| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002745 | 607567 = | 106 (0.450) | 5 (0.020) | 3/448 | 12.4 | 3.8% | coding (2353/2862 nt) | sdrC | MSCRAMM family adhesin SdrC |
| ? | NC_002745 | = 607836 | 152 (0.670) | coding (2622/2862 nt) | sdrC | MSCRAMM family adhesin SdrC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTGTCTGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002745/607804‑607567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgagtcTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGT < NC_002745/607836‑607604 tagCTGACTCTCTTTATGCATCTTAATCGCTATCTTCATCTGAATTGTTGTCTGCATCTGAGTCGCTTTCTGAATCTGAGTCTCTATCTGAGTCTGAATCTCTGTCAGAATCTGATTCGTTGTCTGTGTCTGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTGTCTG < 1:1235988/231‑1gcTCTGAGTCGCTTGCTGTGTCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCTCTTTCTGAATCTGAGTCGCTTTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTG < 1:1358373/232‑1acTCTGGGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTGTCTG < 1:1406884/232‑1 tctatgtatCTGTCTAAATCTTAATCGCTATCTAAATCTCAATCGCTATCAGAATCTGATTCGCTGTCTGGATCTGAATCGCTATCTGTGTCTGAATCGCTATCAGAATCTGAGTCGTTGTCTGAATCCGATTCACTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCTGAG < 1:571380/225‑1 TCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTTTCTGAATCTGAGTCGCTGGCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTGTCTGAG < 1:465967/234‑1 TCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTGTCTGAG < 1:1039194/234‑1 GTCGCTATCTGAGTCTGAGTCACTTTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGA < 2:29129/72‑1 CGCTATCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAA < 2:90593/53‑1 GTCACTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAA < 2:90495/37‑1 ATCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGA < 1:632721/42‑1 aggacagGTCTTAGTCTGAATCGCTGTCTGATTCTTAGTCGCTATCTGATTCTGAGTCGCTATCTGAATCTGAATCGCTTTCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAATCTG < 1:640128/227‑1 GTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCAGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGA > 1:386164/1‑234 CTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAATCTGAATCGCTGTCCGAATCTGCGTCGCTCTCTGAGT > 1:841160/1‑234 CTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGGTGTCTGAGTCGGAATCGCTATCTGAGTCTGAGTCTGTATCGGAATCTGAATCGGTGTCTGAATCTGAGTCGCTGTCTGAGT > 1:1408082/1‑234 CTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTCTCCGAATCTGCATCGCTGTCTGATTCTGTGTCGCTGGCTGAGT > 1:435219/1‑234 AATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTGTCTGAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002745/607804‑607567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgagtcTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGTTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGT < NC_002745/607836‑607604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |