New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002745	612208 =	116 (0.490)	3 (0.010)	3/460	12.5	1.9%	coding (3766/4158 nt)	sdrD	MSCRAMM family adhesin SdrD
	?	NC_002745	= 616224	189 (0.810)					coding (3231/3426 nt)	sdrE	MSCRAMM family adhesin SdrE
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTAACAGGTGTGTGCTTACCTGCATCTGAGTCTGAATCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCCGAATCTGAGTCACTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCCGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002745/612441‑612208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaATCGCTATCTGAGTCTGAATCACTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCACTGTCCGAATCTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAGTCACTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCT  <  NC_002745/616224‑616003                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTAACAGGTGTGTGCTTACCTGCATCTGAGTCTGAATCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCCGAATCTGAGTCACTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCCGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGc                                                                                                                                                                                                                                >  1:214794/1‑233                           CTGAGTCTGAATCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTATCTGAATCTGAATCTCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGACTCTCTATCTGAGTCTGAATATCAATCTGAGTCTGAATCgcatt                                                                                                                                                                                                      >  1:1423003/1‑229                             GAGTCTGAATCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCACTATCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCTCTATCTGAATCTGAATCACTATCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTCAGTCTGAATCGCTATCTGAGTCTGAATCTCCATCTCAGTCTGAACCTCTGTac                                                                                                                                                                                                    >  1:1402373/1‑232                                                                                                                                                                                                                               atcctgGTCTGATTCTCTATCATAGTCTGAATCACTGTCTTAATCTGAGTCGCTATCTGAGTCTGAGTCGTTATTTGAATCTGCGTCGCTATCTGAGTCTGAATCACTATCCGAATCTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAGTCACTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCT  <  1:1251073/228‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTAACAGGTGTGTGCTTACCTGCATCTGAGTCTGAATCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCCGAATCTGAGTCACTATCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCCGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002745/612441‑612208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaATCGCTATCTGAGTCTGAATCACTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCACTGTCCGAATCTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAGTCACTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCT  <  NC_002745/616224‑616003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.