| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,439,422 | G→T | 8.0% | I26I (ATC→ATA) | rplF ← | 50S ribosomal subunit protein L6 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,439,422 | 0 | G | T | 8.0% | 740.2 / 4.4 | 282 | I26I (ATC→ATA) | rplF | 50S ribosomal subunit protein L6 |
| Reads supporting (aligned to +/- strand): ref base G (102/142); new base T (24/14); total (126/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.16e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 284 total aligned reads displayed.
ACCATTGAGTTCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAG > CP009273/3439273‑3439570 | aCCATTGAGTTCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTg > 2:3387057/1‑150 (MQ=255) cATTGAGTTCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGAt < 2:2777480/150‑1 (MQ=255) gAGTTCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGta < 1:345464/150‑1 (MQ=255) gAGTTCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTACCTTTGATCGta > 1:2370976/1‑150 (MQ=255) tCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGtaataa < 1:919678/150‑1 (MQ=255) tCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGtaataa < 1:2367987/150‑1 (MQ=255) cagGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTCCGAGTCAGCTCGCCGTTTTTACCTTTGATAGTAATAAccag > 1:3781722/1‑148 (MQ=255) cagGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGtaataaacag > 1:2062622/1‑146 (MQ=255) agGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTTATCGTAATAACCTGa > 1:1138811/1‑150 (MQ=255) agGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGa > 2:563153/1‑150 (MQ=255) gCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCg < 1:4705668/150‑1 (MQ=255) aCGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGtt < 2:294163/150‑1 (MQ=255) aCGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGtt < 2:2044386/150‑1 (MQ=255) aCGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGtt < 2:3511689/150‑1 (MQ=255) cgcgcgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTg < 2:3572689/150‑1 (MQ=255) cgcgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGAt > 2:1764867/1‑150 (MQ=255) cgcgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTTCCTTTGTTAGTAATAACCAGAACCTTGAt > 1:2635047/1‑150 (MQ=255) cgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGAttt < 1:1062965/150‑1 (MQ=255) gTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCAGACCGTTGAttttt > 1:3933746/1‑150 (MQ=255) aCCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTAACTTTGATCGTAATAAACAGACCGTTGAtttttta > 1:1498487/1‑148 (MQ=255) ccAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACg < 1:1968270/150‑1 (MQ=255) ccTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCaa > 2:2624642/1‑150 (MQ=255) ccTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCATTGATCGTAATAACCTGACCGGTGATTTTTACGTcca > 2:3202457/1‑148 (MQ=255) cTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAAc < 1:2800997/150‑1 (MQ=255) cTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGAACGTTGATTTTTAAGTAAAc > 1:3370970/1‑150 (MQ=255) tgtgCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGGCAACg > 2:396017/1‑150 (MQ=255) tgtgCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCAGACCGTTGATTTTTAAGTCAACg > 2:24558/1‑150 (MQ=255) tgtgCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTAACTTTGATCGGAATAACCTGACCGTTGATTTTTACGTAAACg > 2:25795/1‑150 (MQ=255) ccAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGc > 1:4346293/1‑150 (MQ=255) cGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTAAGTCAAAGCCGGCAGGaa > 2:3609027/1‑150 (MQ=255) gTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGaac < 1:2892529/150‑1 (MQ=255) gCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTAACATTGATCGTAATAACATGACCGGTTATTTTTACGTCAACGCCCGCACGaacaaac > 1:4246939/1‑148 (MQ=255) aaCCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCg > 2:4627145/1‑150 (MQ=255) cgGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTTACTTTTTTCGTAATAACCTGACCGTTGTTTTTTTAGTGAACGCCGGCAGGAACAACCAACGGGGGTTTatc > 1:4830326/1‑148 (MQ=255) ggACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTTAATTTTATCGTAATAAACTTACCGGTGATTTTTTCGTGAAACCCCGCAGGACCAACCACCCGGGGTTTAGCa > 1:4072669/1‑150 (MQ=255) ggACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCATTGATGGTAAAAAACAGACCCTTGATTTTTACGTCAACGCCGGCACGAACAACCACCCGTGCGTTAgaa > 1:4199726/1‑148 (MQ=255) ccGAAGGTATGGTTATTATCTGCATTTTTAACTTCAACAGAATCGTTGATAGTACGAGTCAGCTCGCCGTTTTTACCTTTTATCGTAATAACCTGACCGTTGATTTTTACGTAAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAaca < 2:3909104/150‑1 (MQ=255) cGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTTACATTGATAGTAATAAACAGTCAATTTTATTTTTCGTCAAAGCCCGCAAGAACAACGACAGGTGCTTTATCaaaaa > 2:83891/1‑147 (MQ=255) aGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTAACTTTTATCGGAATAAACAGACCGATTATTTTTTAGTAAAACCCCGCACGAAAAAAGACCCGGGCATTAGAAACACcag > 1:4413852/1‑150 (MQ=255) aGGTCAGGGTATTATCTGCATGTTTAACGTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCCGGAACAACGACCGGTGCTTTAGCAACACgag < 2:788338/150‑1 (MQ=255) ggTCTGGGTATTATCTGCATGTTTAACTGCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCGGACCGTTGATTTTTACGTCAACGCCGGCCGGAACAACGACCGGTGCTTTAGCAACACgaga < 2:3357101/150‑1 (MQ=255) ggTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACgaga < 2:2410593/150‑1 (MQ=255) gTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCCGTGCTTTAGCAACACGAGAc > 2:103078/1‑150 (MQ=255) cAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATAGTAATAAACTGACCGTTTATTTTTAAGTAAAAGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACaa > 1:741528/1‑149 (MQ=255) cAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCATTTATAGTAATAAACAGACCGTTGATTTTTAAGTCAAAGCCCGCACGAACAAACACCCGTGCTTTAGCAACACGAGACaa > 1:5002470/1‑149 (MQ=255) gggTATTATCTGCATGTTTAACTACAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGACAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAttt < 2:361924/150‑1 (MQ=255) ttattatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACATTTGATCGTAATAACCTGACCGTTGATTTTTCCGTCAACGCCGGCAGGAACCACGACCGGTGCTTTAGCAACACGAGACAttttt < 2:97986/149‑1 (MQ=255) ttatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTAACTTTGTTAGTAATAACCAGACCGTTGATTTTTAAGTCAAAGCCCGCCGGAACAAACACCGGTGCTTTAGCAACACGAGACAtttttttc > 1:103856/1‑148 (MQ=255) ttatCTGAATTTTTAACTTCAACAGCATGGTTGAGAGTACGAGTCAGCTCGCTGTTTTTACCTTTTATCGTAATAACCTGACGTTTGATTTTTACGTAAACGCCGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTtcc < 2:3064293/150‑1 (MQ=255) tatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTTACTTTTTTAGTAATAAACAGAGCGTTTTTTTTTTAGTGAAAGCCGGGCGGTACAACCACCGGTGGTGTGTGAACACGAGCCCatttttggt > 1:3072262/1‑147 (MQ=255) tatCTGAATTTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCTTTTTTACCTTTGATCGTAATAACCTGACGTTTGATTTTTACGTCAACGCCGGCCGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTtcct < 1:4181017/150‑1 (MQ=255) atCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTTACTGTTATAGTAATAAACTGACCCTTGATTTTTAAGTCAACCCCCGCCGGAAAAACCACCCGGGCTTTAGCAACACCAGACAATTTTtactc > 1:4861483/1‑150 (MQ=255) cttcATTTTAAAATTCAACAGAATCGTTTTGAGTACGAGTCAGCTCGCCTTTTTTACATTTGATCTTAATAACCTGACGGTTTTTTTTTACGAAAACGCCGGAAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCg < 1:2006866/147‑1 (MQ=255) cTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCg > 2:373778/1‑150 (MQ=255) cTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCAGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGTCCGGTGCGTTAGCAACACGAGACATTTTTTCCTCCg > 2:2244267/1‑150 (MQ=255) cTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCATTGAGCGTAATAACCTGCCCGTTGATTTTTACGTCAACGCCGGCCGGAACAACGCCCGGTGCGTTAGCAACACCAGACATTTTTTccgccg > 2:4877712/1‑150 (MQ=255) aTGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCGTTAGCAACACGAGACATTTTTTCCTCCGATTa > 2:4204555/1‑150 (MQ=255) tttAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGc < 2:322858/150‑1 (MQ=255) tttAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTAACTTTTTTCGTAATAAACAGAACGTTGATTTTTAAGTCAACGCCCGCAGGAACAACCACCCGTGCTTTATCAACACCAGACAATTTTTAATACGATTATGc > 1:2759666/1‑150 (MQ=255) tAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTa < 2:4518277/150‑1 (MQ=255) tAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTAACTTTTATCGTAATAAACTGACCCTTGATTTTTACGTCAACGCCGGCAGGAACAACCACCGGTGCTTTATCAACACCAGACAATTTTTACTACGATTAGGCTa > 1:2762841/1‑150 (MQ=255) tAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTACCGTTGATCGTAATAACCAGACCGTTGATTTTTAAGTAAACGCCGGCAGGAACAACCACCGGTGCTTTAGCAACACGACACATTTTTTGATCCGGTTAGGCTa > 1:673723/1‑150 (MQ=255) tAACTACAACAGAATGGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACATTTGATCGTAATAACCTGACGGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTa < 1:2270116/150‑1 (MQ=255) aCTTCAACCTCATCGTTGAGATTACGAGTCTGCTCGCTGTTTTTACCTTTTATCGTAATAACCTGACGGTTGATTTTTACGCCAACGCCGGCAGCAACCACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACg < 1:528031/150‑1 (MQ=255) cTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTCCGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGt < 2:1558480/150‑1 (MQ=255) cTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGt > 2:1212529/1‑150 (MQ=255) aaCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCa < 2:1099882/150‑1 (MQ=255) aaCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCa < 2:1100381/150‑1 (MQ=255) aCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAg < 2:1138811/150‑1 (MQ=255) aCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAg > 2:2974541/1‑150 (MQ=255) aCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAg > 2:2424071/1‑150 (MQ=255) aGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCATTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCGCCGATTATGCTACGTAGCatat > 2:2531258/1‑150 (MQ=255) gCATCGTTGATATTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATa < 1:5176078/150‑1 (MQ=255) cATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTTACATTGATCGTAAAAACCAGACCCGTTATTTTTAAGTCAAACCCGGCAGGAACAACGACCCGTGCTTTATCAACACGAGACAATTTTTCCTCCGATTAGGCGACGTAGCAGATaa > 1:1938791/1‑150 (MQ=255) aTCGTTGCGTGTACGTGTCTGCTCGCCGTTTTTCCCTTGGATGGTAATACCGTGCCGGTGGATTTTTAGGTCACCGCCGGCCGGAACCACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAAt < 1:816997/150‑1 (MQ=255) cGTTGAGAGTACGAGTCAGCTCGCGTTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAAttt < 2:4176939/150‑1 (MQ=255) cGTTGAGAGTACGAGTCAGCTCGCCGTTTTTTACGTTTATCGTAATAAACATACCGTTTATTTTTAAGTGAACGCCGGCCGGAACCACGACCGGGGGTTTTGCAACACGAGACATTTTTTACGGCCATTTGTCTACGTAGCAGATAAatt > 1:3220180/1‑150 (MQ=255) cGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAAttt < 2:2887084/150‑1 (MQ=255) agagTACTAGCCAGCTCGCCTTTTTTACCTTTTATCTAAATACCCTGACTGTTTTTTTTTCCCACACCGCCGGCAGCAACCACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGcca < 1:1344583/150‑1 (MQ=255) gagTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGccac > 2:1646727/1‑150 (MQ=255) gTACGAGTCAGCTCGCGGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGccacca < 1:4266112/150‑1 (MQ=255) tACGAGTCAGCTCGCCGTTTTTACCGTTTATCGTAAAAAAAAGACCGTTGTTTTTTAAGTCAACCCCGGCAGGAACAACCACCGGTGCTTTAGCAACACGAGACATTTTTTACTCCGCTTAGGGTAAGTAGCAGATAATTTAGCCACCaa > 1:2383988/1‑150 (MQ=255) aGTCAGCTCGCCTTTTTTACGTTTGATCGTAATAACCTGACCTTTGTTTTTTCCGTCAACGCCGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGAcc < 1:2883035/150‑1 (MQ=255) gTCAGCTCGCCTTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCa < 2:1938893/150‑1 (MQ=255) gatCGCCTTTTTTAAATTTTATATTAATAACCTTACCTTTGATTTTTACTTCAACGCCGGAAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCt < 1:3489801/148‑1 (MQ=255) gCTCGCGGTTTTTACATTTTATCGTAATAACCTGACCGTTTATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCt < 2:1357384/150‑1 (MQ=255) gCTCGCCTTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCt < 2:4672779/150‑1 (MQ=255) gCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCt < 2:4000392/150‑1 (MQ=255) ccGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGgcgc > 2:4742791/1‑150 (MQ=255) cGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGgcgcg > 2:235118/1‑150 (MQ=255) tttttACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCt > 2:3784365/1‑150 (MQ=255) tACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCAc < 2:3466081/150‑1 (MQ=255) aCCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACg > 1:873849/1‑150 (MQ=255) aCCTGTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCCGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACg < 2:1420723/150‑1 (MQ=255) ccTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGa > 1:4496687/1‑150 (MQ=255) ccTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTAGCCACCAAGACCAGCCTGGCGCGCTGCACGa > 1:2674481/1‑150 (MQ=255) tttGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATc < 1:1246451/150‑1 (MQ=255) ttGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCa > 2:5162642/1‑150 (MQ=255) ttGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTACACGATCa < 2:2370976/150‑1 (MQ=255) tGATCGTAATACCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAg < 2:5002470/150‑1 (MQ=255) | ACCATTGAGTTCAGCAGGGCACGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAG > CP009273/3439273‑3439570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |