Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 3,356,495 G→C intergenic (+22/+49) PA14_RS15330 → / ← PA14_RS31420 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,356,4950GC100.0% 1577.0 / NA 403intergenic (+22/+49)PA14_RS15330/PA14_RS31420hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (230/173);  total (230/173)

Only 100 of 412 total aligned reads displayed.

CGCCCGCGAGAAGCTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGGGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGAAA  >  NC_008463/3356347‑3356642
                                                                                                                                                    |                                                                                                                                                   
cgcCCGCGAGAAGCTGGCGCCGATCGTCAAGGGTGTCAACGAGACCGTGCCGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGACCTGGAATAAGGTTCTCCTCCGGCAAAAGGgcgc                                                                                                                                                   >  2:7972805/1‑151 (MQ=255)
    cgcgAGAAGCTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCt                                                                                                                                               >  2:1163718/1‑151 (MQ=255)
        agaAGCTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGa                                                                                                                                           >  1:3337258/1‑151 (MQ=255)
          aaGCTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCCTCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATa                                                                                                                                         <  2:8658665/151‑1 (MQ=255)
             cTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAATAGGGCGCGGCTCCGATACTg                                                                                                                                      >  2:1769325/1‑151 (MQ=255)
             cTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTg                                                                                                                                      <  1:8077197/151‑1 (MQ=255)
             cTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTg                                                                                                                                      <  1:7694864/151‑1 (MQ=255)
              tGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTgg                                                                                                                                     <  2:29776/151‑1 (MQ=255)
                  gcAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCcg                                                                                                                                 >  2:9564554/1‑151 (MQ=255)
                   cAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCcgc                                                                                                                                >  1:7325359/1‑151 (MQ=255)
                   cAGAGCGTCAAGGGTTTCAACGAGACCGTGCTGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAAATGGAAGAAGGTTATCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCcgc                                                                                                                                <  2:9094120/151‑1 (MQ=255)
                     gATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCgcgc                                                                                                                              >  1:6770466/1‑151 (MQ=255)
                         gTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCtt                                                                                                                          >  1:3653111/1‑151 (MQ=255)
                          tCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCttt                                                                                                                         >  1:8240141/1‑151 (MQ=255)
                           cAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATATGGGTCTCCTCCGGCTATAGGGCGCGGCTCCGATACTGGCCCGCGCCCtttt                                                                                                                        >  1:1466125/1‑151 (MQ=255)
                           cAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCtttt                                                                                                                        >  1:9666320/1‑151 (MQ=255)
                            aaGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCttttt                                                                                                                       >  2:5266900/1‑151 (MQ=255)
                            aaGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCttttt                                                                                                                       <  2:10121233/151‑1 (MQ=255)
                            aaGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCtgttt                                                                                                                       >  2:1138259/1‑151 (MQ=255)
                              gggTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCa                                                                                                                     <  1:9223383/151‑1 (MQ=255)
                              gggTTTCAACGAGACCGTGCAGTTCAAGACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACAGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCa                                                                                                                     <  1:9046900/151‑1 (MQ=255)
                                   tCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGc                                                                                                                <  1:5959443/151‑1 (MQ=255)
                                       cGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTGTCATTCGCCCAg                                                                                                            >  2:4586523/1‑151 (MQ=255)
                                        gagaCCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGc                                                                                                           >  1:7035367/1‑151 (MQ=255)
                                         agaCCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGcc                                                                                                          >  2:5293619/1‑151 (MQ=255)
                                          gaCCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCcg                                                                                                         >  1:4372937/1‑151 (MQ=255)
                                           aCCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCcgc                                                                                                        >  1:10367654/1‑151 (MQ=255)
                                             cGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCgcgc                                                                                                      >  2:6677022/1‑151 (MQ=255)
                                              gTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCTATAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCCTTCGCCCAGCCGCGcc                                                                                                     >  1:516735/1‑151 (MQ=255)
                                               tGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGccc                                                                                                    >  2:3317573/1‑151 (MQ=255)
                                                gCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCg                                                                                                   <  2:6955085/151‑1 (MQ=255)
                                                 cAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCgg                                                                                                  >  1:9244593/1‑151 (MQ=255)
                                                 cAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCgg                                                                                                  >  2:1728860/1‑151 (MQ=255)
                                                    ttCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCg                                                                                               >  1:11018578/1‑151 (MQ=255)
                                                    gtCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAATGGGCGCGGCTCCGATACTGTCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCg                                                                                               >  1:5529343/2‑151 (MQ=255)
                                                       aaTACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTc                                                                                            >  1:10264806/1‑151 (MQ=255)
                                                        aTACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCg                                                                                           >  1:6430129/1‑151 (MQ=255)
                                                           ccGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGccc                                                                                        >  1:7605338/1‑151 (MQ=255)
                                                             gCTCTGCACGCCCTCAGTCATACCGGGTGGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCATTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTc                                                                                      <  2:3529871/151‑1 (MQ=255)
                                                             gCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTc                                                                                      <  2:2375633/151‑1 (MQ=255)
                                                                ctGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCggg                                                                                   <  1:4721901/151‑1 (MQ=255)
                                                                 tGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGa                                                                                  >  1:10970275/1‑151 (MQ=255)
                                                                        cATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGACCTGGAATCAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTg                                                                           <  2:3955917/151‑1 (MQ=255)
                                                                         aTCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTgc                                                                          >  1:6371759/1‑151 (MQ=255)
                                                                            aGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTgccgc                                                                       >  2:1902398/1‑151 (MQ=255)
                                                                            aGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTgccgc                                                                       >  2:592319/1‑151 (MQ=255)
                                                                                aTACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGc                                                                   >  2:10864668/1‑151 (MQ=255)
                                                                                 tACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAATGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGcc                                                                  >  1:3140512/1‑151 (MQ=255)
                                                                                   ccGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAg                                                                >  2:8830079/1‑151 (MQ=255)
                                                                                    cGGGTTGAAACGCCAGGAAGAGAGCAAAGCCGAACTGGAATAAGGTTCTCCTCCGGCAATAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGt                                                               >  1:6616281/1‑151 (MQ=255)
                                                                                     gggTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCACAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTGTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGtt                                                              >  2:10363657/1‑151 (MQ=255)
                                                                                      ggTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTc                                                             <  1:8543554/151‑1 (MQ=255)
                                                                                       gTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCa                                                            >  1:8921799/1‑151 (MQ=255)
                                                                                         tGAAACGCCAGGAAGAGAGCACAGCAGAACTGGAATAAGGGTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCAcc                                                          <  2:2220776/151‑1 (MQ=255)
                                                                                            aaCGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCAGTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGt                                                       <  1:3883154/151‑1 (MQ=255)
                                                                                              cGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTgc                                                     >  1:3770507/1‑151 (MQ=255)
                                                                                                 cAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCa                                                  >  2:9353261/1‑151 (MQ=255)
                                                                                                 cAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCa                                                  >  1:9984894/1‑151 (MQ=255)
                                                                                                 cAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCa                                                  >  2:2085700/1‑151 (MQ=255)
                                                                                                   ggAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCaga                                                >  1:10577752/1‑151 (MQ=255)
                                                                                                   ggAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCaga                                                <  2:436238/151‑1 (MQ=255)
                                                                                                     aaGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGc                                              >  1:1955068/1‑151 (MQ=255)
                                                                                                     aaGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGc                                              <  2:6080841/151‑1 (MQ=255)
                                                                                                      agagagCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCa                                             >  2:9422729/1‑151 (MQ=255)
                                                                                                       gagagCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAg                                            >  2:8945738/1‑151 (MQ=255)
                                                                                                            cacaGCCGAACTTGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGTGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTtgtg                                       <  2:735485/151‑1 (MQ=255)
                                                                                                              caGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTgcg                                     <  2:7528064/151‑1 (MQ=255)
                                                                                                               aGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTgcgc                                    >  1:1250985/1‑151 (MQ=255)
                                                                                                                 ccGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCg                                  >  2:7822846/1‑151 (MQ=255)
                                                                                                                  cGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCgg                                 >  1:794724/1‑151 (MQ=255)
                                                                                                                  cGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCgg                                 >  2:7455433/1‑151 (MQ=255)
                                                                                                                  cGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCgg                                 >  1:811819/1‑151 (MQ=255)
                                                                                                                     aCTGGAATACGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACa                              <  2:1561943/151‑1 (MQ=255)
                                                                                                                     aCTGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACa                              >  2:5768925/1‑151 (MQ=255)
                                                                                                                       tGGAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAgc                            >  2:2612117/1‑151 (MQ=255)
                                                                                                                        ggAATAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCCGAGCAGTTGTGCGCCGGACAgcg                           >  1:8789585/1‑151 (MQ=255)
                                                                                                                          aaTCAGGTTCTCCTCCGGCAACAGGGCGCGGCTCCGATACTGGCCCGCGCCCTATTTCAATCGCCCACCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGGGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGcc                         <  2:2706010/151‑1 (MQ=255)
                                                                                                                          aaTAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGcc                         >  2:3132572/1‑151 (MQ=255)
                                                                                                                          aaTAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGcc                         >  1:10748202/1‑151 (MQ=255)
                                                                                                                          aaTAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGcc                         <  1:10844974/151‑1 (MQ=255)
                                                                                                                           ctAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTTGCCCGCGCCCATTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCTCCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCg                        <  1:1653134/150‑1 (MQ=255)
                                                                                                                           aTAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCg                        <  1:6286932/151‑1 (MQ=255)
                                                                                                                           aTAAGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCg                        <  1:2150132/151‑1 (MQ=255)
                                                                                                                             aaGGTTCTCCTCCGGCAATAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTGCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGc                      >  2:3686399/1‑151 (MQ=255)
                                                                                                                             aaGGTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGACCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGc                      <  2:8250404/151‑1 (MQ=255)
                                                                                                                                gTTCTCCTCCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAgg                   <  2:6346608/151‑1 (MQ=255)
                                                                                                                                   ctcctcCGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGgcgc                >  2:7131625/1‑151 (MQ=255)
                                                                                                                                    tcctccGGCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCa               >  1:2631083/1‑151 (MQ=255)
                                                                                                                                        ccGGCAAAAGGGCGCGGCTCCGAGACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGTCGGCAGGCGCACCCa           <  2:8512677/151‑1 (MQ=255)
                                                                                                                                           gCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTc        <  2:4804053/151‑1 (MQ=255)
                                                                                                                                           gCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTc        >  1:453990/1‑151 (MQ=255)
                                                                                                                                           gCAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTATTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTc        <  2:9775946/151‑1 (MQ=255)
                                                                                                                                            cAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCg       <  1:10146269/151‑1 (MQ=255)
                                                                                                                                            cAAAAGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGGTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCg       >  1:3833247/1‑151 (MQ=255)
                                                                                                                                               aaGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGa    <  1:2499313/151‑1 (MQ=255)
                                                                                                                                               aaGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGa    <  2:3851860/151‑1 (MQ=255)
                                                                                                                                                aGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGaa   >  2:5101678/1‑151 (MQ=255)
                                                                                                                                                aGGGCGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGGGGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGaa   <  1:5686997/151‑1 (MQ=255)
                                                                                                                                                 gggcgCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGaaa  <  2:11192831/151‑1 (MQ=255)
                                                                                                                                                 gggcgCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGaaa  <  2:10635998/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CGCCCGCGAGAAGCTGGCGCAGATCGTCAAGGGTTTCAACGAGACCGTGCAGTTCAATACCGCTCTGCACGCCATCAGTCATACCGGGTTGAAACGCCAGGAAGAGAGCACAGCCGAACTGGAATAAGGTTCTCCTCCGGCAAAAGGGGGCGGCTCCGATACTGGCCCGCGCCCTTTTTCATTCGCCCAGCCGCGCCCGGCCGCTCGCCCTCGGGACGCGGTGCCGCCGGCCAGTTCACCGGTGCGCAGAGCAGTTGTGCGCCGGACAGCGCCGGCAGGCGCACCCATTCGGGAAA  >  NC_008463/3356347‑3356642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑