| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,603,125 | A→C | 7.6% | T300P (ACG→CCG) | yjjU → | putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,603,125 | 0 | A | C | 7.6% | 721.3 / 3.4 | 274 | T300P (ACG→CCG) | yjjU | putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base A (85/157); new base C (28/4); total (113/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.27e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 279 total aligned reads displayed.
AGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCC > CP009273/4602976‑4603273 | aGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCa < 1:4827900/150‑1 (MQ=255)aGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCa < 1:3461128/150‑1 (MQ=255)aGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCa < 2:4085828/150‑1 (MQ=255) cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACg < 1:3897986/150‑1 (MQ=255) cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACg < 2:1647546/150‑1 (MQ=255) aaTTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACTCGCCACgg > 2:3549804/1‑150 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGtt > 1:368401/1‑150 (MQ=255) tATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTgg > 2:4910727/1‑150 (MQ=255) ttGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGGTGGCa > 2:26070/1‑150 (MQ=255) gagaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAg < 2:570436/150‑1 (MQ=255) gaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCt < 2:2988193/150‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAtt < 1:1127836/150‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAtt < 1:1815161/150‑1 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTa < 2:3894627/150‑1 (MQ=255) caccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACGAGCCACCGGTGGCCAGCCAGTaa > 1:5138191/1‑150 (MQ=255) accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTAGCCACCGTTGGCAAGCTATTaaa > 1:3608423/1‑149 (MQ=255) gggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTGCTAGCCACCGTTGGCAAGCTATTAACGGa > 1:4269038/1‑150 (MQ=255) gggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTTATCGCCCCCGGTGGGAAGCGAATAACAGa > 1:4994861/1‑150 (MQ=255) gggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTAGCCACGGTTGGCAAGCTATTAAATGa > 1:3791732/1‑150 (MQ=255) cAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTGCTAGCCCCCGTTGGGACGCGATTAACAGtaaa > 1:4561098/1‑150 (MQ=255) aaGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCACGGTTGGCCAGCGATTAACTGaaaaa > 2:5007031/1‑150 (MQ=255) aaGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGaaaaa < 1:723026/150‑1 (MQ=255) aaGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGaaaaa < 1:3987220/150‑1 (MQ=255) gCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGcgcc < 1:3944915/150‑1 (MQ=255) cGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGcgccg < 2:3828896/150‑1 (MQ=255) ggATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGcgccgc > 2:2956017/1‑150 (MQ=255) ttCGAATTTTATCCGCCGAAGCCATTACATATTATCGCGCTTGGCAGTCGGATTCCGGCGTTGCGTGAATAATATAAACTTGGGCTTTTATGCGGTCGTTATTTCCTCGCCACGTTTTGCAAGATATTAACTTAAAAAGCGCCGCTTAcc < 1:2485964/150‑1 (MQ=255) ttCGAAATTTATCCGCCGAAGCAATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTTAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAGGGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTAcc < 1:4716822/150‑1 (MQ=255) cGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCg < 2:4698115/150‑1 (MQ=255) aaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCa < 2:1473296/150‑1 (MQ=255) aaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCa < 2:2272435/150‑1 (MQ=255) aaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTGGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCa < 2:1620002/150‑1 (MQ=255) ttATCCGCCGAAGCCATTACTTAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCCCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCt < 2:2205441/150‑1 (MQ=255) tATCCGCCGAAGCCATTACTTAGTATCGCGCTTGGCTGTCGGATTCCGGCGCTGCGTGAATAATATAAACTTGGGCGTTTATGCGGTCTTTATTTCCTCGCCACGGTTGGAAAGATATTAACTGAAAAAGCGCCGCTTACCCGCCATCTg < 1:2111261/150‑1 (MQ=255) tATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTg < 2:858390/150‑1 (MQ=255) ccgccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCGATTAACAGAAAAAGCGCCCCTTACCCGCCAACAGGTg > 2:3692876/1‑150 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCa > 2:278400/1‑150 (MQ=255) cgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCCCGGGTGGCAAGCTATTAAAAGAAAAAGCGCCGCTTAACCCCCAACGGGGGCCAg > 2:2260235/1‑150 (MQ=255) cgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTAGCCACCGTTGGCCAGCGATTAAATGAAAAAGCGCCGCGTAACCCCCAACTGGTGCCAg > 1:2965528/1‑150 (MQ=255) aaGCCATTACATCGTATCGCGCTGGGCAGTCGGATGCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCGCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtg < 2:1330608/150‑1 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtg < 2:4497836/150‑1 (MQ=255) cATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGa < 1:3423832/150‑1 (MQ=255) cATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGa < 1:800291/150‑1 (MQ=255) cATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGa < 2:923438/150‑1 (MQ=255) aTTACATTGTATCGCGCTTGGCTGTCGGATTCGGGCGGTGCTTGAAGACTATAAACTTGGGCGTTTATGCGGTAATTATTTCCGCGCCACGGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGAc < 1:3699619/150‑1 (MQ=255) aTTACATAGTATCGCGCTTGGCAGTCGTATTCCGGCGCTGCGTTAAGAATATAAACTTGGGCGTTTATGCGGTAATTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGAc < 1:4302713/150‑1 (MQ=255) aTTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAAATGAAAAAGCGCCGCTTAACCGCCAACGGGTGCCAGTGGTGAc > 2:1592284/1‑150 (MQ=255) ttACATTGTATCGCGGTGGGCTGTGGTTTTCCGGCGCTGCGTTAAGAATATAAACTTGGGCTTTTTTGGGGTCGTTTTTTCCTCGCCAGGGTTGGAAAGATATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACg < 1:2673887/150‑1 (MQ=255) ttACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACg < 1:4762364/150‑1 (MQ=255) ttACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACg < 1:2140964/150‑1 (MQ=255) tACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCACGCCCCCGTTGGCAAGCGATTAACTGAAAAAGCGCCGCTTACCCCCCAGCGGGTGCCAGTGGTGACGc > 2:4093952/1‑150 (MQ=255) aCATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTAAACGCCCCCGTTGGGCAGCTCTTTAAAGAAAAAACGCCCCATACCCCCCCACAGGTTCCAGTGGTGaaccc > 1:3295959/1‑146 (MQ=255) cATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCg < 2:3293388/150‑1 (MQ=255) cATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCg < 2:3282029/150‑1 (MQ=255) cATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACCGTTGGCAAGCTATTAACTTAAAAACCGCCCCTTAACCCCCAACTGGTGCCAGTGGTGACGCCg > 2:3987464/1‑150 (MQ=255) aTAGTATCGCGCTTGGCAGTCGGTTTCCGGCGCGGCTTGAAGACTATAAACTTGGGCGTTTCTGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCgg < 1:2368146/150‑1 (MQ=255) aGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCGCGCCACGGGTGGCAACCGATTAACGGAAAAAGCGCCGCTTACCCGCCCTCTGGTGCCAGTGGTGACGCCGGaa > 2:1235154/1‑150 (MQ=255) tATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGATATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATc < 1:5189252/150‑1 (MQ=255) tATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCACGCCCCGGTGGGCAAGCGAATAACGGAAAAAGCGCCGCATACCCCCCAACGGGTGCCCGTGGGGACGCCCGAATc > 2:1128600/1‑150 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGa < 2:5078393/150‑1 (MQ=255) cgcgCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAt < 2:3245263/150‑1 (MQ=255) gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGAATATAAACTTGGGGGTTTATGCGGTCGTTATTCCCTCGCCACGGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAtt < 1:4066419/150‑1 (MQ=255) gcgcTGGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAtt < 1:2241540/150‑1 (MQ=255) cTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCCCGGGTGGCAAGCGATTAACTGAAAAAGCGCCGCTTACCCGCCCAATGGTGCCAGTGGTGACGCCGGAATAGAtttta > 2:3341501/1‑147 (MQ=255) ggCAGTCGGATTCCGGCGCTGCGTGAAGACTAAAAACTGGGGCTTTTATGCGGTCGTTATTCCCTCGCCACGGTGGGCAAGCTATTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCAtt < 1:3229239/150‑1 (MQ=255) gCAGTCGGATTCCGGCGCTGCGTTAAGACTATAAACTTGGGCTTTTTTGGGGTCGTTATTACCTCGCCACGGTTGCCAAGATATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTc < 1:989850/150‑1 (MQ=255) aGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCCCGGTTGGCAAGCTATTAACAGAAAAAGCGCCCCTTACCCGCCATCTGGTGCCCGTGGTGACGCCGGCATCGAATGTCATTCCg > 2:2536832/1‑150 (MQ=255) tCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGcc < 2:532432/150‑1 (MQ=255) tCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGcc < 2:1908852/150‑1 (MQ=255) tCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTATTCCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGcc < 1:1944249/150‑1 (MQ=255) cGGATTCCGGCGCTGGGTTAATACTATAAACTGGGGGGTTTTTGCGGTCGTTATTTCCTCGCCACGGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCt < 1:1397818/150‑1 (MQ=255) ggATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAAATGAAAAAGCGCCGCGTACCCGCCAGCTGGTGCCAGTGGTGACGCCGGAATCGATTGTAATTACGCCTg > 2:2327489/1‑150 (MQ=255) ccGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCa < 2:4332340/150‑1 (MQ=255) gcgcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTc < 2:3587063/150‑1 (MQ=255) cgcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCg < 2:439967/150‑1 (MQ=255) cgcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCg < 2:1430274/150‑1 (MQ=255) gCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTGGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCaa < 1:2874173/150‑1 (MQ=255) cGTGAAGACTATAAAATTGGGCGTTTATGCGGTCGTTATTTCCACGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAAc < 1:2590594/150‑1 (MQ=255) ataatataAACTTGGGGTTTTTTGCGGTCTTTTTTTCCTCGCCACGGTTGGAAAGATTTTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATAc < 1:597138/146‑1 (MQ=255) cTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCt < 2:2458875/150‑1 (MQ=255) taAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGt < 2:4618090/150‑1 (MQ=255) aaaCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGtt < 2:4905572/150‑1 (MQ=255) aaCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTg < 1:1837075/150‑1 (MQ=255) tGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGa < 2:796677/150‑1 (MQ=255) gggCGTTTATGCGGTCGTTATTTACTCGCCACGGGTGGCAAGCTATTAACAGAAAAAGCGCCGCTTAACCCCCAAATGGTGCCAGTGGTGACGCCGGAATCGATTTTCATTCCCCCAGCGCCAGTCGCCAAACATACGCAGGTTGCCGaa > 2:1702984/1‑150 (MQ=255) gTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGa < 1:4640991/150‑1 (MQ=255) tttGCGGTCTTTATTTCCTCGCCACGGTTGGAAAGATATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCg < 1:3586448/148‑1 (MQ=255) tGCGGTCGTTTTTTCCTCGCCAGGGTTGTCAAGATATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGAc < 1:1029795/150‑1 (MQ=255) cGGTCGTTATTTCCTCGCCAGGGTTGGAAAGCTTTTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGc < 1:3107134/150‑1 (MQ=255) tCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTcc < 2:4800550/150‑1 (MQ=255) aTTTCCTCGCCACGGTTGGCAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg < 2:2215816/150‑1 (MQ=255) ttCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCg < 2:1962929/150‑1 (MQ=255) ccTCGCCAGGGTTGGCAAGCTATTACCTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 1:4402689/150‑1 (MQ=255) ccTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 2:4936913/150‑1 (MQ=255) ccTCGCCACGGTTGGCAAGCTAGTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 2:4418640/150‑1 (MQ=255) cgcGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAAc < 2:316700/148‑1 (MQ=255) cGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGa > 2:2136864/1‑150 (MQ=255) gCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAc > 2:4182720/1‑150 (MQ=255) gCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAc > 1:1064827/1‑150 (MQ=255) ccACGGTTGGCATGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc < 2:4141853/150‑1 (MQ=255) | AGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCC > CP009273/4602976‑4603273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |