Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_008463 | 3,673,534 | 3 bp→CTC | intergenic (+83/+13) | fabI → / ← PA14_RS16690 | enoyl‑ACP reductase FabI/SurA N‑terminal domain‑containing protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 3,673,534 | 0 | T | C | 99.8% | 1668.8 / ‑6.2 | 437 | intergenic (+83/+15) | fabI/PA14_RS16690 | enoyl‑ACP reductase FabI/SurA N‑terminal domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (261/175); minor base G (1/0); total (262/175) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
* | NC_008463 | 3,673,535 | 0 | C | T | 95.8% | 1845.7 / 37.7 | 456 | intergenic (+84/+14) | fabI/PA14_RS16690 | enoyl‑ACP reductase FabI/SurA N‑terminal domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base C (18/1); new base T (261/175); total (280/176) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.32e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
* | NC_008463 | 3,673,536 | 0 | T | C | 95.8% | 1659.2 / 49.4 | 456 | intergenic (+85/+13) | fabI/PA14_RS16690 | enoyl‑ACP reductase FabI/SurA N‑terminal domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base T (18/1); new base C (262/175); total (280/176) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.33e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 456 total aligned reads displayed.
ATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGNGTAAACGGCCTTTTTCT‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCGGCTC > NC_008463/3673392‑3673680 ||| tctACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGTAATAACGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCgg < 1:7229420/151‑1 (MQ=255) tctACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCgg < 2:9365125/151‑1 (MQ=255) aCGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGtct < 2:438075/151‑1 (MQ=255) gTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCa > 2:2725703/1‑151 (MQ=255) tCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAg < 2:11162442/151‑1 (MQ=255) aTGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTAt > 2:7359942/1‑151 (MQ=255) ggcTTCAACACGACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTtctc < 2:8895282/151‑1 (MQ=255) gcTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCg < 1:3579367/151‑1 (MQ=255) gatacAACACTACCGCCTTGGGCCCGCTGGACGACTACTTATCACCCCGAGCATGAAAATGGGCCGCTTCGAGGGGCCTTTTTCATGGGGGGAATAAACAAAAGGCCGCGTACGGGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCg < 1:1165263/147‑1 (MQ=255) cTTCAACACTCCCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCGTCGAGCGGCCTTTTTCATGGGCGGAATAACGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGa < 2:3791327/151‑1 (MQ=255) tacAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGTAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGAc < 1:4150044/149‑1 (MQ=255) cAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTCTTTCTCGACtt > 1:9677495/1‑151 (MQ=255) aaCACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAACAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTc < 1:10849581/151‑1 (MQ=255) acacTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATTAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTcc < 1:2639881/151‑1 (MQ=255) tACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCt > 1:1485263/1‑151 (MQ=255) aCCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCtt < 1:10608799/151‑1 (MQ=255) cGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGt > 1:3344883/1‑151 (MQ=255) cATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATTAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGTAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCt < 1:878792/151‑1 (MQ=255) cATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCt > 2:2561269/1‑151 (MQ=255) cATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCt > 2:6573127/1‑151 (MQ=255) aTGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTg < 2:8635482/151‑1 (MQ=255) tGGGCCCGCTGGACGACGACGGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGACAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGc < 1:6540376/151‑1 (MQ=255) gCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGAc < 1:3515758/151‑1 (MQ=255) cTGGACGCCGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATACAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGAcg < 1:7719118/151‑1 (MQ=255) ggACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGAcggc > 1:1699239/1‑151 (MQ=255) gacgacgacTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAACGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGAcggcg < 1:5063302/151‑1 (MQ=255) acgacTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAg > 2:11002063/1‑151 (MQ=255) acgacTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAg < 2:10781946/151‑1 (MQ=255) acgacTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGAGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCTGTATTTGTCGAACTCCGCCTTGTCCTGCACCTGACGGCGGAAg > 1:7482863/1‑151 (MQ=255) ctacTGATCACCCCGCTCATTAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAgg < 2:9649262/149‑1 (MQ=255) tGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAggcggc < 2:3248223/151‑1 (MQ=255) tGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAggcggc > 1:2322758/1‑151 (MQ=255) tGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAggcggc > 1:7936312/1‑151 (MQ=255) tGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAggcggc > 1:4253842/1‑151 (MQ=255) cACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAg > 1:9998167/1‑151 (MQ=255) ccccGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGGCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGCAGTc > 2:10516309/1‑151 (MQ=255) cccGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGTAGGCGGCGAAGTCt > 1:9790521/1‑151 (MQ=255) cccGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCt < 1:10010364/151‑1 (MQ=255) cTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGTAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCt < 1:3941034/151‑1 (MQ=255) tCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTg > 2:9265912/1‑151 (MQ=255) tCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTg > 2:3612974/1‑151 (MQ=255) cATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGt > 1:10697334/1‑151 (MQ=255) tGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTcc > 1:6359311/1‑151 (MQ=255) gAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCg < 2:10338252/151‑1 (MQ=255) aTGGCCGCTTCGAGCGGCCTTTGTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCTGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgcg > 2:4022646/1‑151 (MQ=255) tGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGACACGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTACCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgcgc < 1:5281360/151‑1 (MQ=255) tGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgcgc > 1:5977017/1‑151 (MQ=255) tGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgcgc > 1:5568088/1‑151 (MQ=255) cGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAg > 1:7304112/1‑151 (MQ=255) cGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAg > 2:2164397/1‑151 (MQ=255) cGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAg > 2:1323094/1‑151 (MQ=255) cGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑GGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAg > 1:3150291/1‑151 (MQ=255) tCGAGCGGCCTTTTTCATGGGCGGAATAAAGAACAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAg < 2:4634069/151‑1 (MQ=255) tCGAGCGGCCTATTTCATGGGCGGAATAAAGACAAGGCCGCGTACGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAg < 1:10899541/151‑1 (MQ=255) gCGGCCTTTTTCATGGGCGGAATACAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAg < 1:6865074/151‑1 (MQ=255) cTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAgcggcg > 1:3412669/1‑151 (MQ=255) cTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCAAGGAAgcggcg > 1:8196166/1‑151 (MQ=255) tttCATGGGCGGACTAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTa < 2:6788246/151‑1 (MQ=255) tttCATGGGCGGAATACAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTa < 1:11167929/151‑1 (MQ=255) tttCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGACGCCAGGAAGCGGCGGTa > 2:2276896/1‑151 (MQ=255) attCATGGGCGCAATAACGAAAAGGCCGCGTAAGCGGCATATTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGACCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTa < 2:5547984/150‑1 (MQ=255) ttCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTAc > 1:2718400/1‑151 (MQ=255) ttCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTAc > 1:10104417/1‑151 (MQ=255) cATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACAt > 1:440442/1‑151 (MQ=255) tGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATgg > 2:7753792/1‑151 (MQ=255) tGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATgg > 1:3718136/1‑151 (MQ=255) gggCGGAATAAACAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGc < 1:1978152/151‑1 (MQ=255) ggCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGcc > 1:7000491/1‑151 (MQ=255) gCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCt < 1:4030105/151‑1 (MQ=255) ggAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTtc > 1:669823/1‑151 (MQ=255) cgaagaaAGAAAAGCCCGCGTAAGCCGCCTTTTCTC‑AGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACGGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTtc < 2:6047283/150‑1 (MQ=255) gAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTtct < 2:2987626/151‑1 (MQ=255) gAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTtct < 2:639388/151‑1 (MQ=255) aaTAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTtctc > 2:7915500/1‑151 (MQ=255) aaTAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTtctc > 1:9072025/1‑151 (MQ=255) aTAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcg < 2:7595490/151‑1 (MQ=255) tAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgt < 1:11027210/151‑1 (MQ=255) tAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgt < 2:8296218/151‑1 (MQ=255) aaGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtcg > 2:6853931/1‑151 (MQ=255) aGAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtcgt < 2:3452335/151‑1 (MQ=255) gAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtcgtc > 2:5324969/1‑151 (MQ=255) gAAAAGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCACAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtcgtc < 2:5765763/151‑1 (MQ=255) aaaaGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtcgtcg < 2:8077733/151‑1 (MQ=255) aaaGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCgg > 1:8357957/1‑151 (MQ=255) aaGGCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCGCAGTAATTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGACGTCTGCCTGTCAGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGga > 2:847720/1‑151 (MQ=255) gCCGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGAt > 2:1584978/1‑151 (MQ=255) gCCGCGTAAGCGGCCATTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCATGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGAt > 2:5638113/1‑151 (MQ=255) ccGCGTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGCAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATa > 2:7179725/1‑151 (MQ=255) cgcgTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAg > 1:1408456/1‑151 (MQ=255) cgTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGcc < 2:10284731/150‑1 (MQ=255) gTAAGCGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGcct > 2:4544140/1‑151 (MQ=255) gcGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCctcctc > 2:6985685/2‑151 (MQ=255) cGGCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCtcctcc > 1:312484/1‑151 (MQ=255) ggCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCg > 1:5320155/1‑151 (MQ=255) gCCTTTTCTC‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCgg > 2:1958132/1‑151 (MQ=255) ccttttCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCGGc > 1:6174933/3‑151 (MQ=255) cttttCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACTGCGGAAGTCGGAGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGTCGGTACATGGACTTCTCGTCGTCGGAGCTAGCCTCCTCCGGCt > 2:9049222/2‑151 (MQ=255) cttttCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCGGCt > 2:5146592/2‑151 (MQ=255) cttttCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCGGCt > 1:472792/2‑151 (MQ=255) ttttCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCGGCTc > 1:2563744/1‑151 (MQ=255) ||| ATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGNGTAAACGGCCTTTTTCT‑TGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAGCCTCCTCCGGCTC > NC_008463/3673392‑3673680 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |