New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002745 | 777410 = | 306 (1.130) | 7 (0.030) | 7/464 | 10.0 | 2.0% | intergenic (+399/+480) | SA_RS03870/SA_RS03880 | 5'‑3'‑deoxyribonucleotidase/diacylglycerol kinase family lipid kinase |
? | NC_002745 | 2808693 = | 376 (1.390) | intergenic (‑234/+217) | SA_RS14280/noc | DUF3147 family protein/nucleoid occlusion protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TTATAATAATGAGATAGACTAACATTTATTGAGAGCGGGACGGAAATGATAAAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTGTGTTGGGGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002745/777639‑777410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCA > NC_002745/2808693‑2808750 TTATAATAATGAGATAGACTAACATTTATTGAGAGCGGGACGGAAATGATAAAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCTCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAG‑AATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACT > 1:253103/1‑234 ATAATAATGAGATAGACTAACATTTATTGAGAGCGGGACGGAAATGATAAAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTGTGTTGGGGCCCCTGACTA > 1:753154/1‑234 ATGAGATAGACTAACATTTATTGAGAGCGGGACGGAAATGATAAAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAG‑AATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGA < 1:38380/234‑1 AGATAGACTAACATTTATTGAGAGCGGGACGGAAATGATAAAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCTCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAG‑AATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAA > 2:373133/1‑234 ACGGAAATGATAAAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTC < 2:753154/234‑1 AAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCTCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAG‑AATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGC > 2:673953/1‑234 AACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCA < 1:1328476/234‑1 TTATAATAATGAGATAGACTAACATTTATTGAGAGCGGGACGGAAATGATAAAGAACGACTAATGATTGATTATGTAGCGATTCTTTATCATTAGTCAAAGCTAATGTGTACTTAAAAATAGGAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTGTGTTGGGGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002745/777639‑777410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCA > NC_002745/2808693‑2808750 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |