BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	3,515,863	T→C	intergenic (+617/+267)	PA14_RS16005 → / ← PA14_RS16010	AAA family ATPase/DUF4354 family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	3,515,863	0	T	C	100.0%	1140.2 / NA	306	intergenic (+617/+267)	PA14_RS16005/PA14_RS16010	AAA family ATPase/DUF4354 family protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/181); total (125/181)

Only 100 of 306 total aligned reads displayed.

GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010

      aGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCa                                                                                                                                              >  2:286737/1‑151 (MQ=255)

       gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCaa                                                                                                                                             <  1:9702178/151‑1 (MQ=255)

        ccccTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAAc                                                                                                                                            >  2:383524/1‑151 (MQ=255)

        ccccTCCCTAAGCCATAGCCCTTCCCCAGACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAc                                                                                                                                            <  2:3074528/151‑1 (MQ=255)

            tccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctc                                                                                                                                        <  1:1442404/151‑1 (MQ=255)

            tccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTGTGGAATGTGGTGTTGGGCCTCACCCCAAcccac                                                                                                                                        >  1:8326041/1‑149 (MQ=255)

                 aaGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCg                                                                                                                                  <  2:8028026/151‑1 (MQ=255)

                    ccATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCAc                                                                                                                               <  2:7682980/151‑1 (MQ=255)

                     cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCAcg                                                                                                                              <  1:5233334/151‑1 (MQ=255)

                     cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCAcg                                                                                                                              <  2:7283510/151‑1 (MQ=255)

                     cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTGGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCCCCCCAACCccc‑gcccgcccg                                                                                                                              >  1:7053963/1‑151 (MQ=255)

                     cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTAGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCTC‑TCCCGCAcc                                                                                                                              >  2:8336239/1‑150 (MQ=255)

                        aGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCgg                                                                                                                           <  1:1670803/151‑1 (MQ=255)

                         gCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TACCGCACGCggg                                                                                                                          >  2:469848/1‑151 (MQ=255)

                         gCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCCCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCggg                                                                                                                          <  2:1782461/151‑1 (MQ=255)

                           ccTTCCCCAGACCTGAACGGCACACCGATTGCCACCCGCAAAACCACAACCTCCCCCGCAGCGACCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGgag                                                                                                                        <  2:5247468/151‑1 (MQ=255)

                                cccATACCTGCACGGCCCACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGAGCGGTTTTTGGAATGTGGTGTTGGCCCTCCCACCAACCCTC‑TCCCGCACGCGGGAGAgtgg                                                                                                                   <  2:2270659/151‑1 (MQ=255)

                                cccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCAC‑ACCCGCAAGCCGGAGAgggg                                                                                                                   >  2:5943991/1‑151 (MQ=255)

                                   aTACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGcc                                                                                                                <  1:4411097/151‑1 (MQ=255)

                                     cccacaccGGCACACCTAGTGCCACCCGCAAAACCACAACCTCCCCCGCAGCTAACCCCCATAGCTGCGGCATGAGTGTCGCGGATCGGATTATGGAATGTGGTGTTGGCCCACACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCgg                                                                                                              <  2:3313526/144‑1 (MQ=255)

                                      ccTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGAGCGGTTTTTGGACTGTGGTGTTGGCCCGCAACCCAACCCTC‑TCCCGCCAGCGGGAGAGGGGGCCggg                                                                                                             >  2:5061205/1‑151 (MQ=255)

                                       cTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGc                                                                                                            <  1:407589/151‑1 (MQ=255)

                                       cTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGATTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGc                                                                                                            <  1:8574805/151‑1 (MQ=255)

                                        tGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCTC‑ACCCCCCCGCGGGGGGGGGGGGCggggg                                                                                                           >  1:494796/1‑149 (MQ=255)

                                          aaCGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCAC‑GACCGCACCCCGGAGAGGGGGGCGGGCGTg                                                                                                         >  2:1255759/1‑151 (MQ=255)

                                            cGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGCCCGAAACCCCACCCAA‑ACCCCGCCCCGGGAGAGGGGGGGGGGCggggc                                                                                                       >  1:2954842/1‑147 (MQ=255)

                                            cGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTGTTTGGACTGTGGTGTTGGGCCGCAAACCAACCCTC‑TCCCGCACGCGGGAGGGGGGGGCGGGCGttac                                                                                                       >  2:108907/1‑148 (MQ=255)

                                                 cacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑ACCCGCACGCGGGAGAGGGGGCCGGGCGTGCCGtgtg                                                                                                  >  2:5664201/1‑151 (MQ=255)

                                                 cacCAATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTtgtg                                                                                                  <  1:5116610/151‑1 (MQ=255)

                                                    cTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGt                                                                                               <  2:10834511/151‑1 (MQ=255)

                                                     tATTGCCACCCTCAAAACCACAACATCCACCGCTGCTAACCGCAATAGCTGCGGCTTGCGTGTCGAGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGATGGGGCCGGGCGTGCCTTGTGGGTc                                                                                              <  2:925384/151‑1 (MQ=255)

                                                      agtGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCg                                                                                             <  2:8702552/149‑1 (MQ=255)

                                                      aTTGCCACCCGCAAAACCACACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCg                                                                                             <  1:689918/151‑1 (MQ=255)

                                                           cACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAAACCCCAACCCAC‑TCCCGCACGCCGGCGAGGGGGGCGGGCGGGCCGGGGGGGGCGGgcgc                                                                                        >  2:3155591/1‑151 (MQ=255)

                                                           cACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCCACCCGC‑TCCCGCCCGCCGGGGAGGGGGCCGGGCGTGCCGGGTGGGTCgcgggc                                                                                        >  2:7109469/1‑146 (MQ=255)

                                                           cACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCTG‑TCCCGCGCGCGGGGGTGGGGGGCGGGGGGGCCTGGTGGGGCGTgcgc                                                                                        >  2:6861338/1‑151 (MQ=255)

                                                            aCCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGcc                                                                                       <  1:10731028/151‑1 (MQ=255)

                                                             cccGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCct                                                                                      <  1:3657443/151‑1 (MQ=255)

                                                                  aaaaCCACACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctc                                                                                 <  1:8181764/151‑1 (MQ=255)

                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGGGGGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCCACCCTC‑TCCCGCACGCGGGAGTGGGGGGGGGGGGTGGCGGGGGGGGCGGGGGCctggctc                                                                                 >  2:6901301/1‑151 (MQ=255)

                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCACCCCAACCCGA‑TCCCGCCCCCGGGGGCGGGGGGCGGGCGTGCCGTGGGGGTGGAGCGCcacgcag                                                                                 >  1:4687766/1‑149 (MQ=255)

                                                                   aaaCCACCACCTCCCCCGCTGCTACCCGCAAGAGCTGCGGCTTGAGGGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctcg                                                                                <  2:2524871/151‑1 (MQ=255)

                                                                   aaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCAC‑AACCCCCCCCCGGGGTGGGGGGCGGGCGGGGCCTGTGGGTCGAGCGccccccgcg                                                                                >  1:5191212/1‑144 (MQ=255)

                                                                   aaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctcg                                                                                <  1:738625/151‑1 (MQ=255)

                                                                    aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCgg                                                                               <  1:6051474/151‑1 (MQ=255)

                                                                      ccccaACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgc                                                                             <  2:9772785/148‑1 (MQ=255)

                                                                      ccACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgc                                                                             <  1:7335251/151‑1 (MQ=255)

                                                                      ccACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgc                                                                             <  1:10144994/151‑1 (MQ=255)

                                                                       cacaACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCGC‑TACCGCCCCCGGGGGGGGGGGCCGGGCGTGCCGTGTGGGGGGAGCGCCACGCTCggggg                                                                            >  1:8802463/1‑149 (MQ=255)

                                                                            ccTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGcc                                                                       <  1:6692099/151‑1 (MQ=255)

                                                                                ccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGa                                                                   <  2:1869477/151‑1 (MQ=255)

                                                                                 cccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGaa                                                                  <  1:10510329/151‑1 (MQ=255)

                                                                                  ccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAAc                                                                 <  1:1992433/151‑1 (MQ=255)

                                                                                   cGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGACTGTGGTGTTGGGCCGCCCCCCAACCCTA‑AACCCCCCGCGGGCGGAGGGGCCCGGGGTGGCGTGTGGGGCGCGCGCCCCGCGCGGGCGCCGCCGGGAACg                                                                >  1:6124778/1‑151 (MQ=255)

                                                                                   cGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCAC‑AACCGCACCCGGGAGAGGGGGGCGGGCGTGCCTTGTGGGTCGAGCGCCGCGCTCGGGCGCAGCCTGGAACg                                                                >  2:7870322/1‑151 (MQ=255)

                                                                                     ctgctAACCGCACGAGCTGCGGCGTGAGTGTCGCGGATCGGATTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGAt                                                              <  2:10983178/151‑1 (MQ=255)

                                                                                         tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAACCCACAACCCCCAC‑CGGGAGGGGGGGCCCGGCGTGCCCTTTTGGTGGATCGCCACGCGCGGGCGCAGCCAGGGACgcatgat                                                          >  1:7862239/1‑145 (MQ=255)

                                                                                         tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGAACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCt                                                          <  1:11052583/151‑1 (MQ=255)

                                                                                             cGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCTC‑AACCCCACGCCGGAGAGGGGGCCGGGCCTGCCATGTTGGTCGAGCGCCTCGCTCGGGCGCACCCAGGAACGAATTCAAccc                                                      >  2:7761331/1‑151 (MQ=255)

                                                                                                aaTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCCCCCCAACACAC‑ACACCCACCCGGGGGAGGGGGGCCGGCGTGGCGTGTTGGGCGAGCGCCTCGCTCCGGCGCACCCAGGGACCATGTATAaccacc                                                   >  1:10842956/1‑151 (MQ=255)

                                                                                                  tAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTcccc                                                 <  2:8851584/151‑1 (MQ=255)

                                                                                                   aGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCt                                                <  2:11215900/151‑1 (MQ=255)

                                                                                                   aGCTGCGGCTTGAGTGACGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTC‑TCCCGCACTCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCt                                                <  2:9523990/151‑1 (MQ=255)

                                                                                                    gCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTa                                               <  2:5843852/151‑1 (MQ=255)

                                                                                                    gCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTa                                               <  1:2854442/151‑1 (MQ=255)

                                                                                                     cTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCTC‑TCCCCCACCCCGGAGAGGGGGCCGGGCGTGCCCTTTGGGTGGCGCGCCACCCACGGGCGCCGCCTGGGACCATGTCTAACCACCCCCAg                                              >  1:1693918/1‑151 (MQ=255)

                                                                                                         ggCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCAC‑TCCCCCACGCGGGAGTGGGGGCCGGGCGTGCCTTGTTGGTCGAGCGCCACCCGAGGGCGCAGGCGGGAACGATGGGTAACCGCCCCCAGGccc                                          >  2:6755266/1‑151 (MQ=255)

                                                                                                           cTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTCGGCCCCg                                        <  2:9629887/151‑1 (MQ=255)

                                                                                                            ttGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCgg                                       <  1:314341/151‑1 (MQ=255)

                                                                                                             tGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCggg                                      <  2:6380849/151‑1 (MQ=255)

                                                                                                              gAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGt                                     <  1:8891714/151‑1 (MQ=255)

                                                                                                              gAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGt                                     <  1:2640327/151‑1 (MQ=255)

                                                                                                               aGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCAA‑AACCGCCCGCGGGGGAGGGGGCCGGGGGTGCCTTGTTGGGGGAGCGCCACGCACGGGCGCCGCCCGGAACGATGTCTACCCACCCCGAGGCCCCgggga                                    >  2:10469281/1‑149 (MQ=255)

                                                                                                               aGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTa                                    <  1:3807393/151‑1 (MQ=255)

                                                                                                                gtgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCCCACCCCAACCCAC‑ACCCCCCCCCGGGGGAGGGGGGCGGGCGGGGCGTGTGGGGCGAGCCCCACGCAACGGCGCACCCGGGGACCTAGTCTAACCACCCCCAAGCCCCCGGGAt                                   >  1:9285787/1‑151 (MQ=255)

                                                                                                                 tgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATc                                  <  2:10180344/151‑1 (MQ=255)

                                                                                                                  gtCGCGGATCGGTTTTTGGATTGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGTGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCt                                 <  1:1850828/151‑1 (MQ=255)

                                                                                                                    cgcgGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTgg                               <  2:2712689/151‑1 (MQ=255)

                                                                                                                    cgcgGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCCAACCAC‑TCCCGCACCCGGGATAGGGGGCCGGGCGTGCCGTGTGGGTAGAGCGCCGCGCTCGGGCGCAGCCAGGTACGATGTCTACCCACCCCAAGGGCCCCGGGATCTgg                               >  2:10636928/1‑151 (MQ=255)

                                                                                                                     gcgGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGa                              <  2:8954086/151‑1 (MQ=255)

                                                                                                                      cgGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCAC‑AACCGCACGCGGGAGAGGGGGGCGGGGGTGGCTTGTGGGTCGGGCGCCTCCCGCGGGCGCAGCCGTGGACGATGTCTACCCACCCCGAGGCCCCCGGGATATGGaa                             >  2:6078983/1‑151 (MQ=255)

                                                                                                                      cgGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGaa                             <  1:11255790/151‑1 (MQ=255)

                                                                                                                       ggATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAt                            <  1:225849/151‑1 (MQ=255)

                                                                                                                         aTCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTc                          <  1:567673/151‑1 (MQ=255)

                                                                                                                          tCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCg                         <  1:2364935/151‑1 (MQ=255)

                                                                                                                              tttttGGAATGTGGTGTTGGCCCTCACCCCCCCCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGccc                     <  1:4020504/151‑1 (MQ=255)

                                                                                                                                tttGGAATGTGGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGccccc                   <  2:4587742/151‑1 (MQ=255)

                                                                                                                                       tgtgGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagcccag            <  1:33565/151‑1 (MQ=255)

                                                                                                                                       tgtgGTGTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagcccag            <  1:11212117/151‑1 (MQ=255)

                                                                                                                                        gtggtgTTGGCCCTCACCCCACCCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTCGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAgg           <  2:7598052/151‑1 (MQ=255)

                                                                                                                                         tggtgTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGc          <  2:2740452/151‑1 (MQ=255)

                                                                                                                                          ggtgTTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCa         <  1:217017/151‑1 (MQ=255)

                                                                                                                                          cggggtGGCCCTCCCCCCCCCCCTC‑TCCCCCACCCCGGAGAGGGGGCCGGGCGAGCCTCGAGCGCCGACCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCGCCCCGCCCCGAGGCCCCGGGCATCAGCAATTCGGCCCCCCGCCCAGGCa         <  2:10630490/146‑1 (MQ=255)

                                                                                                                                             gtTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAccc      >  2:3472100/1‑151 (MQ=255)

                                                                                                                                             gtTGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAcc      >  2:9110291/1‑151 (MQ=255)

                                                                                                                                              ttGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCa     <  1:9882971/151‑1 (MQ=255)

                                                                                                                                              ttGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCa     <  1:1906004/151‑1 (MQ=255)

                                                                                                                                               tGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAccca    >  2:10240025/1‑149 (MQ=255)

                                                                                                                                               tGGCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCGGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTAGGCCCCCAGCCCAGGCAACCaa    >  2:4285668/1‑151 (MQ=255)

                                                                                                                                                 gCCCTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTGGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCAAGGCCCGGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa  >  2:850658/1‑151 (MQ=255)

GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTC‑TCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`