <  1:6432892/151‑1 (MQ=255)
                                                                                                    cagcaCATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTcc                                                   <  2:8162550/151‑1 (MQ=255)
                                                                                                            ccAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTGAGTTCGGGTTCATAATCCATGGTAGGGCTCCTCGAAAAACCCCCGCCTTATATGGCGGGTGCGCTCGAATTGCGCGGCCCGATGGAGAGGCGGAGCACCGCCcgcgg                                           >  2:10819936/1‑150 (MQ=255)
                                                                                                             cAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTc                                          <  2:2833706/151‑1 (MQ=255)
                                                                                                                  ccAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGccc                                     <  2:6459096/151‑1 (MQ=255)
                                                                                                                  ccAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTGTCAGTTAGGTGTCATCAGCCCTGTTCGGGGTGCTCGAAAACGCCCGGCCTTATAGGGCGGGTGGGCTCGAATTGCGCGGCCCGCTGACGAGGCGGCGCGCCGCCGGCGTCCGccc                                     >  2:11053470/1‑151 (MQ=255)
                                                                                                                   cAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCt                                    <  2:3420348/151‑1 (MQ=255)
                                                                                                                    aGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCtt                                   <  2:5303231/151‑1 (MQ=255)
                                                                                                                       aTGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGt                                <  2:10356535/151‑1 (MQ=255)
                                                                                                                              gACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTg                         <  1:1487693/151‑1 (MQ=255)
                                                                                                                               aCGGCTGTGCCAGTAGAGTCGTGTGAGTTGGGGTTCAACTTCCAAGTTCGGGCTCCACCAAAAACCCCGGCCATATATGGGGGGTTCGCGAGAAATGGGCGGGCCGCTGACCAGGCGTCGCTCCCCCCGCGTCCGCCCGTGGTGGTAttta                        >  2:9909162/1‑149 (MQ=255)
                                                                                                                                cGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGcc                       <  1:3846839/151‑1 (MQ=255)
                                                                                                                                  gCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCg                     <  2:5763445/151‑1 (MQ=255)
                                                                                                                                   cTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCgg                    <  1:6783540/151‑1 (MQ=255)
                                                                                                                                          aGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCa             <  1:600061/151‑1 (MQ=255)
                                                                                                                                            tAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAg           <  1:9049672/151‑1 (MQ=255)
                                                                                                                                             agagTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAgg          <  2:9018621/151‑1 (MQ=255)
                                                                                                                                               agTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGt        <  1:1744743/151‑1 (MQ=255)
                                                                                                                                               agTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGt        >  1:9197122/1‑151 (MQ=255)
                                                                                                                                                gTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGTa       <  2:889054/151‑1 (MQ=255)
                                                                                                                                                   gTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGTATcc    <  2:4735284/151‑1 (MQ=255)
                                                                                                                                                    tttCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGTATCcg   <  1:9938915/151‑1 (MQ=255)
                                                                                                                                                    tttCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCAGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGTATCcg   >  1:2518298/1‑151 (MQ=255)
                                                                                                                                                     ttCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGTATCcgc  >  2:3613995/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
AACCGAACATGTCCTGGTCCTCGCACTCCAGCAGCTTGCGGAAGCGCGCCTGGTCCTCGGCGTCCAGGCCCGGGTAAACCTCCTGCACGAAAGGCACCAGCAGCACATCCAGTTCCAGCATGCCGCGACGGCTGTGCCAGTAGAGTCGTTTCAGTTCGGTTTCATCTGCCATGTTCGGGCTCCTCGAAAACGCCCGGCATTATAGGGCGGTTGCGCTCGAATGGCGCGGCCCGATGACGAGGCGTCGCTCCGCCGGCGTCCGCCCTTGGTCGTATTGCCCGGCAAACCAAGGGTATCCGC  >  NC_008463/4829166‑4829465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑