BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	2,362,363	G→C	pseudogene (106/252 nt)	oprI ←	outer membrane lipoprotei OprI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	2,362,363	0	G	C	100.0%	1407.2 / NA	366	pseudogene (106/252 nt)	oprI	outer membrane lipoprotei OprI
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (165/201); total (165/201)

Only 100 of 366 total aligned reads displayed.

TATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCAATCTC  >  NC_008463/2362215‑2362509

tATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCtt                                                                                                                                                  >  1:8912161/1‑151 (MQ=255)

tATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCtt                                                                                                                                                  >  2:6677100/1‑151 (MQ=255)

  ttACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGATCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCg                                                                                                                                                >  2:4674000/1‑151 (MQ=255)

  ttACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCg                                                                                                                                                <  2:3266834/151‑1 (MQ=255)

  ttACTTGCGGATGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCg                                                                                                                                                >  2:5401853/1‑151 (MQ=255)

   tACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCgg                                                                                                                                               >  1:8544019/1‑151 (MQ=255)

    aCTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGt                                                                                                                                              <  2:2084028/151‑1 (MQ=255)

    aCTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGt                                                                                                                                              >  2:8190825/1‑151 (MQ=255)

     cTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTa                                                                                                                                             >  2:3346263/1‑151 (MQ=255)

     cTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTa                                                                                                                                             >  2:5038066/1‑151 (MQ=255)

       tGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGc                                                                                                                                           >  1:10498412/1‑151 (MQ=255)

         cGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCgg                                                                                                                                         <  2:4109003/151‑1 (MQ=255)

          ggctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGt                                                                                                                                        <  1:10898426/151‑1 (MQ=255)

           gctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTc                                                                                                                                       >  2:6805180/1‑151 (MQ=255)

             tggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAg                                                                                                                                     >  2:2281980/1‑151 (MQ=255)

              ggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCATACCTGCGTCAGCCTTGCTATAGGCTTCGACAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGtacga                                                                                                                                    >  2:1669533/1‑147 (MQ=255)

                ctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCACCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCTTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGTTAGCGGTCAGACg                                                                                                                                  >  2:1784797/1‑151 (MQ=255)

                  ttttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAg                                                                                                                                >  2:7519026/1‑151 (MQ=255)

                  ttttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAg                                                                                                                                <  2:10347527/151‑1 (MQ=255)

                   tttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGc                                                                                                                               >  2:7853627/1‑151 (MQ=255)

                    ttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCt                                                                                                                              >  1:8223601/1‑151 (MQ=255)

                    tcccAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCt                                                                                                                              >  2:4359686/3‑151 (MQ=255)

                      ccAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTc                                                                                                                            <  1:8084008/151‑1 (MQ=255)

                          cATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGtt                                                                                                                        >  1:591962/1‑151 (MQ=255)

                          cATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGtt                                                                                                                        <  2:10019123/151‑1 (MQ=255)

                           aTGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGttt                                                                                                                       <  2:4271750/151‑1 (MQ=255)

                               gcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCttt                                                                                                                   <  1:3418850/151‑1 (MQ=255)

                               gcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCttt                                                                                                                   >  1:8501896/1‑151 (MQ=255)

                                cAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTg                                                                                                                  <  2:10854999/151‑1 (MQ=255)

                                cAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCGTCGTCAGCGCGTGCCTGCGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTg                                                                                                                  >  1:7796840/1‑151 (MQ=255)

                                 aGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg                                                                                                                 <  1:4318491/151‑1 (MQ=255)

                                 aGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg                                                                                                                 >  1:75673/1‑151 (MQ=255)

                                 aGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTgg                                                                                                                 >  1:571515/1‑151 (MQ=255)

                                    gCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGt                                                                                                              <  1:6803226/151‑1 (MQ=255)

                                     cACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTg                                                                                                             <  1:921581/151‑1 (MQ=255)

                                       cGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGgc                                                                                                           <  2:9432962/151‑1 (MQ=255)

                                        gCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGgct                                                                                                          <  1:3174166/151‑1 (MQ=255)

                                              tAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCa                                                                                                    >  1:1596016/1‑151 (MQ=255)

                                                 ccTCGTCAGCGGTCTGCTGAGCTTTCTGCGCAGCGCCCAGAGCTTCGACAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAAcc                                                                                                 <  2:1044387/151‑1 (MQ=255)

                                                  cTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCg                                                                                                <  1:252172/151‑1 (MQ=255)

                                                      tCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTgg                                                                                            <  2:3023179/151‑1 (MQ=255)

                                                        aGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGcc                                                                                          >  1:4143412/1‑151 (MQ=255)

                                                         gCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCa                                                                                         <  2:131366/151‑1 (MQ=255)

                                                            gTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGaa                                                                                      <  1:3848245/151‑1 (MQ=255)

                                                             tCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAc                                                                                     >  1:8999603/1‑151 (MQ=255)

                                                                gctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagc                                                                                  <  2:6523361/151‑1 (MQ=255)

                                                                 ctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagca                                                                                 <  1:2427267/151‑1 (MQ=255)

                                                                 ctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagca                                                                                 <  1:9945622/151‑1 (MQ=255)

                                                                  tgAGCTGTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTAGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagcac                                                                                <  1:6579854/151‑2 (MQ=255)

                                                                    aGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagcc                                                                              <  1:912852/151‑1 (MQ=255)

                                                                       tttCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccaga                                                                           <  1:6121745/151‑1 (MQ=255)

                                                                        ttCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagag                                                                          <  1:5960027/151‑1 (MQ=255)

                                                                        ttCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGGAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagag                                                                          <  1:402682/151‑1 (MQ=255)

                                                                         tCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagc                                                                         <  1:1984048/151‑1 (MQ=255)

                                                                         tCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagc                                                                         <  1:3214942/151‑1 (MQ=255)

                                                                          cTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagcc                                                                        <  2:10394063/151‑1 (MQ=255)

                                                                            gAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagccag                                                                      <  1:7244874/151‑1 (MQ=255)

                                                                             agcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAgccagagccaga                                                                     <  2:980348/151‑1 (MQ=255)

                                                                              gcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGccagagccagag                                                                    <  1:10709578/151‑1 (MQ=255)

                                                                              gcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGccagagccagag                                                                    <  1:5178704/151‑1 (MQ=255)

                                                                               cagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCcagagccagagc                                                                   >  1:7207297/1‑151 (MQ=255)

                                                                               cagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTACGGTTTCATTGGAGTGGCTGCTGCAACCGCTGGCCAGAACAGCAGCcagagccagagc                                                                   <  1:2610582/151‑1 (MQ=255)

                                                                                agcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagca                                                                  <  2:9133440/151‑1 (MQ=255)

                                                                                agcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCGTCGGTAGCGGTCAGACGAGCTTCGGTTTCTGTGGAGGGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagca                                                                  <  2:1128561/151‑1 (MQ=255)

                                                                                  cgcCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcaga                                                                <  1:9842358/151‑1 (MQ=255)

                                                                                   gcCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCccgagcagag                                                               >  1:5433727/1‑151 (MQ=255)

                                                                                   gcCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCcagagcagag                                                               <  2:4847468/151‑1 (MQ=255)

                                                                                       agagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGaagt                                                           >  2:6924470/1‑149 (MQ=255)

                                                                                       agagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAtt                                                           >  2:10105431/1‑151 (MQ=255)

                                                                                        gagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAttt                                                          <  1:1193886/151‑1 (MQ=255)

                                                                                           cTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAg                                                       <  2:2694180/151‑1 (MQ=255)

                                                                                                  aGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttg                                                >  1:2849940/1‑151 (MQ=255)

                                                                                                    ccTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttgtt                                              >  1:2110308/1‑151 (MQ=255)

                                                                                                     cTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTc                                             >  1:4839215/1‑151 (MQ=255)

                                                                                                      ttGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCa                                            <  2:536783/151‑1 (MQ=255)

                                                                                                      ttGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCa                                            <  2:8570559/151‑1 (MQ=255)

                                                                                                      ttGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCa                                            <  2:8063668/151‑1 (MQ=255)

                                                                                                       tGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCAt                                           >  1:4591218/1‑151 (MQ=255)

                                                                                                       tGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCAt                                           >  1:2985253/1‑151 (MQ=255)

                                                                                                         cGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGACCGTTGTTCATCg                                         <  1:644520/151‑1 (MQ=255)

                                                                                                          gATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgt                                        <  1:9535652/151‑1 (MQ=255)

                                                                                                            tAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgtgt                                      <  1:4520018/151‑1 (MQ=255)

                                                                                                            tAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgtgt                                      >  1:3944845/1‑151 (MQ=255)

                                                                                                                cTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCGGAGAATTTCAGAACGTTGTTCATCGTGTTcac                                  >  2:6367812/1‑149 (MQ=255)

                                                                                                                cTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTccc                                  >  2:3731922/1‑151 (MQ=255)

                                                                                                                cTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTccc                                  <  2:9635610/151‑1 (MQ=255)

                                                                                                                    gTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTa                              <  1:10166388/151‑1 (MQ=255)

                                                                                                                    gTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTa                              >  1:1106561/1‑151 (MQ=255)

                                                                                                                           cgAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGa                       <  1:6533227/151‑1 (MQ=255)

                                                                                                                            gAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGAc                      >  2:569706/1‑151 (MQ=255)

                                                                                                                              gCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACAt                    <  2:7296774/151‑1 (MQ=255)

                                                                                                                               ccTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACAtt                   >  2:7638248/1‑151 (MQ=255)

                                                                                                                                 tGAGCACTAGCAGCTGCGTCTTCGGCAGCGGTCAGCCCAGCTTCGGTTTCATTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCATAAGGTGGACATTTc                 <  2:9232006/151‑1 (MQ=255)

                                                                                                                                  gAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTcc                <  2:3993703/151‑1 (MQ=255)

                                                                                                                                   aGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCa               >  2:11156587/1‑151 (MQ=255)

                                                                                                                                     cACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATa             >  1:7909466/1‑151 (MQ=255)

                                                                                                                                           cagcTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCa       <  1:10392228/151‑1 (MQ=255)

                                                                                                                                            agcTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCaa      >  2:7040360/1‑151 (MQ=255)

                                                                                                                                               tGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCAAtct   >  2:9046910/1‑151 (MQ=255)

                                                                                                                                                gCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCAAtctc  >  1:7669751/1‑151 (MQ=255)

TATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTTCCATAACAGCAATCTC  >  NC_008463/2362215‑2362509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`