| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,673,381 | C→A | 6.4% | S233* (TCA→TAA) | ydgH → | DUF1471 family periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,673,381 | 0 | C | A | 6.4% | 866.3 / 3.4 | 278 | S233* (TCA→TAA) | ydgH | DUF1471 family periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base C (116/131); new base A (13/18); total (129/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
GAGCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGC > CP009273/1673232‑1673528 | gagCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGtcatc > 1:3863420/1‑150 (MQ=255) gCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCaa < 1:104358/150‑1 (MQ=255) gCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCaa < 2:1458935/150‑1 (MQ=255) cccGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCaaa < 2:2651516/150‑1 (MQ=255) tgATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAggcgggc > 1:5238060/1‑150 (MQ=255) tgATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAggcgggc > 1:1694473/1‑150 (MQ=255) tCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGtt > 2:3930085/1‑150 (MQ=255) cccGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTa < 2:524621/150‑1 (MQ=255) cccGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTa < 2:1036851/150‑1 (MQ=255) ccGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTac < 2:737932/150‑1 (MQ=255) ccGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTac < 1:3513873/150‑1 (MQ=255) cGGCTGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTaca < 2:1545377/150‑1 (MQ=255) ggCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTacac > 2:1916053/1‑150 (MQ=255) ggCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTacac < 2:4546147/150‑1 (MQ=255) gCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACAcc < 2:652632/150‑1 (MQ=255) cAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTATTTTGAAACCC‑GTCAAAAAAATGCGGGCGTTacaacc > 1:5037168/1‑147 (MQ=255) cAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑ATTTGTAACCCAGTCATAAAAATGCGGGCGTTACACCg > 1:2410653/1‑150 (MQ=255) aGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGt > 2:5075119/1‑150 (MQ=255) aGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCACTCATCAAAAGGCGGGCGTTACAccct > 1:2630050/1‑148 (MQ=255) gATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTc < 1:1582791/150‑1 (MQ=255) gATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCGT‑GTTTTAAACCCACTCAACAAAAGGCGGGCGGTACACCGTc > 1:1793808/1‑150 (MQ=255) ttCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCAc < 1:377542/150‑1 (MQ=255) aaGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGGTACACCCTCACGCGcc > 1:1934115/1‑150 (MQ=255) aGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTccc < 1:2556380/150‑1 (MQ=255) aGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTccc < 1:5181502/150‑1 (MQ=255) cAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCgg < 2:4339461/150‑1 (MQ=255) gACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCGT‑CTTTGAAACCCCGTCATCCAAAGGCGGGCGTTACACCGTCACCCTCCCGGCTg > 1:1896644/1‑150 (MQ=255) aCGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATgg < 1:4501221/150‑1 (MQ=255) gTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCa > 2:361315/1‑150 (MQ=255) gTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCa < 2:1878340/150‑1 (MQ=255) gCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACt < 2:5044858/150‑1 (MQ=255) cAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTa < 1:988626/150‑1 (MQ=255) aGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCGT‑CTTTTAAACCCACTCATAAAAAGGCGGGCGTTACACCCTCACGCTCCCGGATGGCACGaa > 1:1480147/1‑150 (MQ=255) aGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCGT‑CTTTGAAAACCACTCATCAAAAGGCGGGCGTTAAACCCTCACCCACCCGGATGGCACTaa > 1:2275144/1‑150 (MQ=255) ctGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTc < 1:1837777/150‑1 (MQ=255) ctGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTc < 2:3235225/150‑1 (MQ=255) ctGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCACCCGGATGGCACTAAAGTc > 1:2966583/1‑150 (MQ=255) tGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCg < 1:3944924/150‑1 (MQ=255) cTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCgaag < 1:5010781/150‑1 (MQ=255) cTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCgaag < 1:4970492/150‑1 (MQ=255) cTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCgaag < 1:3692416/150‑1 (MQ=255) cGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACt < 2:4268650/150‑1 (MQ=255) cGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACt < 2:704266/150‑1 (MQ=255) gAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACaaa < 2:2385785/150‑1 (MQ=255) aGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGc < 2:1667871/150‑1 (MQ=255) cgcgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGAc < 2:2094349/150‑1 (MQ=255) gctaagaaTGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAAAAAAGCGAcc < 2:2009440/147‑1 (MQ=255) cgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAAACCACTCATAAAAAGGCGGGCGTTAAACCGTCACCCTCCCGGATGGCACAAAAGTAGAATAACTGAAAAAATCGACCg > 1:4882063/1‑150 (MQ=255) cgAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCGT‑ATTTGAAAACCACACAAAAAAAAGCGGGCGTTACACCCACACCCCCCCCGAAGGCACAAAAATCGAAGAACAGAACAAAaccaccc > 1:2649912/1‑149 (MQ=255) gaagaaAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTTAAAACCAGTCATCAAAAGGCGGGCGTTACACCGTCACCCTCCCCGCTGGCACAAAAGTAGAATAAAAGAACAAAACCACCGc > 1:558097/1‑150 (MQ=255) aagaaAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTTAAACCCAGTCATCAAAATGCGGGCGTTACACCGTCACGCTCCCGGATTGCACAAAATTAGAAGAACAGAACAAATCGACCGCa > 1:217012/1‑150 (MQ=255) aagaaAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACCCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCa > 1:798530/1‑150 (MQ=255) gaaAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAATTCGAATAACTGAACAAAGCGACCGCAGc > 2:497690/1‑150 (MQ=255) aaGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCga > 2:2242875/1‑150 (MQ=255) tGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTAATAAAAAGGCGGGCGTTACACCGTCACCCTCCAGGATGGCACAAAAGTCGAAGAACTGAACAAACCGAACGCAGCgattat > 2:3324266/1‑150 (MQ=255) gtgaTCCGGGGTGTTGCTACTACCGCACCACCATGTACTGATGTCGGTCGATT‑CTTTGAAACCCAGTCATCAATCGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTTAACAACGCGACCGCAGCGatgatg < 2:3246648/148‑1 (MQ=255) gaTCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGt > 2:3476647/1‑150 (MQ=255) agcccGGGTGTTGCGACTCCCGCAACACCATGTTCTTAAGTCGGTCGATT‑CTTTGAAACCCAGTCATCAAAAGGCGGGGTTTACACCGTCACGCTCCCGGTTGGCACTAACGTCGAATAACTGAACAAAGCGACCGCAGCGATGATGGTc < 2:5037184/148‑1 (MQ=255) aTCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTc > 2:2609359/1‑150 (MQ=255) cccGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTTAACAAAGCGACCGCAGCGATGATGGTccc > 2:5162527/1‑150 (MQ=255) cggggTGTTGCGACTCCCGAATCACCATGTACTGATGTCGGTCGCTT‑CTTTTAAACCCAGTCAACAAATGGCGGGCGTAACACCGCCACGCTCCCGTATGGCACAAAAGTCGAACAACTGAACAACGCGACCGCAGCGATGATGGTCCCg < 2:4886229/148‑1 (MQ=255) gggTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGGTACACCGTCACGCTCCCGGCTGGCACGAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGtt > 2:4089004/1‑150 (MQ=255) ggTGTTGCTACTACCGCATCACAATGTTCTTAAGTCGGTCGCTT‑ATTTCAAACCCATACATCAAAAGGCGGGCGTTACACCTTCACGCTCCGGTATGGCACTAAAGTCTAATAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTc < 2:4952616/150‑1 (MQ=255) ggTGTTGCGACTCCCGCATCACCATTTTCTTACGTCGGTCGCTT‑CTTTGAACCCCCGTCAGAAAACGGGGGGGTTTACCCCGTCCCGCTCCCGGTTGGCACTAAAGTCGAAGAACTTAACAACGCGACCGCAGCGATGATGGTCCCGTTc < 1:3376041/150‑1 (MQ=255) ggTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTc > 1:2097852/1‑150 (MQ=255) ggTGTTGCGACTACCCCAACACAATGTTCTTATGTCGGTCGCTT‑CTTTGAACCCCAGTCAAAAAATGGGGGGGGTTACACCGTCACGCTCCGGGTTGGCACTAACGTCGAAGAACTGAACAACGCGACCGCAGCGATGATGGTCCCGTTc < 2:27257/150‑1 (MQ=255) ggTGTTGCGACGACCGCATCACCATGTTCTTATGTGGGTGGATT‑TTTTGAAACCCATACATAAAACGGGGGGCGTTACACCGACACGCGCCCGGATGCCAATAACGTCTAATAACTGACCAAAGCGACCGCAGCGATGATGGTCCCGTTc < 1:3844558/150‑1 (MQ=255) tgtTGCGACTACCGCATCACCAAGTTCTGACGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGa < 2:2887456/150‑1 (MQ=255) ttGCTAATACCGAAACAAAAAGTTCTGAAGTGGGTCGCTT‑ATTTCAAACCAAGTAATAAAACGGCGGGCGTAACACCGTCACGCTCCCGGATGCAACTAAAGTCTAAGAACTTAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACa < 1:4707994/150‑1 (MQ=255) cTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCCGTCATAAAACGGCGGGCGGTACACCGTCACGCTCCCGGATGGCACTACAGTCGAAGACCTGAACACCGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCa < 2:1198916/150‑1 (MQ=255) cTACCGCATCACAAATTTCTTATGTCGGTCGATT‑CTTTGAAACCCATTAATAAAATGGCGGGCGTTACACCGTCACGCTCCGGGATGCCACTAAAGTCTAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCa < 1:2927111/150‑1 (MQ=255) tACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCACTCATCAAAAGGCGGGCGGTAAACCCGCACGCACCCGGATGGCACTAAATTCGAAGAAAAGAACAAAGCGACCGCCCCGCTTATGGTCCCCGTCGACAGCATCaa > 1:5109046/1‑150 (MQ=255) aCCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACAGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCaaa > 2:2797465/1‑150 (MQ=255) ccGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAAt > 2:3387477/1‑150 (MQ=255) aTCACCATGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAACGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATtctc < 2:174009/150‑1 (MQ=255) cacaAAGTTCTGACGTGGGTCGCTT‑CTTTGAACCCCAGACAAAAAAAGGCGGGCTTTCCACCGACACGCGCCCGGATGGCACTAAAGTCGACTAACTTAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTg < 2:133035/150‑1 (MQ=255) aCCAATTTCTTATGTCGGTCGATT‑CTTTGAAACCCAGTCATCAAATGGCGGGCGTTACACCGTCACGCTCCCGTATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTgg < 2:3723488/150‑1 (MQ=255) aaGTTCTGAAGTCGGTCGCTT‑CTTTGTAACCCAGTCATCAAAAGGCGGGCGTTAAACCGTCACGCTCCCCGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATtctcgtgcac > 1:2463035/1‑144 (MQ=255) aaGTTCTGAAGTCGGTCGCGT‑CTTTTAAACCCAGTCATCAAAAGGCGGGCGTTACACCCTCACGCTCCCGGATGGCACTAAAGTCGAAGAACAGAACAAAGCGACCGCCGCGATTATGGTCCCGTTCGACAGCCTCAAATTCTCTGGCaa > 1:427047/1‑150 (MQ=255) aGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAATGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAAc < 2:3862585/150‑1 (MQ=255) cTGAAGTGGGTCGCTT‑CTTTGAAACCCAGCCATCAATTGGCGGGCTTTACACCGTCACGCTCCGGGATGGCACTAAATTCGAAGAACTTAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACg < 1:1292539/150‑1 (MQ=255) cTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAATAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACg < 2:357345/150‑1 (MQ=255) aaGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAATGGCGGGCTTTACACCGTCACGCTCCGGGTTGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCa < 2:1122866/150‑1 (MQ=255) aGTGGGTCGCTT‑CTTTGAAACCCCGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAACGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACggtgc < 2:4780153/150‑4 (MQ=255) tcggtcgCTT‑CTTTGAACCCCAGTCATCAAATGGCGGGCGTTACACCGTCCCGATCCCGGATGGCACTAAAGTCGAAGAACTGAACAACGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACa < 2:241947/150‑1 (MQ=255) gtcgATT‑ATTTGAAACCCATTAATCAAAAGGCGGGCGTTACACCTTCACGCTCCCGTTTGGCACTAAAGTCGAAGAACTTAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGa < 1:2536455/150‑1 (MQ=255) gCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCg > 2:5161668/1‑150 (MQ=255) ctt‑cttTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGa > 1:1136825/1‑150 (MQ=255) ctt‑cttTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGa > 2:4438696/1‑150 (MQ=255) tt‑cttTGAAACCCAGTCATCAAATGGCGGGCGTTACACCGTCACGCTCCCGTATGGCACTAATGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGaa < 2:874263/150‑1 (MQ=255) tttGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCACCATGACCGAAGtc > 2:3071390/1‑150 (MQ=255) ttGAAACCCAGTCATCAAAAGGGGGGCGTTACCCCGTCACGCTCCGGGATGGCACTAACGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGtct < 2:1934117/150‑1 (MQ=255) tGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGtctc > 1:2820071/1‑150 (MQ=255) gAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTcc > 1:680097/1‑150 (MQ=255) aaCCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTa > 1:814133/1‑150 (MQ=255) cccAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATc < 2:2170788/150‑1 (MQ=255) cccAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATc > 1:514180/1‑150 (MQ=255) ccgcaatcaAACGGGGGGTGTAACACCTCCCCGCGCCGGGTTGCCAATAACGACTAAGACATTAACACCGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAg < 1:4079341/145‑1 (MQ=255) tcatcaAACGGCGGGCGTTACACCGTCACGCTCCCGGATGGCAATAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGtt < 1:2981712/150‑1 (MQ=255) atcaAACGGGGGGCGTTACACCGACACACTCCGGGTTGGCACTAACGTCGAAGAACTTAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGc < 1:318529/150‑1 (MQ=255) | GAGCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTT‑CTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGC > CP009273/1673232‑1673528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |