Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084635,461,1350AG33.6% 562.8 / inf 517D1240D (GAT→GACPA14_RS25000MBG domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base A (148/184);  new base G (70/98);  total (225/292)
Fisher's exact test for biased strand distribution p-value = 5.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 524 total aligned reads displayed.

GGTTGATGCCGTACACGCCGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGAACCAGGCCGCCGCCA  >  NC_008463/5460987‑5461285
                                                                                                                                                    |                                                                                                                                                      
 gTTGATGCCGTACACGCCGACTTTCTCGCCAGCCACGCGGCTCAGGCTGCCTCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCg                                                                                                                                                     <  1:885853/151‑1 (MQ=255)
 gTTGATGCCGTACACGCCGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCg                                                                                                                                                     <  1:1501145/151‑1 (MQ=38)
  ttGATGCCGTACACGCCGACGTTCTCGCCAGCCACGCGGCTCAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCgg                                                                                                                                                    >  2:10259318/1‑151 (MQ=18)
  ttGATGCCGTACACGCCGACGTTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCgg                                                                                                                                                    <  1:2092207/151‑1 (MQ=255)
  ttGATGCCGTACACGCCGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACATGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCgg                                                                                                                                                    >  1:8325227/1‑151 (MQ=255)
   tGATGCCGTACACGCCGACGTTCTCGCCAGCCACGCGGCTCAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGc                                                                                                                                                   <  2:11105504/151‑1 (MQ=18)
    gATGCCGTACACGCCGACTTTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCg                                                                                                                                                  <  2:1225929/151‑1 (MQ=255)
        ccctACACGCCCACGTTCTCGCCAGCCACGCGGCTCAGGCTGCCGCCGTTGAGCACGGCCCCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATca                                                                                                                                              <  2:429369/148‑1 (MQ=255)
        ccGTACACGCCGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGATGACCTGGAACGACAGGCTCCTGTCGGCAACGCCGAAGACCTAGGTATTGGCGTCGGCGATca                                                                                                                                              >  1:10756023/1‑151 (MQ=11)
            acacGCCGACGTTCTCGCCAGCCACGCGGCTCAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACAtt                                                                                                                                          <  2:5099832/151‑1 (MQ=16)
              acGCCGCCAGTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTca                                                                                                                                        <  1:7055284/151‑1 (MQ=255)
              acGCCGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTca                                                                                                                                        <  2:1929229/151‑1 (MQ=38)
               cGCCGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTcag                                                                                                                                       <  2:5253869/151‑1 (MQ=38)
                tccGACGTTCTCGCCAGCCACGCGTCTCAGGCTGCCGCCGTTGAGCACGGCTCCGGCGGTTTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTcagc                                                                                                                                      <  2:4822903/150‑1 (MQ=11)
                 ccGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTcagca                                                                                                                                     >  1:344440/1‑151 (MQ=38)
                  cGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCTTCGGCGATCACATTcagcag                                                                                                                                    >  1:3767664/1‑151 (MQ=38)
                    aCATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCATAGACCTTGGTCTTGGCAt                                                                                                                                                       <  2:7581913/130‑1 (MQ=25)
                       ttCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCt                                                                                                                               <  2:5670647/151‑1 (MQ=255)
                         ctcGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTg                                                                                                                             >  2:10942471/1‑151 (MQ=255)
                          tcGCCAGCCACGCGGCTCAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCTCTGACATGGTATGTCAGGCTCGGTTCGGCATCGCCTTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTgg                                                                                                                            <  2:3601854/151‑1 (MQ=11)
                          tcGCCAGCCACGCGGCTCAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGGGCCTTgg                                                                                                                            >  1:4884669/1‑151 (MQ=18)
                            gccagccaCGCGGCTCAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTg                                                                                                                          <  1:787002/151‑1 (MQ=25)
                             ccagccaCGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGa                                                                                                                         <  1:978608/151‑1 (MQ=255)
                              cagccaCGCGGCTCAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGAt                                                                                                                        >  1:6730210/1‑151 (MQ=25)
                              cagccaCGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCGTGGTGAt                                                                                                                        >  1:6223740/1‑151 (MQ=255)
                                 ccccgcgGCTCCGGCTGCCACCGCTGCGCACGGCACCGGCGGTGTCGCCGTTCTTCTGGCCGCTGTCCAGGTAAGTCAGCCTCGGGTCGGCATCGACGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGt                                                                                                                     <  2:7247624/148‑1 (MQ=14)
                                       ggCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGt                                                                                                                     <  1:876882/145‑1 (MQ=255)
                                        tcTCAGGCTGCCACCGTTGAGCACGGCTCCGGCGGTTTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGTTCGGCATCGCCTTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGgtta                                                                                                              <  2:8541457/150‑2 (MQ=255)
                                        gCTCCGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCACTGCCTTGGTGATGGTCAGgttg                                                                                                              <  2:379256/151‑1 (MQ=255)
                                        gCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGgtta                                                                                                              >  2:6818949/1‑150 (MQ=255)
                                          tCAGGCTGCCTCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGgttgtt                                                                                                            <  2:8156837/151‑1 (MQ=255)
                                           cAGGCTGCCGCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGttgttg                                                                                                           >  2:4502248/1‑151 (MQ=255)
                                            aGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGAGCCTTGGTGATGGTCAGGTTATTGc                                                                                                          >  1:7611510/1‑151 (MQ=255)
                                               cTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCt                                                                                                       <  2:8428494/151‑1 (MQ=255)
                                                tGCCGCCGTTGAGCACGGCTCCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTg                                                                                                      <  1:4755407/151‑1 (MQ=255)
                                                 gccgccGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGCGCCTTGGTGATGGTCAGGTTATTGCCCTgg                                                                                                     >  1:4546688/1‑151 (MQ=12)
                                                  ccACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTACGTCAGGCTCGGGTCGGCTTCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGCGCCTTGGTGATGGTCAGGTTATTGCCCTGGt                                                                                                    <  1:9643710/151‑1 (MQ=255)
                                                    gccGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTac                                                                                                  >  1:5871655/2‑150 (MQ=255)
                                                    gccGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACATGGTAAGTCGGGCTCGGGTCGGCCTCGCCGTAGAGCTTGGTCTGTGCATCGGCGATCACATTGAGCAGTGCCTTGGTGTTGGTCTGGTGGTTGCCGTGGttg                                                                                                  >  2:1469566/2‑149 (MQ=14)
                                                    aCCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTaa                                                                                                  <  2:3926005/151‑1 (MQ=255)
                                                     ccGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAg                                                                                                 >  1:6025928/1‑151 (MQ=255)
                                                     ccGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTCTTGCCCTGGTagc                                                                                                 >  1:4372749/1‑149 (MQ=255)
                                                        ttGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCa                                                                                              <  1:8474768/151‑1 (MQ=255)
                                                        ttGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCa                                                                                                                   <  1:6102933/130‑1 (MQ=40)
                                                        ttGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCATAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTATTGCCCTGGTagttca                                                                                              <  2:2360018/151‑6 (MQ=12)
                                                         tGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGAATCGCCGTAGTCCTTGGTCTTGTCGTAGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAg                                                                                             <  1:3970383/151‑1 (MQ=255)
                                                         tGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGACAGCCTCGGTTCGGCATCGCGGTATACCTTGGGCTTGGCATCGGCGATCACATTCAGCAGAGCCTAGGTGATGGTCAGGGGGTTGCCGTGGTGAGCCAg                                                                                             >  2:621955/1‑151 (MQ=14)
                                                          gAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAgg                                                                                            <  2:9475211/151‑1 (MQ=255)
                                                            gctctgCAGCGGCGGTGTAGGTGTTATTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTc                                                                                          <  2:9247407/146‑1 (MQ=11)
                                                             cACGGCACCGGCGGTCTCGCCGTTCTTCAGGCCGCTGACCTGGTATGTCAGGGTCGGCTCGGCTTCGCCGTAGACCTTGGTCTTGGCTTCGGCGATCACATTCAGCAGAGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCa                                                                                         <  1:4436266/151‑1 (MQ=14)
                                                              accgCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCAt                                                                                        <  2:10170087/148‑1 (MQ=255)
                                                                cgctccGGCGGTTTCGCCGTTCTTCAGGCCTCTGACCTGGTATGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAg                                                                                      <  1:9145618/147‑1 (MQ=255)
                                                                   aCCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGAGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTATGACAGGTCATAGATa                                                                                   >  1:6439540/1‑151 (MQ=255)
                                                                        cggTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCt                                                                              >  1:8191037/1‑151 (MQ=40)
                                                                         ggTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCTTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTATTGCCCTGGTagt                                                                                                 <  2:9724713/131‑3 (MQ=255)
                                                                           tgtCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAGGCCAGGTCAGAGTTACCGCTGAc                                                                           >  1:8402870/1‑151 (MQ=255)
                                                                             tCGCCGTTCTTCAGGCCGCTGACCTGGTATGTCAGGCTCGGTTCGGCATCGCCATAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATg                                                                                                                       <  2:3052647/105‑1 (MQ=255)
                                                                             tCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCa                                                                         <  1:10016246/151‑1 (MQ=38)
                                                                             tCGCCGTTCTTCAGGCCGCTGACATGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCa                                                                         <  2:1039318/151‑1 (MQ=38)
                                                                               gCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGa                                                                       <  1:3277583/151‑1 (MQ=17)
                                                                               gCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTAGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGa                                                                       >  1:9007793/1‑151 (MQ=37)
                                                                                  attcttcAGGCCGCTGACCTGGTAGGTCAGGCTCGGGTCGGCGTCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGAccc                                                                    <  2:5499947/150‑1 (MQ=14)
                                                                                   ttcttcAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCTTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGACAGGGTGATGCCCTGGTAACACAGGTCAAAGTTACCGCTGACCAGACCCa                                                                   >  1:2915467/1‑151 (MQ=11)
                                                                                   ttcttcAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCa                                                                   <  1:8551779/151‑1 (MQ=35)
                                                                                   ttcttcAGGCCGCTGACATGGTATGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCa                                                                   <  1:3078744/151‑1 (MQ=18)
                                                                                    tcttcAGGCCGCTGACCTGGTATGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAg                                                                  <  2:8484638/151‑1 (MQ=18)
                                                                                        cAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGAGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGACAGGTCGTAGTTAGCGCTGACCAGACCCAGGccg                                                              >  2:3306953/1‑150 (MQ=255)
                                                                                          ggCCTCTGACTTGGTATGTCAGGCTCGGTTCGGCATCGCCTTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCAcc                                                            <  2:1790836/151‑1 (MQ=255)
                                                                                             cGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCctg                                                         <  1:2573392/151‑1 (MQ=14)
                                                                                                tGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCctgctg                                                      <  2:8717182/151‑1 (MQ=14)
                                                                                                 gACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGa                                                                                                                         >  1:5105919/1‑83 (MQ=255)
                                                                                                   ccTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACAGTAAGCAGTGCCAATCTTATGGTCAGGTTTAAGACCTTGTAAGCCAGGTCTTAGTTAGCGCTGACAAGACCCAGGCCGCCCTGGTGGAt                                                   >  1:4066699/1‑151 (MQ=11)
                                                                                                    cTGGTATGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATc                                                  <  2:9353152/151‑1 (MQ=18)
                                                                                                     tGGTAGGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCg                                                 >  1:8047010/1‑151 (MQ=14)
                                                                                                       gTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGACAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCa                                               >  1:5310957/1‑151 (MQ=25)
                                                                                                          aGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCGTCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAg                                            <  2:6073815/151‑1 (MQ=11)
                                                                                                           gTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGt                                           <  2:4226968/151‑1 (MQ=33)
                                                                                                                 cTCGGGTCGGCTTCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTgg                                                                                                                            <  1:1850675/64‑1 (MQ=25)
                                                                                                                   cGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACg                                   <  1:9389579/151‑1 (MQ=33)
                                                                                                                     ggTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGtt                                 <  1:544264/151‑1 (MQ=33)
                                                                                                                       tCGGCTTCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGtttt                               <  2:6632342/151‑1 (MQ=14)
                                                                                                                       tCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTgg                                                                                                                            <  2:8850529/58‑1 (MQ=35)
                                                                                                                        cGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTc                              <  1:10259318/151‑1 (MQ=31)
                                                                                                                         ggCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCGCCCTGCTGGATCGCATAGTAGCCAACGTTTTCg                             >  2:2010793/1‑151 (MQ=9)
                                                                                                                             tcaccGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGCGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGcc                                                                                               >  1:9976029/4‑81 (MQ=9)
                                                                                                                               gCCATAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATa                                             <  1:171513/129‑1 (MQ=17)
                                                                                                                                ccGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGgaga                      >  1:10594168/1‑151 (MQ=31)
                                                                                                                                 cGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGa                                                                                                                         >  1:10966255/1‑51 (MQ=33)
                                                                                                                                 cGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGCGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTa                                                                                   >  1:1162168/1‑89 (MQ=18)
                                                                                                                                  gTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTaa                                                                                                  >  1:1283553/1‑73 (MQ=34)
                                                                                                                                   tAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGacac                   <  2:10733383/151‑1 (MQ=31)
                                                                                                                                      aCCTTGGTCTTGGCATCGGCGATCACATTCAGCAGAGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGaa                >  2:7053281/1‑151 (MQ=14)
                                                                                                                                       ccTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGAAGCCTACGTTATCGCCCGAGACCCGAAc               >  2:8341740/1‑151 (MQ=255)
                                                                                                                                       ccTTGGTCTTGGCATCGGCGATCACATTCAGCAGAGCCTTGGTGATGGTCAGGTTGTTGCCATGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGt                                           >  2:2710118/1‑123 (MQ=17)
                                                                                                                                        attGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCAAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGAAcc              >  2:2175666/2‑151 (MQ=14)
                                                                                                                                         ttGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGAACCa             <  1:358074/151‑1 (MQ=31)
                                                                                                                                          tGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGAACCAg            <  2:8047010/151‑1 (MQ=31)
                                                                                                                                            gTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCt                                                                              >  2:2955733/1‑83 (MQ=33)
                                                                                                                                              cTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGAACCAGgccg        >  1:1540006/1‑151 (MQ=31)
                                                                                                                                                 ggCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGAACCAGgccgccg     <  1:5579685/151‑1 (MQ=31)
                                                                                                                                                    |                                                                                                                                                      
GGTTGATGCCGTACACGCCGACATTCTCGCCAGCCACGCGGCTCAGGCTGCCACCGTTGAGCACGGCACCGGCGGTGTCGCCGTTCTTCAGGCCGCTGACCTGGTAAGTCAGGCTCGGGTCGGCATCGCCGTAGACCTTGGTCTTGGCATCGGCGATCACATTCAGCAGTGCCTTGGTGATGGTCAGGTTGTTGCCCTGGTAAGCCAGGTCATAGTTACCGCTGACCAGACCCAGGCCACCCTGCTGAATCGCATAGTTGCCTACGTTTTCGCCGGAGACACGAACCAGGCCGCCGCCA  >  NC_008463/5460987‑5461285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: