| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,345,484 | A→C | 8.5% | intergenic (‑188/+180) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,345,484 | 0 | A | C | 8.5% | 834.2 / 20.3 | 264 | intergenic (‑188/+180) | fabI/ycjD | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein |
| Reads supporting (aligned to +/- strand): ref base A (56/178); new base C (24/5); total (80/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.14e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 270 total aligned reads displayed.
AGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAG > CP009273/1345339‑1345633 | aGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑GTTTCACCACACCCTAAACCACTACCCACAgg > 2:3296312/1‑150 (MQ=255)aGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCGGTGAGGAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑GTTTCCCCGCACCCAAACCCACACCCCACAgg > 2:676772/1‑150 (MQ=255) gCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAgggg < 2:4159056/150‑1 (MQ=255) cGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGc < 2:4859519/150‑1 (MQ=255) aTTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGa < 2:2917117/150‑1 (MQ=255) aTTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGa < 1:4742498/150‑1 (MQ=255) tcgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGa < 1:4078888/150‑1 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTGCCCACACCCCAAACCACACCCCACAGGGGCGTgggggc > 2:2773384/1‑148 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑cc < 2:534848/150‑1 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCACAACCAAACCCACACCCCACAGGGGCGAGGGGc‑cc > 2:5156360/1‑150 (MQ=255) tttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCGTTTGGCCCCCACCCCAACCCCACCCCCCACGGGGCGGGGGGC‑CCg > 2:902615/1‑150 (MQ=255) tttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑GGTTGCCCACACCCCCACCCACTCCCCCCAGGGGGGCGGGGG‑cccg > 2:4883713/1‑148 (MQ=255) aGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGGTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTAtt < 1:2190344/150‑1 (MQ=255) gTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATtg < 2:2579303/150‑1 (MQ=255) tAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATCGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATtgt < 1:294847/150‑1 (MQ=255) tAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTGCCCCCACCCAAAACCACCCCCCCCACGGGCGCGGGGG‑cccgatttg > 1:4350707/1‑143 (MQ=255) aaCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGGTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGc < 1:948872/150‑1 (MQ=255) aCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGTGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGcc > 2:4956984/1‑149 (MQ=255) cGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATAtt < 2:1146439/150‑1 (MQ=255) cGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATAtt < 1:2843670/150‑1 (MQ=255) aaCAGATACACGGTTATTATAATCAACCTGGCGGTGAGGAGCTATAGTTGCCAGGTCCGACCGGCGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGt < 2:5079250/150‑1 (MQ=255) aaCAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑GTTTGCCCTCACCCCAAACCACAACCCCCCGAGGGGAGGGGT‑CCGGATTGGGGAAATAtttt > 2:1403483/1‑148 (MQ=255) aaCAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑GTTTCCCCCCACCCAAAACCACACCCCAGCGGGGCGACGGGT‑CCCAATTGTGCAAAAAtttt > 1:4811619/1‑148 (MQ=255) aCAGAGAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGtt < 2:2686488/150‑1 (MQ=255) aGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTAc < 2:132658/150‑1 (MQ=255) tAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTAcccc < 2:5217322/150‑1 (MQ=255) aaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAg < 1:1717822/150‑1 (MQ=255) tattatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTACCCACACCCAAAACCAAACCCCACAGGGGCGAGGGGA‑CCCGATTTTGCAAATAATTTTAACCCACcaacaa > 2:3051077/1‑150 (MQ=255) tattatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTGGCCCACACCCTAACCCTCACCCCAGAGGGGCGCGGGGA‑CCGGATTGTGCAACTATTGTTAACCCCCcaacaa > 2:2996814/1‑150 (MQ=255) attatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCaacaaa < 1:1043436/150‑1 (MQ=255) aaTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCACCCCCCAACCCACACCCCACAGGGGGGCGGGGG‑CCCGAGTGTGGAAAAAATGTTACCCCCCCaacaaaaacgc > 2:4236806/1‑145 (MQ=255) aTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTAACCCAAAACCACACCCCAGAGGGGCGAGGGGA‑CCCTATTGTGCAAATATTTTTAACCCACCAACAAACACGCt > 2:717973/1‑150 (MQ=255) cAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑GTTTACCCCAACCCAAACCCACACCCCACAAGGGCGAGGGGC‑CCGTAATTTTCAAAAAATTTTTAACCAACAACAAACAGGcaca > 2:2375303/1‑150 (MQ=255) aCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTGTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATa < 2:311351/150‑1 (MQ=255) tGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTACCCAAACCCAAAACCACACCCCAGAGGGGCGGGGGGG‑ACGTATTGTTCAAAAATTTTTAACCCACCAACAAAAAGGcacaaaaag > 2:356905/1‑145 (MQ=255) ggCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGc < 1:4921386/150‑1 (MQ=255) cTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTGCCCACCACCAAACCCAAAACCCACGGGGGCGCGGGGACCCGAGTTTTGCAAAAATTTTTA‑CCCACCCACAAACACGCTCATACAGccc > 2:1607372/1‑150 (MQ=255) cTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTGCCCACACCCAAAACCACAACCCACCGGGGGGAGGGGG‑CCCGATTGTGCAAAAAATGTTAAACCACCCACAAAAAAGCGCAAACAGccc > 2:1855353/1‑150 (MQ=255) tgtgAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑GTTTGCCCGCACCCAAACCCACTACCCACATGGGCGCGGGGG‑CCCGAATTTGGAAAAATTGTTTAACCAGCAAAAAAAACGCGGAGACAGcccc > 2:4473143/1‑150 (MQ=255) tgAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTa < 1:4402087/150‑1 (MQ=255) tgAGTAGCTATAGGTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCCGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTa < 2:4709468/150‑1 (MQ=255) aGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAAc < 1:1976058/150‑1 (MQ=255) tAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAAccc < 1:5060829/150‑1 (MQ=255) gCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCtt < 2:638584/150‑1 (MQ=255) gCTATAGGTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCtt < 2:3702218/150‑1 (MQ=255) tataGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCACACCCTCACCCACACCCCCGCCGGGCGAGGGGC‑CCCGAGTGTGCCAAAAATTTTACCCCCCCAACAAACACGCTCAAACAGCCCCAAAcccaatc > 2:4791212/1‑146 (MQ=255) ataGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCa < 1:4884501/150‑1 (MQ=255) ataGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCa < 1:4001360/150‑1 (MQ=255) gTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATgg < 1:923801/150‑1 (MQ=255) ccAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCTAATATTGTTACCCCAGCTACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGAt < 1:1381887/150‑1 (MQ=255) ccAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCAAACCCACTACCCCGAGGGGCGAGGGGA‑CCCTATTGTGCAAAAAATGTTACCCCACCAACAAACAGGCGCAAACAGCCCCAAACCCATTACTGGCgct > 2:1259197/1‑148 (MQ=255) ccAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCACCCCCGAAACCACACCCCCCAGGGGCGCGGGGG‑CCCCATTGTGCAAAAAATGTTTACCCACCACCAAACAGGCTCAAACAGCCCCAAACCCGTTAAAGGCggt > 2:3888081/1‑148 (MQ=255) cAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCGCACCCGAACCCACTCCCCAGAGGGGCGAGGGGA‑CCGTATTGGGCAAAAATTGTTACCCCCGCAACAAAAAGGCTCAAACAGCCCCAAACCCATTCATGGCGATg > 2:3453206/1‑150 (MQ=38) cAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCACACCCAAAACCACTCCCCCGAGGGGCGGGGGGG‑CCCGAATGTGCAAAAATTTTTACCCCAGCAACAAAAAGGCTCAAAAAGCCCCAAACCCAGTCAAGGCGATg > 2:837924/1‑150 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATgg < 1:1186283/150‑1 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATgg < 2:3557060/150‑1 (MQ=255) ggTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGc < 2:4755590/150‑1 (MQ=255) cGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTggg < 1:2745184/150‑1 (MQ=255) aCCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGAc < 1:649765/150‑1 (MQ=255) aCCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGAc < 2:761120/150‑1 (MQ=255) ccGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACg < 1:5243789/150‑1 (MQ=255) ccGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACg < 1:3036700/150‑1 (MQ=255) gAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGtt < 1:2091212/150‑1 (MQ=255) gCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCa < 1:1913398/150‑1 (MQ=255) gCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGAcc < 2:4197718/150‑1 (MQ=255) gCAGGGGGGGCGC‑TTGTCCCCTCACCCGAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCg < 2:3633958/150‑1 (MQ=255) aGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGaa < 2:457113/150‑1 (MQ=255) aGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGaa < 2:1588076/150‑1 (MQ=255) gggggCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAatat < 2:1719518/150‑1 (MQ=255) gggggCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAatat < 1:4184253/150‑1 (MQ=255) ggggCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATAtt < 1:4823669/150‑1 (MQ=255) ggggCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATAtt < 1:2314940/150‑1 (MQ=255) ggCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATtct < 2:2079004/150‑1 (MQ=255) cgc‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTcc < 2:213217/150‑1 (MQ=255) gc‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCa > 2:3380778/1‑150 (MQ=255) c‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCATTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAg > 1:1833140/1‑150 (MQ=255) ttttCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGc < 2:3787073/150‑1 (MQ=255) ttttCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGc < 2:2204298/150‑1 (MQ=255) ttttCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGc < 2:2294008/150‑1 (MQ=255) ttCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCAc < 2:2869021/150‑1 (MQ=255) tCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCAcc < 1:1464443/150‑1 (MQ=255) cTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGtct < 2:31527/150‑1 (MQ=255) cACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTcc < 1:3296312/150‑1 (MQ=255) aCCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGtttt > 2:2882604/1‑150 (MQ=255) aCCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGtttt < 1:2607905/150‑1 (MQ=255) aCCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGtttt < 1:4524649/150‑1 (MQ=255) cccTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTc > 2:4359822/1‑150 (MQ=255) cccTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTc < 1:3553253/150‑1 (MQ=255) ccTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTca < 2:4066703/150‑1 (MQ=255) ctctCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcac > 2:1071244/1‑150 (MQ=255) tctcCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCC‑TTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcacca < 1:2516848/150‑1 (MQ=255) ctcCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcacca < 1:821653/150‑1 (MQ=255) ctcCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcacca < 2:2436996/150‑1 (MQ=255) ccccAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACcaca > 1:3743273/1‑150 (MQ=255) ccccAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACcaca < 2:4663137/150‑1 (MQ=255) ccccAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACcaca < 2:3042120/150‑1 (MQ=255) cccAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaa > 1:3716238/1‑150 (MQ=255) cAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaaca < 1:1125282/150‑1 (MQ=255) agagGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAg < 1:665319/150‑1 (MQ=255) agagGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAg < 1:1669707/150‑1 (MQ=255) | AGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGC‑TTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAG > CP009273/1345339‑1345633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |