| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,547,821 | A→C | 6.8% | L241V (TTG→GTG) | eutR ← | eut operon transcriptional activator, AraC family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,547,821 | 0 | A | C | 6.8% | 933.7 / 4.8 | 331 | L241V (TTG→GTG) | eutR | eut operon transcriptional activator, AraC family |
| Reads supporting (aligned to +/- strand): ref base A (162/135); new base C (2/32); total (164/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 341 total aligned reads displayed.
TCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTCG > CP009273/2547674‑2547970 | tCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATc < 2:1850676/150‑1 (MQ=255) cAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCg > 1:5096175/1‑150 (MQ=255) aGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGa > 2:1002488/1‑150 (MQ=255) aGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGa < 2:3786558/150‑1 (MQ=255) cACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGACAGCAATCGACgg > 1:4699663/1‑150 (MQ=255) cACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACgg > 1:3751438/1‑150 (MQ=255) cgcgTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTa > 2:866616/1‑150 (MQ=255) cgcgTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTa > 1:4067805/1‑150 (MQ=255) cgcgTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTa > 1:1427143/1‑150 (MQ=255) gggTTCGGGCCAATGCCTAAATTAGCGTTAAACGGTTTTTGTTGCGTGGGGCGGCTTACATGCTGTTGATTACAAAAATCCAGCACCTACACCGTTTCGTACATGTTTTCCAGCACATATTCACGGGCGCGGTAAAGCAATCGACGGTaa < 2:2591940/148‑1 (MQ=255) tCGGGCCAATGCCTAAAATAGCTTTAAACGCTTTTTGTAGCGGGCGGGGGCTGACTTGCAGTTTTTTACACAAATCCAGCACCGTCACGGGTTGGGACATTTTTTCCAGCAATTATTCCCGGGCGCGGGAAAGCAATCGACGGTAActct < 2:136844/150‑1 (MQ=255) ggggCCAATGCCTAAATTAGCGTGAAAGGGTTTTTGTTGGGTGGGGGGGCTGACTTGCTGTTGATTACACAAATCCAGCACCGTCACCGGTTGGGACATTTTTTCCTGCAAATATTCCGGGGCGCGGGAAAGCAATCGACGGTAACTCtg < 2:1490467/149‑1 (MQ=255) cGGGCAAATGCATAAATTAGCGTTAAACGCTTTTTGTAGCGTGCGGCGGATTACATGCAGTTGATTACAAAAATCCAGCACCGTCACCGTTTCGGAATTTTTTTCCAGCACTTATTCACGGGCGCGGTAATGCAATCGACGGTAACTCtg < 2:1489584/150‑1 (MQ=255) gCCAATGCCTAAAATAGCGTTAAACGCTTTTTGTAGCGTGCGGCGGCTGACATGCTGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCtgatg < 1:395628/150‑1 (MQ=255) aaTGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACt > 2:2351671/1‑150 (MQ=255) aaTGCATAAACTAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACt < 2:4579391/150‑1 (MQ=255) cTAAAATAGCGTGAAACGCTTTTTGTAGCGTGCGGCGGCTGAAATGCATTTTATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATACACGGGCGCGGGAAAGAAATCGACGGTAACTCTGATGACTGATGc < 2:4638027/150‑1 (MQ=255) cTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGc > 2:140427/1‑150 (MQ=255) tAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCt > 2:3501742/1‑150 (MQ=255) tAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCt > 2:3607892/1‑150 (MQ=255) aaaaTAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAAGCCCGCACCGTCACCGGTTCGGACATGATTTCCAGCACATATGCCCGGGCGCGGGAACGCAATCGACGGTAACTCTGATGACTGATGCtt < 2:1077166/150‑1 (MQ=255) aaaTAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCttt > 1:44583/1‑150 (MQ=255) tAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTccg > 1:555159/1‑150 (MQ=255) aGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTccgc > 1:4919280/1‑150 (MQ=255) aGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTccgc > 1:3813057/1‑150 (MQ=255) gTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGt > 1:2411359/1‑150 (MQ=255) tGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTc > 1:3218884/1‑150 (MQ=255) aaCGCGTTTGGTAGCGGGGGGCGGCTGACATGCATTTGATTACACAAAGCCAGCCCCGTCCCCGGTTCGGACATGTTTGCCAGCACATATCCACGGGCGGGGTAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCAcc < 2:1746612/150‑1 (MQ=255) cgcgTTTTGTAGCGTGCGGCGGCTGACTTGCAGTTTATTACACAAATCCAGCACCGTCACGGGTTCGGACTTTTTTTCCAGCACATAGTCACGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCAt < 1:1129653/150‑1 (MQ=255) cgcgTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCAt > 1:3580987/1‑150 (MQ=255) cgTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTg < 2:2756087/150‑1 (MQ=255) gTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTgg > 2:2981529/1‑150 (MQ=255) tttGTAGCGTGGGGCGGCTGACATGCTGTTGATAACACAAATCCAGCACCGTCACGGGTTCGGACTTGTTTTCCAGCAAATTTCCACGGGCGGGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGtt < 1:2873027/150‑1 (MQ=255) gTGGGGGGGATGACTTGCTGTTTATTACACAAATCCAGCACCGTCACCGGTTCGTACATGTTTTCCAGCACATATTCAGGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGcttct < 1:233445/150‑1 (MQ=255) gTGCGGCGGCTGACATGCAGTTGATTACCCAACTCCAGCACCGGCACGGGTTCGGACATGTTTTCCAGCACATAGTCCCGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGcttct < 2:2734043/150‑1 (MQ=255) ggcggcTTACATGATTTTGATTACACAAATCCAGCACGGTCACGGGTTCGGACATTTTTTCCAGCACATATTCACGGGCGGGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCa < 1:3494502/150‑1 (MQ=255) ggcggcTGACATGCAGTTTATTACAAAAATCCAGCCCCGTCACCGGTTCGGAATTTTTTTCCAGCAAATTTTCACGGGCGGGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCa < 1:2528164/150‑1 (MQ=255) ggcggcTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCa > 1:476461/1‑150 (MQ=255) ggcTGACATGCTGTTGATAACACAAATCCAGCACCGGCACCGGTTCGGACATTTTTTCCCGCCCATATTCACGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCa < 2:3474620/150‑1 (MQ=255) gcTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCAt > 1:3819546/1‑150 (MQ=255) cTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATg < 2:432426/150‑1 (MQ=255) tGACTTGCTGTTTATTACACAAATCCAGCACGGTCACCGGTTCGGACATGTTTTCCAGCACTTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATgg < 1:3881584/150‑1 (MQ=255) tGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATgg > 1:4865567/1‑150 (MQ=255) tGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATgg > 1:2235643/1‑150 (MQ=255) gACTTGCAGTTTATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGc < 2:3755714/150‑1 (MQ=255) aCATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGcc > 2:2838686/1‑150 (MQ=255) aTGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCAGTGGTTGCGCTTCTTCCAGCATGGcccc > 2:3913540/1‑150 (MQ=255) gctgTTGATTACACAAATCCAGCACCGTCACGGGTTCGGACTTTTTTTCCAGCAAATATTCACGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCa < 2:4955564/147‑1 (MQ=255) gCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCa > 1:2698508/1‑150 (MQ=255) aGTTTATTACACAAATCCAGCACCGTCACCGGTTCGGACATTTTTTCCAGCACATTTTCAGGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATc < 2:1455864/150‑1 (MQ=255) tGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGcc > 2:2009404/1‑150 (MQ=255) aTTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTCCCAGCACATATTCCCGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCAt < 2:2709065/150‑1 (MQ=255) acaAATCCAGCACCGTCACGGGTTCGGACATTTTTTCCAGCACATATTCCCGGGCGCGGTAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCa < 1:4477328/150‑1 (MQ=255) aaaTCCAGCACGGTCACCGGTTCGTACATGTTTTCCAGCAAATATTCCGGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCaaa < 2:3540368/150‑1 (MQ=255) aaaTCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCaaa > 1:3638701/1‑150 (MQ=255) aaTCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAAt > 1:3867391/1‑150 (MQ=255) aTCCCGCACCGTCACCGGTTCGGACTTGTTTGCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAAtt < 2:645955/150‑1 (MQ=255) aTCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAAtt > 2:909897/1‑150 (MQ=255) tCCAGCACCGTCACCGTTTCGTAAATGTTTTCCAGCACATATTCACGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTa < 1:772354/150‑1 (MQ=255) cctgCACCGTCACGGGTTGGGACAGGTTTTCCAGCACATATTCACGGGCGGGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTAt < 2:5224295/147‑1 (MQ=255) cAGCACCTTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCGTGGCCCCCATCGCCATTAGCAAATTATc < 2:3679590/150‑1 (MQ=255) cAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCAGTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATc > 2:2096664/1‑150 (MQ=255) gCACCGTCACCGGTTCGTACATGTTTTCCAGCACATTTTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATccc < 1:304247/150‑1 (MQ=255) cgccACCGGTGCGCCCAGGTTTTCCCCCACATCTTCACGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAg < 2:3110608/147‑1 (MQ=255) cGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAg > 1:214322/1‑150 (MQ=255) tCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCa > 1:2103810/1‑150 (MQ=255) cACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCAc > 1:1968827/1‑150 (MQ=255) aCCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACt > 1:3176484/1‑150 (MQ=255) aCCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACt > 1:4280759/1‑150 (MQ=255) ggTTGGGACTTGTTTGCCAGCACTTTTTCAGGGGGGGGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACtttt < 1:1098932/150‑1 (MQ=255) ttCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCg > 2:551783/1‑150 (MQ=255) tCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGc > 1:4423334/1‑150 (MQ=255) gACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACt < 2:3290787/150‑1 (MQ=255) cATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGc > 1:1373520/1‑150 (MQ=255) gTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAgg > 1:4170638/1‑150 (MQ=255) tttCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCt < 2:4067805/150‑1 (MQ=255) tttCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCt > 2:2072770/1‑150 (MQ=255) ttCCAGCACATATTCCCGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTg < 1:1161533/150‑1 (MQ=255) ccAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGAt > 1:3985681/1‑150 (MQ=255) ccAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGAt < 2:3046941/150‑1 (MQ=255) aGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATgg > 2:3575730/1‑150 (MQ=255) gCACATATTCACGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGga < 2:1963725/150‑1 (MQ=255) gCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGga < 1:5211416/150‑1 (MQ=255) cacaTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGgag > 1:2082608/1‑150 (MQ=255) acaTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGgaga > 2:5094729/1‑150 (MQ=255) acaTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGgaga > 2:2798106/1‑150 (MQ=255) acaTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGgaga < 2:2950648/150‑1 (MQ=255) acaTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTGTTCGCACTGCAGGCTGATGgaga > 2:4151123/1‑150 (MQ=255) caTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGAt > 1:1888878/1‑150 (MQ=255) tatTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGAttt < 2:2932575/150‑1 (MQ=255) tatTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGAttt > 1:1762573/1‑150 (MQ=255) ttCACGGGCGCGGGAAAGAAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTc < 1:1002488/150‑1 (MQ=255) gggCGCGGTAAAGAACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGAt < 1:3085160/150‑1 (MQ=255) gggCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGAt > 2:262939/1‑150 (MQ=255) gcgcGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATtc < 2:3176163/150‑1 (MQ=255) aGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAAc > 1:1266588/1‑150 (MQ=255) aGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAAc < 1:709649/150‑1 (MQ=255) aaTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTc > 2:3878997/1‑150 (MQ=255) aaTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTc > 2:1241306/1‑150 (MQ=255) aTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTCg > 1:2683887/1‑150 (MQ=255) | TCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTCG > CP009273/2547674‑2547970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |