Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,822,339 A→C 15.5% Q12P (CAA→CCA) ‡ xanP → xanthine permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,822,3390AC15.5% 437.4 / 26.1 240Q12P (CAA→CCA) ‡xanPxanthine permease
Reads supporting (aligned to +/- strand):  ref base A (124/72);  new base C (39/4);  total (164/76)
Fisher's exact test for biased strand distribution p-value = 2.53e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 244 total aligned reads displayed.

TATATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822190‑3822488
                                                                                                                                                     |                                                                                                                                                     
tatataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCa                                                                                                                                                       >  1:2609823/1‑150 (MQ=255)
   ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAccc                                                                                                                                                    >  2:2077682/1‑150 (MQ=255)
   ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAcc                                                                                                                                                    >  2:4403333/1‑150 (MQ=255)
   ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAcc                                                                                                                                                    >  1:4639653/1‑150 (MQ=255)
   ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAcc                                                                                                                                                    >  1:382669/1‑150 (MQ=255)
   ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAcc                                                                                                                                                    >  1:385971/1‑150 (MQ=255)
      aaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGt                                                                                                                                                 <  2:4337437/150‑1 (MQ=255)
        aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGttt                                                                                                                                               >  1:1355694/1‑149 (MQ=255)
         aaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTgc                                                                                                                                              <  1:3219811/150‑1 (MQ=255)
         aaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTgc                                                                                                                                              <  2:4777870/150‑1 (MQ=255)
          aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTgcg                                                                                                                                             >  1:2505421/1‑150 (MQ=255)
                tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACt                                                                                                                                       >  2:5024863/1‑150 (MQ=255)
                   aTCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGGTTCGCAGAcaaaa                                                                                                                                    >  1:85696/1‑146 (MQ=255)
                    tctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCaaa                                                                                                                                   >  2:4701338/1‑150 (MQ=255)
                    tctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGAGCAGACTCaaa                                                                                                                                   >  2:3954420/1‑150 (MQ=255)
                      tcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTAGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAACCCGTGCGCACACACaaaaa                                                                                                                                 >  1:3506462/1‑149 (MQ=255)
                        aTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAg                                                                                                                               >  2:2612523/1‑150 (MQ=255)
                          ttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACACAAAAAAGCg                                                                                                                             >  2:4603715/1‑150 (MQ=255)
                             aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACATCGAAc                                                                                                                          >  2:1217691/1‑150 (MQ=255)
                             aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGGTGCGCAGACTCAAAAAACCGAAc                                                                                                                          >  1:1867645/1‑150 (MQ=255)
                                atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGCCTGCCCCGACTCAAAACACCGaccaga                                                                                                                       >  1:4204571/1‑145 (MQ=255)
                                atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGa                                                                                                                       >  2:5107280/1‑150 (MQ=255)
                                      aTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTGCGCAGACAAAAAACAACCAACAGAATTaac                                                                                                                 >  1:3227105/1‑148 (MQ=255)
                                      aTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAcc                                                                                                                 >  2:3313930/1‑150 (MQ=255)
                                        gAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGCGCAGACTCAAAAAAACCAACAGATTTAccct                                                                                                               >  1:3165132/1‑148 (MQ=255)
                                            aTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTTCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTg                                                                                                           >  2:2267046/1‑150 (MQ=255)
                                             tgtgGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGATACCACGGTATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGa                                                                                                          <  2:3757075/150‑1 (MQ=255)
                                                 gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCCAACAGATTTACCGTCTTGAAGAt                                                                                                      >  2:1734812/1‑150 (MQ=255)
                                                 gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGAt                                                                                                      >  2:1734452/1‑150 (MQ=255)
                                                    aaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGt                                                                                                   >  2:217952/1‑150 (MQ=255)
                                                     aCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGGTGCGCAGACCCAAAAAAACCAACAGATTTAACCCCATGAAGATAGTc                                                                                                  >  1:4182555/1‑150 (MQ=255)
                                                       gTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccg                                                                                                >  2:3457604/1‑150 (MQ=255)
                                                        tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTGGCGCAGACACAAAAAACCCACCAGATTTAACGTCATGAAGATCCTccgc                                                                                               >  1:4436069/1‑150 (MQ=255)
                                                         ttGCTTTTCTCTTTCGGTCAGCTACAATGCCCGCTTGGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCCGAAAATGCGCAACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccgcc                                                                                              <  2:4861181/150‑1 (MQ=255)
                                                          tGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCCCTTTCGCAGACACAAAAAAGCCAACTTATTTAACCACTTTTATATAGTccgccg                                                                                             >  1:1820189/1‑150 (MQ=255)
                                                          tGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACACAAAAAAGCGAACAGATTTTCCGTCTTGAAGATCGTacgccc                                                                                             >  2:3953939/1‑149 (MQ=255)
                                                             ttttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCGTGAAGATCGTCCGCCGCtt                                                                                          >  2:874018/1‑150 (MQ=255)
                                                               ttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTcc                                                                                        >  1:3402272/1‑150 (MQ=255)
                                                                 ctctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTGCGCAGACACAAAACCCCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTccac                                                                                      >  2:2206044/1‑148 (MQ=255)
                                                                  tctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCa                                                                                     >  2:5186604/1‑150 (MQ=255)
                                                                  tctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCa                                                                                     >  2:4921549/1‑150 (MQ=255)
                                                                  tctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCa                                                                                     >  2:4920514/1‑150 (MQ=255)
                                                                  tctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCa                                                                                     >  2:4805159/1‑150 (MQ=255)
                                                                     ttCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGGTGCGCCGTCTAAAAAAAGCGAACTGCTTTACCGTCTTTTAGATCGTCCGGCGCGTCCACAAAc                                                                                  >  2:2648453/1‑150 (MQ=255)
                                                                      tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCCACCGGGTGCGCCGACACAAAAAAACGAACACAGTTAGAGAGATGTAGATAGTCCGCCGCGGCCTCAAAca                                                                                 >  1:3073713/1‑149 (MQ=255)
                                                                      tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCGAACTGAGTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAAcc                                                                                 >  2:1832369/1‑150 (MQ=255)
                                                                      tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGGTGCGCAGACACAAAAAAGCGAACAGATTTACCCGCGTGAAGATCGTCCGCCCCTGCCACCAAcc                                                                                 >  1:4515236/1‑150 (MQ=255)
                                                                      tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcc                                                                                 >  2:2932643/1‑150 (MQ=255)
                                                                      tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcc                                                                                 >  2:2576295/1‑150 (MQ=255)
                                                                       cGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATAGTACGCCGCTTCCACAAAccc                                                                                >  1:839248/1‑150 (MQ=255)
                                                                       cGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTAACGGCTTGAAGATCGTCCGCCGCGTCCTCAAAccc                                                                                >  1:1291887/1‑150 (MQ=255)
                                                                          tCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACACAAAAAAGCCAACTGATTTACCCTAGTGAAGATCGTCCGCCGCGTCCACAAACCCAGt                                                                             >  2:24807/1‑150 (MQ=255)
                                                                           cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCTCAAAACCAGtt                                                                            >  2:4532588/1‑150 (MQ=255)
                                                                               tAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgcc                                                                        <  2:5172783/150‑1 (MQ=255)
                                                                               tAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgcc                                                                        >  2:1055510/1‑150 (MQ=255)
                                                                                aaaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccg                                                                       >  2:4150144/1‑150 (MQ=255)
                                                                                   aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCt                                                                    >  2:5239927/1‑150 (MQ=255)
                                                                                    tGCCCGCTTTGCTACCACGGGATTTTTTTCGATGTGTGTTTCCACCCTCGTGTCAGAAATTGCGCAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTg                                                                   <  2:1963830/150‑1 (MQ=255)
                                                                                     gCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCCACCCGGTGCGGAGACTCAAAAAAGCGAACAGATTTTACGTCGTTTAGATAGTCCGCCGCGTCCTCAAACCCAGTTTTGCGCCTGt                                                                  >  1:987837/1‑150 (MQ=255)
                                                                                     gCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACACAAAAAAACGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCGTCCAAAAAACCCGGTTGGCGCCGGt                                                                  >  1:2386418/1‑150 (MQ=255)
                                                                                       ccGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTGCGCAGACACAAAACACCCAACAGATGTACCCGCGTGAAGAACGTCCGCCGCATCCTCCAACCCACGTTGCCGCCGGTCa                                                                >  1:2317678/1‑150 (MQ=255)
                                                                                        ctcTTTGCTACCTCGGTTTTGTTTTGGTTTTCGGTTACCACCCTCGAGCCATAAATTGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAg                                                               <  1:2063502/148‑1 (MQ=255)
                                                                                         gCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAACCGTTTCGCAGACACAAAAAAACCAACATAATTAACCTCTTTAATATCGTACCCCGCGTACTCAAAACCTGTTTTCCGCCAGTCAGc                                                              >  1:5221030/1‑150 (MQ=255)
                                                                                          ctgtGCTACCTGGGGTTTGTTTTCGATGTCTGTGACCCCCCTCGCGTCAGAAATGGCGCACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCa                                                             <  1:1721006/147‑1 (MQ=255)
                                                                                             tGCTACCAGGGGTTTGTTTTGGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATct                                                          <  2:2211877/150‑1 (MQ=255)
                                                                                                tACCACGGTATTTTTTTCGTTGTCTTTTTCCTCCCTCGAGTCAGAAATTGCGCAAGCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGACAGCATctgct                                                       <  2:3931696/150‑1 (MQ=255)
                                                                                                tACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgct                                                       <  2:5157265/150‑1 (MQ=255)
                                                                                                 aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCCCCCCGTTGGGCACACACAAAACAACCAACAGAATTAACGAAGTGAAGATACTCCGCCGCAGCCACAAACCCACGTTTCAGCCAGTCAGCAAcagctg                                                      >  1:1005327/1‑150 (MQ=255)
                                                                                                 aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTTCGCAGACGCAAAAAACACAACAGATATAACCTATTTAATATCGTCCCCCCCATCCACAAACCCAGTTTTCCGCCAGTCACCaacagcag                                                      >  1:4593644/1‑143 (MQ=255)
                                                                                                 aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGGTGCGCAGACTCAAAAAAGCGAACAGATTTAACCTCTTGTAGATAGTCCGCCGCTTCCACAAACCCGGTTTTCCGCCGGTCAGCAActgctg                                                      >  1:196361/1‑150 (MQ=255)
                                                                                                 aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGGTGCGCAGACAAAAAAAACCGAAAATATTTAACGTCTTTAAGATCGGCCGCCCCGTCCACAAAACCCGTTTTACGCCAGTCAGCATctgctg                                                      >  1:1488436/1‑150 (MQ=255)
                                                                                                 aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTATTGAAGATCGTCCGCCGCTTCCTCAAACCCAGTTTTCCGCCTGTCAGCATctgctg                                                      >  1:1640301/1‑150 (MQ=255)
                                                                                                 aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGCGCCGACTCAAAACAACCAACAGATTTAAAGAATTTAAGATAGTCCGCCCCTTCCACAAAACCAGTTTTCCGCCGGTCAGCaaattctg                                                      >  1:2271747/1‑143 (MQ=255)
                                                                                                 aCCACGGGATTGTTTTCGAGGTCTGTTTCCACCCACGAGTCACAAAAGGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgctg                                                      <  2:146388/150‑1 (MQ=255)
                                                                                                  ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATAGTCCGCCCCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTgg                                                     >  2:1877887/1‑150 (MQ=255)
                                                                                                  ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGCTTGCGCAGACACAAAACAACCAACAGATTTACCGTCTTGAATATAGTCCGCCGCGTCCTCAAAACCGGGTTGCCGCCAGTCAGCAACTTCTgg                                                     >  1:3707251/1‑150 (MQ=255)
                                                                                                   ccggggTTTGTTTTCGTTGTCGTTTACCACCCTCGAGCAATAAATGGCGCACCGGGTCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGc                                                    <  1:2908501/147‑1 (MQ=255)
                                                                                                    aCGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAAATGATTTACCGTCTTGAAGCTCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCCGCATCTGCTGGCg                                                   >  2:3815852/1‑150 (MQ=255)
                                                                                                      gggATTGTTTTCGCTGTCTGTTGCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCCAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                 <  2:2595927/150‑1 (MQ=255)
                                                                                                      gggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                 <  2:4626764/150‑1 (MQ=255)
                                                                                                        gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCAGCTGGCGATGt                                               >  2:1798210/1‑150 (MQ=255)
                                                                                                           tGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCg                                            <  2:3600094/150‑1 (MQ=255)
                                                                                                                 cGATGTCTGTTACCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCgg                                      <  1:3470370/150‑1 (MQ=255)
                                                                                                                   ttGTCTGTGGCCCCCCTCGAGTCAGAAACTGCGCACCGGGGGGCGCAGACTCAAAACAGCGAACTGCTTGACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTg                                    <  2:4136354/149‑1 (MQ=255)
                                                                                                                   aTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAAAAGAGAACTGATTTTCCGTCTTGAAGATCGTCCGCCGCTTCCACAAACCCGGTTTGGCGCCTGTCAGCAACTGCTGGCGATGTTCGTTGCGGTg                                    >  1:4923265/1‑150 (MQ=255)
                                                                                                                   aTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTTCGCAGAAACAAAAAAACGAACGTATTTAACGTCATGAAGATCGTCCGCCCCGTCCTAAAAACCAGTTTTCCGCCAGTAAGCATCATCTTGCGATGTTCGTTGCGGTg                                    >  1:4923055/1‑150 (MQ=255)
                                                                                                                        tGTTACCCCCCTCGAGAAATAAAATGCGAAACGGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCAc                               <  1:1118359/150‑1 (MQ=255)
                                                                                                                        tGTTACCACCCTCTAGTCATAAATTGCGCACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCAc                               <  1:2449968/150‑1 (MQ=255)
                                                                                                                              cACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgc                         <  2:3142960/150‑1 (MQ=255)
                                                                                                                                 ccTCGAGTCAGAAAATGCTCAAGCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCt                      <  2:5087640/150‑1 (MQ=255)
                                                                                                                                 ccTCGAGTCAGAAAATGCGCAACCCGTTGCGCAGACTCAAAACATCGCACAGATTTAACGTCTTGAATATAGTACCCCGCGTCCTCAAAACCAGTTTTGCGCCTGTCAGCAACAGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcgcg                      >  1:2001517/1‑149 (MQ=255)
                                                                                                                                        tCAGAAAATGCGCAACCGGTTTCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCAGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATc               >  2:327277/1‑150 (MQ=255)
                                                                                                                                         cAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCt              <  2:2756059/150‑1 (MQ=255)
                                                                                                                                         cAGAAAATGCGAAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCt              <  2:131157/150‑1 (MQ=255)
                                                                                                                                          aGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg             <  2:2990739/150‑1 (MQ=255)
                                                                                                                                           gAAAATGCGCCACCCGTTGCGCAGACACAAAACAGCGAACTGATTTAACGTATTGAAGATAGTCCCCCGCATCCACAAACCCGGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGc            >  2:2636519/1‑150 (MQ=255)
                                                                                                                                             aaaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa          >  2:831793/1‑150 (MQ=255)
                                                                                                                                               ttGCGCAACCGTTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAgg        <  1:2777716/149‑1 (MQ=255)
                                                                                                                                                   gcAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCt    >  1:743974/1‑150 (MQ=255)
                                                                                                                                                     aaCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg  >  1:4711541/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TATATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822190‑3822488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑